Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 6.2e-31 136.7 65 100.0
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 8.7e-25 116.3 84 75.0
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.6e-23 112.1 84 72.6
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 3.7e-23 110.9 84 70.2
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 4.8e-23 110.5 84 71.4
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 6.2e-23 110.2 84 71.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 6.2e-23 110.2 84 71.4
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 8.1e-23 109.8 83 69.9
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.4e-22 109.0 84 70.2
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.4e-22 109.0 84 70.2
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.4e-22 109.0 84 70.2
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.8e-22 108.6 84 70.2
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.8e-22 108.6 84 70.2
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.8e-22 108.6 84 70.2
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.1e-22 107.8 84 69.0
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 3.1e-22 107.8 84 69.0
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 3.1e-22 107.8 84 69.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 3.1e-22 107.8 84 69.0
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 4.0e-22 107.5 84 69.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 4.0e-22 107.5 84 69.0
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 4.0e-22 107.5 84 69.0
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 4.0e-22 107.5 84 69.0
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 5.3e-22 107.1 84 69.0
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 5.3e-22 107.1 84 67.9
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 6.9e-22 106.7 84 67.9
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 6.9e-22 106.7 84 69.0
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 6.9e-22 106.7 84 69.0
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 66.7
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 9.0e-22 106.3 84 67.9
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.2e-21 105.9 84 67.9
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.2e-21 105.9 84 66.7
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.5e-21 105.5 84 67.9
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 2.0e-21 105.1 84 66.7
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.0e-21 105.1 84 66.7
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 65.5
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 67.9
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 67.9
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 67.9
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 66.7
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 2.6e-21 104.8 84 67.9
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 3.4e-21 104.4 84 66.7
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 3.4e-21 104.4 84 66.7
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 3.4e-21 104.4 84 66.7
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 3.4e-21 104.4 84 66.7
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 3.4e-21 104.4 84 65.5
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 66.7
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 66.7
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 66.7
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 65.5
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 65.5
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 4.5e-21 104.0 84 65.5
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 1.0e-20 102.8 84 65.5
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.3e-20 102.4 84 66.7
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 1.7e-20 102.1 84 65.5
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 1.7e-20 102.1 84 65.5
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.7e-20 102.1 84 65.5
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.2e-20 101.7 84 66.7
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 2.2e-20 101.7 84 66.7
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.2e-20 101.7 84 64.3
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.8e-20 100.9 84 64.3
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.8e-20 100.9 84 64.3
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.9e-19 98.6 86 64.0
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.9e-19 98.6 101 58.4
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 2.5e-19 98.2 84 63.1
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 3.2e-19 97.8 52 92.3
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.2e-19 97.4 81 64.2
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.5e-18 94.4 52 88.5
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 4.6e-18 94.0 52 88.5
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.0e-17 92.8 52 86.5
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 5.1e-17 90.5 83 57.8
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 5.1e-17 90.5 74 64.9
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 5.1e-17 90.5 74 64.9
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 6.7e-17 90.1 84 58.3
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 8.7e-17 89.7 84 58.3
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.6e-15 85.5 84 54.8
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.1e-14 82.8 68 66.2
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 5.3e-14 80.5 81 56.8
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 4.5e-13 77.4 84 52.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.4e-11 72.4 65 60.0
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 1.4e-11 72.4 73 53.4
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.9e-11 72.0 62 62.9
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 5.5e-11 70.5 62 61.3
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 5.5e-11 70.5 62 66.1
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.0e-09 66.2 62 56.5
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 3.0e-09 64.7 62 56.5
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.6e-07 58.9 32 84.4
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 3.7e-07 57.8 74 44.6
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.4e-06 55.8 32 81.2
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 6.9e-06 53.5 48 60.4
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 9.0e-06 53.1 66 48.5


User provided reference genes

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