Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 2.0e-68 262.3 132 100.0
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 2.4e-53 212.2 131 80.9
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 3.0e-48 195.3 120 83.3
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 4.3e-39 164.9 131 69.5
BolC9t56683H Brassica oleracea HOM05D007458 ORTHO05D009533 1.4e-37 159.8 106 78.3
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 2.5e-26 122.5 94 63.8
BcaC02g10564 Brassica carinata HOM05D007458 ORTHO05D009533 6.1e-25 117.9 82 74.4
BolC5t32035H Brassica oleracea HOM05D007458 ORTHO05D009533 2.6e-23 112.5 75 77.3
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 8.2e-22 107.5 94 53.2
BcaC05g28700 Brassica carinata HOM05D007458 ORTHO05D009533 8.2e-22 107.5 68 77.9
BcaC05g27697 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-21 106.3 75 72.0
BcaC04g20906 Brassica carinata HOM05D007458 ORTHO05D009533 9.1e-21 104.0 77 70.1
BcaC06g35833 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-20 103.6 64 79.7
BcaC01g02125 Brassica carinata HOM05D007458 ORTHO05D009533 7.7e-20 100.9 80 61.2
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 7.7e-20 100.9 94 46.8
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-19 100.5 94 47.9
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-19 97.8 108 43.5
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-19 97.4 96 44.8
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 8.5e-19 97.4 94 44.7
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.1e-18 97.1 96 44.8
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-18 95.9 96 43.8
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-18 95.5 94 44.7
BcaC03g15848 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-17 93.2 54 83.3
BcaC04g20898 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-17 93.2 74 66.2
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 2.7e-17 92.4 94 42.6
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 4.7e-17 91.7 142 37.3
BcaC04g20664 Brassica carinata HOM05D007458 ORTHO05D009533 6.1e-17 91.3 55 81.8
BcaB03g16145 Brassica carinata HOM05D007458 ORTHO05D009533 8.0e-17 90.9 96 53.1
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-16 90.1 96 43.8
BcaB06g27201 Brassica carinata HOM05D007458 ORTHO05D009533 1.8e-16 89.7 66 62.1
BcaB06g26936 Brassica carinata HOM05D007458 ORTHO05D009533 3.9e-16 88.6 101 50.5
BcaC09g49039 Brassica carinata HOM05D007458 ORTHO05D009533 5.2e-16 88.2 54 81.5
BcaC04g20873 Brassica carinata HOM05D007458 ORTHO05D009533 8.8e-16 87.4 54 79.6
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-15 84.3 94 45.7
BcaB05g23673 Brassica carinata HOM05D007458 ORTHO05D009533 1.3e-14 83.6 72 61.1
BcaC01g02152 Brassica carinata HOM05D007458 ORTHO05D009533 1.3e-14 83.6 51 80.4
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-14 83.2 125 35.2
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-14 81.3 93 43.0
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-13 80.1 109 41.3
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-13 79.7 134 39.6
BcaC03g16530 Brassica carinata HOM05D007458 ORTHO05D009533 2.4e-13 79.3 44 88.6
BcaC03g17352 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-13 79.3 95 40.0
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 2.4e-13 79.3 92 43.5
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 7.0e-13 77.8 93 43.0
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 9.1e-13 77.4 120 40.0
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 1.2e-12 77.0 117 41.9
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-12 76.6 93 43.0
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-12 76.3 132 39.4
BcaC05g26694 Brassica carinata HOM05D007458 ORTHO05D009533 3.5e-12 75.5 74 54.1
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-12 75.1 93 43.0
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 5.9e-12 74.7 93 41.9
BcaC07g37469 Brassica carinata HOM05D007458 ORTHO05D009533 7.7e-12 74.3 44 86.4
C04p25680 Brassica napus HOM05D007458 ORTHO05D009533 1.0e-11 73.9 83 49.4
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-11 73.2 120 37.5
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-11 72.8 93 39.8
C05p50860 Brassica napus HOM05D007458 ORTHO05D009533 2.2e-11 72.8 83 48.2
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-11 72.4 79 45.6
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 2.9e-11 72.4 118 38.1
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-11 72.0 94 42.6
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-11 72.0 92 38.0
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-11 71.6 93 37.6
BcaC02g10773 Brassica carinata HOM05D007458 ORTHO05D009533 5.0e-11 71.6 55 72.7
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 5.0e-11 71.6 75 49.3
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 6.5e-11 71.2 109 39.4
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 8.5e-11 70.9 111 37.8
BcaB04g18216 Brassica carinata HOM05D007458 ORTHO05D009533 1.1e-10 70.5 65 56.9
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-10 70.5 108 33.3
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-10 70.1 92 38.0
BcaC04g20854 Brassica carinata HOM05D007458 ORTHO05D009533 3.2e-10 68.9 54 68.5
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-10 68.6 79 39.2
BcaB02g11513 Brassica carinata HOM05D007458 ORTHO05D009533 9.4e-10 67.4 77 45.5
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 9.4e-10 67.4 129 33.3
BcaB03g16648 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-09 67.0 118 39.0
BcaC02g10730 Brassica carinata HOM05D007458 ORTHO05D009533 1.2e-09 67.0 57 61.4
BcaC06g35835 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-09 67.0 83 37.3
BcaC01g02142 Brassica carinata HOM05D007458 ORTHO05D009533 3.6e-09 65.5 44 77.3
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-08 63.9 79 41.8
BcaB04g17718 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-08 63.5 52 59.6
BcaC01g02124 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-08 63.5 44 75.0
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-08 63.5 67 44.8
BcaB08g35088 Brassica carinata HOM05D009886 ORTHO05D009533 1.8e-08 63.2 62 58.1
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-08 63.2 79 41.8
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-08 62.4 74 43.2
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-08 62.4 90 38.9
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-08 62.4 74 43.2
BolC8t47803H Brassica oleracea HOM05D003835 ORTHO05D004930 3.0e-08 62.4 113 34.5
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-08 62.0 82 39.0
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 4.0e-08 62.0 94 35.1
BraA06t26729Z Brassica rapa HOM05D007458 ORTHO05D009533 4.0e-08 62.0 83 45.8
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-08 61.6 74 43.2
BcaB03g16163 Brassica carinata HOM05D007458 ORTHO05D009533 6.7e-08 61.2 53 54.7
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 6.7e-08 61.2 66 47.0
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 8.8e-08 60.8 78 41.0
Oeu022668.1 Olea europaea HOM05D002774 ORTHO05D000116 1.2e-07 60.5 84 38.1
BcaB07g33148 Brassica carinata HOM05D007458 ORTHO05D009533 2.0e-07 59.7 52 55.8
BcaC04g20791 Brassica carinata HOM05D024368 ORTHO05D009533 2.0e-07 59.7 81 53.1
BolC9t56675H Brassica oleracea HOM05D003835 ORTHO05D004930 2.0e-07 59.7 95 35.8
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 2.0e-07 59.7 91 38.5
BcaB05g23524 Brassica carinata HOM05D007458 ORTHO05D009533 3.3e-07 58.9 54 53.7
Oeu002338.1 Olea europaea HOM05D011150 ORTHO05D011451 3.3e-07 58.9 87 35.6
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-07 58.5 109 33.0
BcaB04g17858 Brassica carinata HOM05D010120 ORTHO05D009533 4.4e-07 58.5 53 54.7
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 5.7e-07 58.2 89 33.7
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-07 57.8 95 31.6
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 7.5e-07 57.8 130 30.8
BcaC02g10130 Brassica carinata HOM05D007458 ORTHO05D009533 7.5e-07 57.8 33 81.8
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 7.5e-07 57.8 84 34.5
Oeu022696.1 Olea europaea HOM05D002774 ORTHO05D000116 9.7e-07 57.4 85 34.1
Oeu052701.1 Olea europaea HOM05D002774 ORTHO05D000116 9.7e-07 57.4 82 35.4
Oeu051288.1 Olea europaea HOM05D002774 ORTHO05D000116 1.3e-06 57.0 89 33.7
Oeu063908.1 Olea europaea HOM05D002774 ORTHO05D000116 1.3e-06 57.0 87 34.5
BcaB06g26994 Brassica carinata HOM05D007458 ORTHO05D009533 1.7e-06 56.6 55 54.5
Oeu031116.1 Olea europaea HOM05D002774 ORTHO05D000116 1.7e-06 56.6 89 31.5
Oeu043654.1 Olea europaea HOM05D002774 ORTHO05D000116 1.7e-06 56.6 78 33.3
BcaC05g27762 Brassica carinata HOM05D007458 ORTHO05D009533 2.2e-06 56.2 44 68.2
Oeu046469.1 Olea europaea HOM05D002774 ORTHO05D000116 2.2e-06 56.2 89 33.7
BcaC03g16532 Brassica carinata HOM05D007458 ORTHO05D009533 2.8e-06 55.8 39 74.4
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 2.8e-06 55.8 83 36.1
Oeu048175.1 Olea europaea HOM05D002774 ORTHO05D000116 2.8e-06 55.8 82 35.4
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-06 55.5 62 41.9
BolC8t47304H Brassica oleracea HOM05D007458 ORTHO05D009533 3.7e-06 55.5 35 80.0
Oeu052961.1 Olea europaea HOM05D002774 ORTHO05D000116 3.7e-06 55.5 82 32.9
BcaC09g49628 Brassica carinata HOM05D003835 ORTHO05D004930 6.3e-06 54.7 94 36.2
Oeu033039.1 Olea europaea HOM05D002774 ORTHO05D000116 6.3e-06 54.7 82 36.6


User provided reference genes

Program Settings