Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 1.2e-142 510.0 280 100.0
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 1.3e-141 506.5 280 99.6
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 1.4e-124 449.9 280 90.7
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.4e-119 432.6 278 87.1
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 7.6e-118 427.6 293 84.0
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 1.7e-109 399.8 278 79.9
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 6.4e-109 397.9 278 80.2
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 3.2e-108 395.6 278 79.5
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.1e-105 387.1 280 77.1
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.4e-87 327.0 308 63.6
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 6.9e-87 324.7 329 62.3
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 1.8e-82 310.1 276 63.0
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.1e-68 264.2 198 75.3
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.1e-60 237.7 306 48.0
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 2.5e-60 236.5 303 48.2
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 4.7e-59 232.3 306 46.1
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 8.0e-59 231.5 288 50.0
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.8e-58 230.3 306 47.4
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 2.3e-58 229.9 306 45.8
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.0e-58 229.2 306 45.8
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 4.4e-57 225.7 304 48.0
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 5.7e-57 225.3 271 49.1
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 2.2e-56 223.4 285 46.7
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 1.1e-55 221.1 295 46.4
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 1.4e-55 220.7 266 49.6
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 2.4e-55 219.9 303 45.2
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 2.4e-55 219.9 306 46.1
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.1e-55 219.5 314 44.6
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 7.7e-54 214.9 305 45.9
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 1.0e-53 214.5 274 49.3
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 1.0e-53 214.5 280 48.6
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 5.0e-53 212.2 278 46.0
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 6.6e-53 211.8 307 43.6
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 4.2e-52 209.1 307 45.0
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 7.2e-52 208.4 305 44.3
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 4.0e-50 202.6 296 40.9
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.6e-49 199.9 299 43.5
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 5.7e-49 198.7 312 41.0
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 5.7e-49 198.7 306 41.5
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 7.5e-49 198.4 303 43.6
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 9.8e-49 198.0 305 40.7
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 1.7e-48 197.2 290 42.4
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.4e-47 194.1 294 39.8
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 2.4e-47 193.4 298 40.6
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 5.4e-47 192.2 304 41.8
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 9.2e-47 191.4 312 40.1
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.2e-46 191.0 357 36.7
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 2.7e-46 189.9 348 38.8
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 3.5e-46 189.5 294 41.8
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 3.5e-46 189.5 263 46.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 1.7e-45 187.2 337 39.5
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.3e-45 186.8 305 40.0
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 3.9e-45 186.0 305 40.0
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 5.0e-45 185.7 310 39.4
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 8.6e-45 184.9 304 41.8
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 8.6e-45 184.9 289 42.2
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 2.5e-44 183.3 304 40.1
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.3e-42 176.8 285 42.5
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.2e-41 174.5 291 40.2
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 2.6e-41 173.3 278 40.6
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 2.6e-41 173.3 277 39.7
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 9.8e-41 171.4 268 42.9
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 1.7e-40 170.6 301 38.5
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.1e-39 167.9 311 37.9
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.1e-39 167.9 311 37.9
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 3.2e-39 166.4 291 39.2
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 5.4e-39 165.6 151 60.9
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 8.6e-37 158.3 311 37.0
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.5e-36 156.8 135 66.7
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 2.1e-35 153.7 378 33.9
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 2.8e-35 153.3 216 45.8
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.2e-35 152.1 199 47.7
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 1.1e-34 151.4 286 37.8
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.0e-34 149.4 216 44.9
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 1.3e-32 144.4 280 36.4
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 2.2e-32 143.7 279 36.6
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 6.4e-32 142.1 303 36.0
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 8.3e-32 141.7 198 44.4
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 8.3e-32 141.7 224 41.5
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 4.1e-31 139.4 137 59.1
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 5.4e-31 139.0 343 32.4
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 1.6e-30 137.5 317 33.4
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 3.5e-30 136.3 225 40.0
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 4.6e-30 136.0 260 36.9
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 4.6e-30 136.0 123 61.8
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 6.6e-29 132.1 128 56.2
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 3.6e-27 126.3 142 54.9
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.1e-26 124.8 209 40.7
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 5.2e-26 122.5 258 33.3
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 1.5e-25 120.9 259 37.8
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 5.8e-25 119.0 128 50.0
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 9.9e-25 118.2 252 33.3
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 2.2e-24 117.1 278 35.6
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.2e-22 111.3 292 29.8
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 7.8e-22 108.6 161 43.5
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 4.3e-20 102.8 130 47.7
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 2.8e-19 100.1 135 40.7
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 1.4e-18 97.8 189 36.5
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 1.8e-18 97.4 131 43.5
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 6.8e-18 95.5 131 39.7
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 4.4e-17 92.8 278 28.4
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 5.8e-17 92.4 206 33.0
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 6.4e-16 89.0 224 32.1
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 9.3e-15 85.1 152 42.1
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 9.3e-15 85.1 216 32.4
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 5.1e-13 79.3 80 51.2
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 9.6e-12 75.1 132 36.4
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 1.3e-11 74.7 216 26.9
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.3e-11 74.7 120 35.0
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.4e-10 71.2 120 37.5
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 1.4e-10 71.2 70 52.9
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.2e-09 68.2 61 55.7
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 3.4e-09 66.6 64 56.2
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 5.8e-09 65.9 109 36.7
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 9.9e-09 65.1 48 66.7
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 2.9e-08 63.5 128 33.6
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 1.2e-06 58.2 88 44.3
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 3.5e-06 56.6 80 41.2
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 3.5e-06 56.6 94 39.4


User provided reference genes

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