Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32477H Brassica oleracea HOM05D004555 ORTHO05D005305 2.0e-124 449.1 232 100.0
A05p23860 Brassica napus HOM05D004555 ORTHO05D005305 1.7e-123 446.0 232 99.6
BraA05t21262Z Brassica rapa HOM05D004555 ORTHO05D005305 1.7e-123 446.0 232 99.6
BcaC05g27748 Brassica carinata HOM05D004555 ORTHO05D005305 1.4e-122 443.0 232 98.7
C05p37330 Brassica napus HOM05D004555 ORTHO05D005305 1.4e-122 443.0 232 98.7
BcaB03g13672 Brassica carinata HOM05D004555 ORTHO05D005305 2.2e-118 429.1 232 95.7
AL1G49880 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 8.0e-113 410.6 230 90.9
Sp1g29900 Schrenkiella parvula HOM05D004555 ORTHO05D005305 2.3e-112 409.1 230 92.2
AT1G35180 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 8.8e-112 407.1 230 90.4
Carub.0001s3280 Capsella rubella HOM05D004555 ORTHO05D005305 9.7e-111 403.7 230 89.6
Thhalv10001837m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 2.8e-110 402.1 230 89.1
CARHR288350 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.2e-108 396.7 230 88.7
BraA02t08192Z Brassica rapa HOM05D004555 ORTHO05D005305 1.6e-105 386.3 226 86.3
A02p31830 Brassica napus HOM05D004555 ORTHO05D005305 1.4e-104 383.3 226 85.4
AT1G35170 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 7.5e-103 377.5 230 86.1
BcaC03g17015 Brassica carinata HOM05D004555 ORTHO05D005305 1.8e-96 356.3 231 80.1
BolC2t11011H Brassica oleracea HOM05D004555 ORTHO05D005305 1.8e-96 356.3 231 80.1
Sp1g33840 Schrenkiella parvula HOM05D004555 ORTHO05D005305 6.1e-89 331.3 230 73.5
Thhalv10011751m.g Eutrema salsugineum HOM05D004555 ORTHO05D005305 8.9e-88 327.4 230 71.7
THA.LOC104812564 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 4.4e-87 325.1 227 69.6
AL1G52650 Arabidopsis lyrata HOM05D004555 ORTHO05D005305 2.2e-86 322.8 230 70.9
AT1G45010 Arabidopsis thaliana HOM05D004555 ORTHO05D005305 2.2e-86 322.8 230 70.9
A08p06280 Brassica napus HOM05D004555 ORTHO05D005305 2.2e-86 322.8 231 71.9
BraA08t32631Z Brassica rapa HOM05D004555 ORTHO05D005305 2.2e-86 322.8 231 71.9
BcaB04g17579 Brassica carinata HOM05D004555 ORTHO05D005305 2.9e-86 322.4 230 71.7
BcaC07g37280 Brassica carinata HOM05D004555 ORTHO05D005305 6.4e-86 321.2 231 71.4
C08p07100 Brassica napus HOM05D004555 ORTHO05D005305 6.4e-86 321.2 231 71.4
BolC8t47554H Brassica oleracea HOM05D004555 ORTHO05D005305 6.4e-86 321.2 231 71.4
Carub.0001s3550 Capsella rubella HOM05D004555 ORTHO05D005305 1.3e-83 313.5 230 69.6
THA.LOC104814152 Tarenaya hassleriana HOM05D004555 ORTHO05D005305 4.3e-82 308.5 227 69.2
QL02p009623 Quercus lobata HOM05D004555 ORTHO05D005305 3.1e-80 302.4 217 66.4
C02p49220 Brassica napus HOM05D004555 ORTHO05D005305 9.8e-79 297.4 217 73.3
Actinidia29808 Actinidia chinensis HOM05D004555 ORTHO05D005305 2.2e-78 296.2 222 64.9
Prupe.1G374200 Prunus persica HOM05D004555 ORTHO05D005305 3.7e-78 295.4 226 63.3
Rhsim07G0242300 Rhododendron simsii HOM05D004555 ORTHO05D005305 6.4e-78 294.7 223 66.8
Sc02g0005680 Simmondsia chinensis HOM05D004555 ORTHO05D005305 8.3e-78 294.3 222 64.0
CANSAT25G0954 Cannabis sativa HOM05D004555 ORTHO05D005305 1.4e-77 293.5 224 64.3
Rhsim07G0242900 Rhododendron simsii HOM05D004555 ORTHO05D005305 1.4e-77 293.5 218 67.0
Dinv39456 Davidia involucrata HOM05D004555 ORTHO05D005305 1.9e-77 293.1 221 64.3
Actinidia29807 Actinidia chinensis HOM05D004555 ORTHO05D005305 4.1e-77 292.0 222 63.1
QL02p009638 Quercus lobata HOM05D004555 ORTHO05D005305 5.4e-77 291.6 217 65.0
SGA_v2.0_scaffold201G41359 Striga asiatica HOM05D004555 ORTHO05D005305 7.0e-77 291.2 228 61.4
Lalb_Chr22g0354561 Lupinus albus HOM05D004555 ORTHO05D005305 9.2e-77 290.8 221 62.9
QL02p009656 Quercus lobata HOM05D004555 ORTHO05D005305 4.6e-76 288.5 217 64.5
Aqoxy5G01553 Aquilegia oxysepala HOM05D004555 ORTHO05D005305 1.0e-75 287.3 225 64.4
Solyc12g089230.2 Solanum lycopersicum HOM05D000012 ORTHO05D000567 1.0e-75 287.3 231 61.0
MSTRG.1250 Avicennia marina HOM05D004555 ORTHO05D005305 1.3e-75 287.0 222 63.1
ClCG08G014730 Citrullus lanatus HOM05D004555 ORTHO05D005305 1.3e-75 287.0 217 65.0
Lsat_1_v5_gn_4_117401 Lactuca sativa HOM05D004555 ORTHO05D005305 1.3e-75 287.0 229 62.9
Duzib093G2146 Durio zibethinus HOM05D004555 ORTHO05D005305 2.3e-75 286.2 216 63.0
Sopen12g031110 Solanum pennellii HOM05D004555 ORTHO05D005305 3.9e-75 285.4 228 61.8
arahy.Tifrunner.gnm1.ann1.MX0J1Q Arachis hypogaea HOM05D004555 ORTHO05D005305 5.0e-75 285.0 223 61.4
CAN.G847.6 Capsicum annuum HOM05D004555 ORTHO05D005305 5.0e-75 285.0 228 61.4
Cfa013876 Carpinus fangiana HOM05D004555 ORTHO05D005305 5.0e-75 285.0 218 63.8
PGSC0003DMG400015428 Solanum tuberosum HOM05D004555 ORTHO05D005305 5.0e-75 285.0 228 61.4
CsaV3_2G029030 Cucumis sativus L. HOM05D004555 ORTHO05D005305 6.6e-75 284.6 218 64.7
CARHR036190 Cardamine hirsuta HOM05D004555 ORTHO05D005305 8.6e-75 284.3 195 72.8
HanXRQChr09g0269571 Helianthus annuus HOM05D004555 ORTHO05D005305 8.6e-75 284.3 218 64.7
CiPaw.07G156800 Carya illinoinensis HOM05D004555 ORTHO05D005305 1.1e-74 283.9 217 63.1
FAN27G1022 Fragaria x ananassa HOM05D004555 ORTHO05D005305 1.9e-74 283.1 224 62.1
Medtr1g022950 Medicago truncatula HOM05D004555 ORTHO05D005305 2.5e-74 282.7 222 60.8
QL02p009603 Quercus lobata HOM05D004555 ORTHO05D005305 3.3e-74 282.3 220 61.8
CSS0029656 Camellia sinensis var. sinensis HOM05D004555 ORTHO05D005305 4.3e-74 282.0 221 62.9
COL.COLO4_26241 Corchorus olitorius HOM05D004555 ORTHO05D005305 4.3e-74 282.0 224 60.7
HanXRQChr16g0501461 Helianthus annuus HOM05D004555 ORTHO05D005305 4.3e-74 282.0 227 63.9
MD08G1024400 Malus domestica HOM05D004555 ORTHO05D005305 4.3e-74 282.0 224 61.2
FAN15G3036 Fragaria x ananassa HOM05D004555 ORTHO05D005305 7.3e-74 281.2 224 61.6
FAN26G3263 Fragaria x ananassa HOM05D004555 ORTHO05D005305 7.3e-74 281.2 224 61.6
Gohir.D05G194000 Gossypium hirsutum HOM05D004555 ORTHO05D005305 7.3e-74 281.2 223 61.9
Gorai.009G199000 Gossypium raimondii HOM05D004555 ORTHO05D005305 7.3e-74 281.2 223 61.9
Lj4P789T31 Lonicera japonica HOM05D004555 ORTHO05D005305 7.3e-74 281.2 216 61.6
Nn1g05806 Nelumbo nucifera HOM05D004555 ORTHO05D005305 7.3e-74 281.2 222 60.8
Atru.chr13.408 Acer truncatum HOM05D004555 ORTHO05D005305 9.5e-74 280.8 220 63.2
arahy.Tifrunner.gnm1.ann1.LAIT0P Arachis hypogaea HOM05D004555 ORTHO05D005305 9.5e-74 280.8 224 61.2
Thecc.08G033700 Theobroma cacao HOM05D004555 ORTHO05D005305 1.6e-73 280.0 216 63.4
Migut.C00768 Erythranthe guttata HOM05D004555 ORTHO05D005305 2.1e-73 279.6 222 60.4
Gohir.A05G190600 Gossypium hirsutum HOM05D004555 ORTHO05D005305 2.1e-73 279.6 223 61.9
Thecc.08G033500 Theobroma cacao HOM05D004555 ORTHO05D005305 2.1e-73 279.6 215 62.8
RcHm_v2.0_Chr6g0301691 Rosa chinensis HOM05D004555 ORTHO05D005305 2.8e-73 279.3 220 60.9
FvH4_2g39310 Fragaria vesca HOM05D004555 ORTHO05D005305 3.6e-73 278.9 224 61.2
EL10Ac1g00613 Beta vulgaris HOM05D004555 ORTHO05D005305 4.7e-73 278.5 224 61.2
Sed0025869 Sechium edule HOM05D004555 ORTHO05D005305 6.2e-73 278.1 216 62.5
DCAR_022455 Daucus carota HOM05D004555 ORTHO05D005305 8.1e-73 277.7 223 61.4
Sabra02G0025300 Salix brachista HOM05D004555 ORTHO05D005305 8.1e-73 277.7 224 61.2
Eucgr.F01860 Eucalyptus grandis HOM05D004555 ORTHO05D005305 1.4e-72 276.9 225 60.0
Solyc04g080750.4 Solanum lycopersicum HOM05D004555 ORTHO05D005305 1.4e-72 276.9 217 60.8
Glyma.17G253500 Glycine max HOM05D004555 ORTHO05D005305 3.1e-72 275.8 224 62.1
Peaxi162Scf00189g00812 Petunia axillaris HOM05D004555 ORTHO05D005305 6.8e-72 274.6 217 59.9
Phvul.001G011500 Phaseolus vulgaris HOM05D004555 ORTHO05D005305 8.9e-72 274.2 217 62.2
Lj5g0004312 Lotus japonicus HOM05D004555 ORTHO05D005305 1.2e-71 273.9 222 60.4
Glyma.14G071100 Glycine max HOM05D004555 ORTHO05D005305 1.5e-71 273.5 222 62.2
Cfa013877 Carpinus fangiana HOM05D004555 ORTHO05D005305 2.6e-71 272.7 218 61.5
Hund17186 Selenicereus undatus HOM05D004555 ORTHO05D005305 3.4e-71 272.3 221 59.7
PGSC0003DMG400003702 Solanum tuberosum HOM05D004555 ORTHO05D005305 3.4e-71 272.3 217 59.9
Atru.chr13.407 Acer truncatum HOM05D004555 ORTHO05D005305 7.5e-71 271.2 223 59.6
Potri.005G231600 Populus trichocarpa HOM05D004555 ORTHO05D005305 9.9e-71 270.8 223 60.1
Ciclev10002388m.g Citrus clementina HOM05D004555 ORTHO05D005305 1.3e-70 270.4 215 59.5
CANSAT25G2211 Cannabis sativa HOM05D004555 ORTHO05D005305 1.7e-70 270.0 223 57.0
PSO724G1102 Papaver somniferum HOM05D004555 ORTHO05D005305 3.7e-70 268.9 228 58.8
TPR.G30491 Trifolium pratense HOM05D004555 ORTHO05D005305 4.9e-70 268.5 228 57.0
GSVIVG01009773001 Vitis vinifera HOM05D004555 ORTHO05D005305 4.9e-70 268.5 223 60.1
MBI16_g23832_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 8.3e-70 267.7 224 60.3
TWI56G1140 Tripterygium wilfordii HOM05D004555 ORTHO05D005305 5.4e-69 265.0 247 55.9
VMungo0647G2091 Vigna mungo HOM05D004555 ORTHO05D005305 1.2e-68 263.8 215 61.4
Hund17243 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.6e-68 261.9 221 56.6
Duzib116G0274 Durio zibethinus HOM05D004555 ORTHO05D005305 6.0e-68 261.5 195 67.2
AUR62014481 Chenopodium quinoa HOM05D004555 ORTHO05D005305 1.0e-67 260.8 217 56.2
COL.COLO4_26242 Corchorus olitorius HOM05D004555 ORTHO05D005305 5.1e-67 258.5 187 65.8
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 5.1e-67 258.5 221 59.3
Aa31LG6G8640 Aethionema arabicum HOM05D004555 ORTHO05D005305 6.6e-67 258.1 180 77.2
Nitab4.5_0007928g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 6.6e-67 258.1 247 54.7
vmacro04301 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.1e-66 257.3 216 63.0
vmacro22853 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 1.1e-66 257.3 216 63.0
Cpa.g.sc99.8 Carica papaya HOM05D004555 ORTHO05D005305 1.9e-66 256.5 217 62.2
Cc10_g14070 Coffea canephora HOM05D004555 ORTHO05D005305 5.6e-66 255.0 227 55.1
ECA232G1060 Erigeron canadensis HOM05D004555 ORTHO05D005305 5.6e-66 255.0 200 63.5
PSO729G0189 Papaver somniferum HOM05D004555 ORTHO05D005305 5.6e-66 255.0 254 52.8
Os01g0262500 Oryza sativa ssp. japonica HOM05D004555 ORTHO05D005305 1.3e-62 243.8 221 56.6
Haze_22549 Corylus avellana HOM05D004555 ORTHO05D005305 1.7e-62 243.4 192 60.9
SalBow7G0356 Salvia bowleyana HOM05D004555 ORTHO05D005305 1.7e-62 243.4 281 49.5
Psat6g009720 Pisum sativum HOM05D004555 ORTHO05D005305 2.2e-62 243.0 193 58.5
unitig_26.g9839 Utricularia gibba HOM05D004555 ORTHO05D005305 2.2e-62 243.0 213 55.4
Oeu030598.1 Olea europaea HOM05D004555 ORTHO05D005305 8.4e-62 241.1 226 55.8
Manes.18G021200 Manihot esculenta HOM05D004555 ORTHO05D005305 8.7e-59 231.1 221 51.6
AUR62034520 Chenopodium quinoa HOM05D004555 ORTHO05D005305 5.6e-58 228.4 188 56.9
SEGI_11700 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 2.8e-57 226.1 203 52.2
Hma1.2p1_1194F.1_g265760 Hydrangea macrophylla HOM05D004555 ORTHO05D005305 4.0e-56 222.2 184 60.3
Nitab4.5_0000577g0020 Nicotiana tabacum HOM05D004555 ORTHO05D005305 9.0e-56 221.1 217 51.6
Cc10_g02450 Coffea canephora HOM05D004555 ORTHO05D005305 3.8e-54 215.7 151 66.2
Sopen04g034340 Solanum pennellii HOM05D004555 ORTHO05D005305 1.3e-51 207.2 148 66.2
ATR1154G019 Amborella trichopoda HOM05D004555 ORTHO05D005305 3.9e-51 205.7 190 53.2
Nitab4.5_0001091g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 2.8e-49 199.5 217 47.5
MELO3C010969.2 Cucumis melo HOM05D004555 ORTHO05D005305 4.8e-49 198.7 157 60.5
TPR.G17924 Trifolium pratense HOM05D004555 ORTHO05D005305 6.2e-49 198.4 161 60.2
Zm00001eb333330 Zea mays HOM05D004555 ORTHO05D005305 4.0e-48 195.7 207 50.2
MBI16_g23833_MAGBIO Magnolia biondii HOM05D004555 ORTHO05D005305 2.2e-46 189.9 236 46.6
Sed0024456 Sechium edule HOM05D004555 ORTHO05D005305 2.1e-44 183.3 173 54.3
AagrBONN_evm.TU.Sc2ySwM_369.584 Anthoceros agrestis HOM05D004555 ORTHO05D005305 3.9e-43 179.1 210 43.3
SEGI_31948 Sequoiadendron giganteum HOM05D004555 ORTHO05D005305 6.7e-43 178.3 151 52.3
Nitab4.5_0001861g0030 Nicotiana tabacum HOM05D004555 ORTHO05D005305 4.3e-42 175.6 221 43.4
Mapoly0020s0017 Marchantia polymorpha HOM05D004555 ORTHO05D005305 6.2e-41 171.8 211 41.7
SMO259G0011 Selaginella moellendorffii HOM05D004555 ORTHO05D005305 2.4e-40 169.9 211 42.2
HanXRQChr09g0269541 Helianthus annuus HOM05D004555 ORTHO05D005305 1.1e-34 151.0 123 61.8
FAN20G2579 Fragaria x ananassa HOM05D004555 ORTHO05D005305 8.2e-33 144.8 224 40.6
Haze_22557 Corylus avellana HOM05D004555 ORTHO05D005305 1.3e-30 137.5 112 59.8
Nitab4.5_0007928g0040 Nicotiana tabacum HOM05D004555 ORTHO05D005305 1.1e-29 134.4 127 52.8
CBR_g32335 Chara braunii HOM05D004555 ORTHO05D005305 7.1e-29 131.7 183 37.7
Lalb_Chr14g0369531 Lupinus albus HOM05D004555 ORTHO05D005305 7.9e-28 128.3 86 67.4
Lalb_Chr14g0369521 Lupinus albus HOM05D004555 ORTHO05D005305 1.3e-27 127.5 121 51.2
TPR.G29885 Trifolium pratense HOM05D004555 ORTHO05D005305 3.9e-27 125.9 121 52.1
CARHR263530 Cardamine hirsuta HOM05D004555 ORTHO05D005305 1.3e-25 120.9 69 88.4
MCO11G540 Micromonas commoda HOM05D004555 ORTHO05D005305 5.3e-24 115.5 204 35.8
Pp3c7_6700 Physcomitrium patens HOM05D004555 ORTHO05D005305 7.6e-23 111.7 156 37.2
vmacro04300 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.3e-18 95.9 149 38.9
vmacro22852 Vaccinium macrocarpon HOM05D004555 ORTHO05D005305 4.3e-18 95.9 149 38.9
QL02p009653 Quercus lobata HOM05D004555 ORTHO05D005305 4.8e-17 92.4 63 69.8
Cc11_g05350 Coffea canephora HOM05D004555 ORTHO05D005305 5.0e-14 82.4 74 58.1
PGR031G0233 Punica granatum HOM05D004555 ORTHO05D005305 3.3e-10 69.7 70 45.7
Hund17190 Selenicereus undatus HOM05D004555 ORTHO05D005305 4.8e-09 65.9 76 43.4


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