Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32445H Brassica oleracea HOM05D000975 ORTHO05D003128 1.7e-97 359.8 244 100.0
C09p28670 Brassica napus HOM05D000975 ORTHO05D012203 3.0e-86 322.4 240 89.6
C07p11520 Brassica napus HOM05D000975 ORTHO05D012203 5.1e-86 321.6 240 93.8
C04p20990 Brassica napus HOM05D000975 ORTHO05D000395 8.7e-86 320.9 240 94.6
BcaC02g09151 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-85 320.5 244 93.9
BcaC04g20351 Brassica carinata HOM05D000975 ORTHO05D003128 5.3e-75 285.0 240 88.8
C07p07360 Brassica napus HOM05D000975 ORTHO05D003128 7.9e-71 271.2 240 69.2
A01p14490 Brassica napus HOM05D000975 ORTHO05D012203 1.1e-69 267.3 179 79.9
A10p04880 Brassica napus HOM05D000975 ORTHO05D012203 3.2e-64 249.2 178 84.3
A07p05600 Brassica napus HOM05D000975 ORTHO05D003128 8.0e-63 244.6 240 70.0
BolC6t38531H Brassica oleracea HOM05D000975 ORTHO05D012203 2.3e-62 243.0 240 61.7
A06p27610 Brassica napus HOM05D000975 ORTHO05D012203 3.9e-62 242.3 240 69.6
A06p33000 Brassica napus HOM05D000975 ORTHO05D003128 3.9e-62 242.3 240 70.4
BraA03t15344Z Brassica rapa HOM05D000975 ORTHO05D012203 3.9e-62 242.3 241 61.8
A09p29840 Brassica napus HOM05D000975 ORTHO05D000395 5.2e-62 241.9 240 70.0
A01p28030 Brassica napus HOM05D000975 ORTHO05D000395 1.5e-61 240.4 240 69.6
A06p21920 Brassica napus HOM05D000975 ORTHO05D012203 1.5e-61 240.4 240 69.6
A01p29580 Brassica napus HOM05D000975 ORTHO05D000421 2.0e-61 240.0 239 66.9
BolC4t25468H Brassica oleracea HOM05D000975 ORTHO05D012203 5.7e-61 238.4 240 60.4
A02p27520 Brassica napus HOM05D000975 ORTHO05D000395 7.4e-61 238.0 240 69.2
BraA02t07584Z Brassica rapa HOM05D000975 ORTHO05D012203 2.8e-60 236.1 241 60.6
BraA01t03431Z Brassica rapa HOM05D000975 ORTHO05D012203 3.7e-60 235.7 179 74.3
BraA02t07781Z Brassica rapa HOM05D000975 ORTHO05D012203 4.8e-60 235.3 179 74.3
A09p29880 Brassica napus HOM05D000975 ORTHO05D003128 5.7e-53 211.8 116 91.4
A06p20330 Brassica napus HOM05D000975 ORTHO05D003128 1.3e-52 210.7 118 90.7
BraA06t26231Z Brassica rapa HOM05D000975 ORTHO05D012203 2.2e-52 209.9 241 55.6
A07p02240 Brassica napus HOM05D000975 ORTHO05D003128 1.8e-51 206.8 118 89.0
BraA03t14844Z Brassica rapa HOM05D000975 ORTHO05D012203 1.2e-50 204.1 117 88.9
BraA03t15444Z Brassica rapa HOM05D000975 ORTHO05D003128 5.9e-50 201.8 117 88.9
BcaC06g34162 Brassica carinata HOM05D000975 ORTHO05D003128 2.9e-49 199.5 97 100.0
BcaNung04170 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-46 190.7 199 57.8
BraA01t03437Z Brassica rapa HOM05D000975 ORTHO05D012203 1.1e-40 171.0 147 70.1
BcaC03g14229 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-39 167.5 156 67.3
BcaC04g22997 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-38 164.5 239 49.4
A09p24150 Brassica napus HOM05D000975 ORTHO05D003128 3.8e-33 146.0 125 69.6
BolC3t21086H Brassica oleracea HOM05D000975 ORTHO05D033007 6.6e-33 145.2 143 93.7
A03p63360 Brassica napus HOM05D000975 ORTHO05D003128 2.5e-32 143.3 82 87.8
BolC3t20047H Brassica oleracea HOM05D000975 ORTHO05D012203 2.1e-31 140.2 188 51.6
BcaB02g10294 Brassica carinata HOM05D000975 ORTHO05D003128 2.3e-30 136.7 204 44.6
BcaB03g16444 Brassica carinata HOM05D000975 ORTHO05D003128 4.0e-30 136.0 171 53.2
BcaB04g17865 Brassica carinata HOM05D000975 ORTHO05D003128 6.8e-30 135.2 75 90.7
BcaC06g36141 Brassica carinata HOM05D000975 ORTHO05D003128 9.8e-29 131.3 99 71.7
BcaC08g44255 Brassica carinata HOM05D000975 ORTHO05D012203 9.8e-29 131.3 119 67.2
A07p22640 Brassica napus HOM05D000975 ORTHO05D012203 2.9e-28 129.8 126 65.9
BcaB01g01115 Brassica carinata HOM05D000975 ORTHO05D003128 3.2e-27 126.3 215 52.6
BcaC05g25477 Brassica carinata HOM05D000975 ORTHO05D003128 1.6e-26 124.0 117 54.7
BcaB03g16068 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-24 117.9 168 42.3
A05p09960 Brassica napus HOM05D000975 ORTHO05D039383 5.6e-24 115.5 71 81.7
C02p45190 Brassica napus HOM05D000975 ORTHO05D099179 1.1e-22 111.3 96 97.9
BcaB02g11446 Brassica carinata HOM05D000975 ORTHO05D003128 1.4e-22 110.9 157 45.9
BcaB04g18228 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-22 109.8 98 61.2
BcaB08g35625 Brassica carinata HOM05D000975 ORTHO05D003128 3.1e-22 109.8 161 55.3
BcaC09g48471 Brassica carinata HOM05D000975 ORTHO05D039383 6.8e-22 108.6 53 96.2
BcaB04g18231 Brassica carinata HOM05D000975 ORTHO05D000421 1.3e-20 104.4 238 38.2
BcaB07g33020 Brassica carinata HOM05D000975 ORTHO05D000421 2.2e-20 103.6 98 57.1
C07p32050 Brassica napus HOM05D000975 ORTHO05D000395 2.2e-20 103.6 100 89.0
BcaC06g35755 Brassica carinata HOM05D000975 ORTHO05D003128 4.9e-20 102.4 120 50.0
BolC2t08855H Brassica oleracea HOM05D000975 ORTHO05D000395 4.9e-20 102.4 119 50.4
BolC7t41598H Brassica oleracea HOM05D000975 ORTHO05D000395 4.9e-20 102.4 120 50.0
BolC2t08412H Brassica oleracea HOM05D000975 ORTHO05D000395 8.3e-20 101.7 99 52.5
BcaC03g15228 Brassica carinata HOM05D000975 ORTHO05D003128 1.9e-19 100.5 186 45.7
BolC3t20043H Brassica oleracea HOM05D000975 ORTHO05D003128 4.1e-19 99.4 98 53.1
C07p21340 Brassica napus HOM05D000975 ORTHO05D003128 5.4e-19 99.0 102 46.1
C07p25800 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-18 97.8 98 53.1
BcaB01g01398 Brassica carinata HOM05D000975 ORTHO05D003128 1.6e-18 97.4 99 49.5
C01p26870 Brassica napus HOM05D000975 ORTHO05D000421 1.6e-18 97.4 102 46.1
BcaC06g34842 Brassica carinata HOM05D000975 ORTHO05D003128 2.1e-18 97.1 98 53.1
BcaC02g09820 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-18 96.7 98 52.0
BcaC04g22080 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-18 96.7 173 34.1
C02p28110 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-18 96.7 182 46.2
C09p23710 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-18 96.7 173 34.1
BolC9t56171H Brassica oleracea HOM05D000975 ORTHO05D000395 2.7e-18 96.7 102 45.1
C09p33350 Brassica napus HOM05D000975 ORTHO05D000421 3.5e-18 96.3 173 34.7
BolC6t35806H Brassica oleracea HOM05D000975 ORTHO05D003128 4.6e-18 95.9 102 44.1
BcaC02g10880 Brassica carinata HOM05D000975 ORTHO05D000421 6.0e-18 95.5 102 44.1
C02p34180 Brassica napus HOM05D000975 ORTHO05D003128 6.0e-18 95.5 187 48.1
BcaC02g11383 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-17 94.7 99 44.4
BcaC02g08706 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-17 94.4 99 44.4
BcaC02g10515 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-17 94.4 102 43.1
BcaC09g50298 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-17 94.4 189 45.0
BolC4t24346H Brassica oleracea HOM05D000975 ORTHO05D000421 1.3e-17 94.4 102 43.1
BolC2t09401H Brassica oleracea HOM05D000975 ORTHO05D000395 1.7e-17 94.0 102 43.1
C09p39100 Brassica napus HOM05D000975 ORTHO05D018701 3.0e-17 93.2 102 43.1
BolC9t56790H Brassica oleracea HOM05D000975 ORTHO05D018701 3.0e-17 93.2 102 43.1
BcaB05g21808 Brassica carinata HOM05D000975 ORTHO05D003128 3.9e-17 92.8 98 54.1
C04p36240 Brassica napus HOM05D000975 ORTHO05D003128 3.9e-17 92.8 186 42.5
C04p40840 Brassica napus HOM05D000975 ORTHO05D003128 3.9e-17 92.8 102 43.1
BcaC05g27533 Brassica carinata HOM05D000975 ORTHO05D003128 5.1e-17 92.4 174 34.5
C04p51480 Brassica napus HOM05D000975 ORTHO05D000421 1.1e-16 91.3 170 35.3
C04p15960 Brassica napus HOM05D000975 ORTHO05D018701 1.5e-16 90.9 181 33.7
BcaB08g35323 Brassica carinata HOM05D000975 ORTHO05D003128 7.3e-16 88.6 65 66.2
BcaB05g21809 Brassica carinata HOM05D000975 ORTHO05D003128 1.2e-15 87.8 110 41.8
BolC1t04213H Brassica oleracea HOM05D000975 ORTHO05D003128 1.6e-15 87.4 174 31.6
C03p87710 Brassica napus HOM05D000975 ORTHO05D033007 3.6e-15 86.3 82 93.9
BcaB08g35181 Brassica carinata HOM05D000975 ORTHO05D003128 6.2e-15 85.5 94 44.7
BcaB04g17404 Brassica carinata HOM05D000975 ORTHO05D000421 8.1e-15 85.1 102 41.2
BcaC02g11384 Brassica carinata HOM05D000975 ORTHO05D000395 1.4e-14 84.3 93 50.5
A05p23650 Brassica napus HOM05D000975 ORTHO05D017505 4.0e-14 82.8 93 46.2
BraA05t21233Z Brassica rapa HOM05D000975 ORTHO05D017505 4.0e-14 82.8 93 46.2
BolC5t32460H Brassica oleracea HOM05D000975 ORTHO05D003128 8.9e-14 81.6 93 43.0
BcaC03g14807 Brassica carinata HOM05D000975 ORTHO05D000395 2.0e-13 80.5 167 34.1
C03p75410 Brassica napus HOM05D000975 ORTHO05D012203 5.8e-13 79.0 79 94.9
C02p44170 Brassica napus HOM05D000975 ORTHO05D032563 7.5e-13 78.6 107 38.3
BcaB08g35321 Brassica carinata HOM05D000975 ORTHO05D003128 1.3e-12 77.8 110 37.3
BcaC04g20350 Brassica carinata HOM05D000975 ORTHO05D003128 2.9e-12 76.6 101 40.6
BolC8t48484H Brassica oleracea HOM05D000975 ORTHO05D032563 3.7e-12 76.3 107 37.4
BcaC02g09150 Brassica carinata HOM05D000975 ORTHO05D003128 6.4e-12 75.5 101 39.6
C02p09970 Brassica napus HOM05D000975 ORTHO05D003128 6.4e-12 75.5 101 39.6
C03p87740 Brassica napus HOM05D000975 ORTHO05D003128 6.4e-12 75.5 101 39.6
C04p20970 Brassica napus HOM05D000975 ORTHO05D000395 6.4e-12 75.5 101 39.6
C07p32020 Brassica napus HOM05D000975 ORTHO05D003128 6.4e-12 75.5 101 39.6
C08p14240 Brassica napus HOM05D000975 ORTHO05D003128 6.4e-12 75.5 101 39.6
A01p33220 Brassica napus HOM05D000975 ORTHO05D000395 8.3e-12 75.1 81 60.5
A09p31720 Brassica napus HOM05D000975 ORTHO05D000395 1.1e-11 74.7 101 39.6
C02p32260 Brassica napus HOM05D000975 ORTHO05D000395 2.4e-11 73.6 102 38.2
C07p07340 Brassica napus HOM05D000975 ORTHO05D000395 2.4e-11 73.6 101 39.6
C09p26460 Brassica napus HOM05D000975 ORTHO05D000395 2.4e-11 73.6 102 38.2
BcaC03g14966 Brassica carinata HOM05D000975 ORTHO05D003128 3.2e-11 73.2 85 40.0
BcaC04g20797 Brassica carinata HOM05D000975 ORTHO05D003128 4.1e-11 72.8 82 45.1
BcaC07g38076 Brassica carinata HOM05D000975 ORTHO05D017505 4.1e-11 72.8 101 38.6
C09p43970 Brassica napus HOM05D000975 ORTHO05D003128 5.4e-11 72.4 198 34.8
BraA09t38303Z Brassica rapa HOM05D000975 ORTHO05D003128 5.4e-11 72.4 101 39.6
A09p24380 Brassica napus HOM05D000975 ORTHO05D000395 7.1e-11 72.0 80 58.8
Hma1.2p1_0052F.1_g030670 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 9.2e-11 71.6 106 35.8
A01p29590 Brassica napus HOM05D000975 ORTHO05D000395 1.2e-10 71.2 101 37.6
A06p21900 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-10 71.2 101 37.6
A07p02250 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-10 71.2 101 37.6
A08p09910 Brassica napus HOM05D000975 ORTHO05D003128 1.2e-10 71.2 101 37.6
BraA02t07023Z Brassica rapa HOM05D000975 ORTHO05D003128 1.2e-10 71.2 101 37.6
BraA09t37348Z Brassica rapa HOM05D000975 ORTHO05D003128 1.2e-10 71.2 101 37.6
A06p44620 Brassica napus HOM05D000975 ORTHO05D033007 2.1e-10 70.5 79 58.2
BcaC04g21307 Brassica carinata HOM05D000975 ORTHO05D003128 2.7e-10 70.1 64 46.9
A06p27630 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-10 70.1 101 36.6
C02p32280 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-10 70.1 75 93.3
C04p57190 Brassica napus HOM05D000975 ORTHO05D003128 2.7e-10 70.1 102 38.2
BcaB03g16188 Brassica carinata HOM05D000975 ORTHO05D003128 4.6e-10 69.3 98 35.7
BcaB07g33059 Brassica carinata HOM05D000975 ORTHO05D003128 4.6e-10 69.3 171 35.7
A06p32980 Brassica napus HOM05D000975 ORTHO05D003128 4.6e-10 69.3 101 36.6
BcaB04g17402 Brassica carinata HOM05D000975 ORTHO05D017505 6.0e-10 68.9 76 42.1
C09p13190 Brassica napus HOM05D000975 ORTHO05D003128 6.0e-10 68.9 102 38.2
Atru.chr2.240 Acer truncatum HOM05D000621 ORTHO05D000421 7.8e-10 68.6 97 35.1
BcaC07g37493 Brassica carinata HOM05D000975 ORTHO05D003128 1.0e-09 68.2 68 41.2
BolC1t02631H Brassica oleracea HOM05D000975 ORTHO05D017505 1.3e-09 67.8 65 47.7
C02p51080 Brassica napus HOM05D000975 ORTHO05D003128 2.3e-09 67.0 75 90.7
BcaB01g00464 Brassica carinata HOM05D000975 ORTHO05D003128 3.0e-09 66.6 65 44.6
BcaB02g11058 Brassica carinata HOM05D000975 ORTHO05D003128 3.0e-09 66.6 93 36.6
BolC5t32044H Brassica oleracea HOM05D000975 ORTHO05D003128 3.0e-09 66.6 90 43.3
BolC8t47809H Brassica oleracea HOM05D000975 ORTHO05D003128 3.0e-09 66.6 63 46.0
BraA02t07581Z Brassica rapa HOM05D000975 ORTHO05D003128 3.0e-09 66.6 101 36.6
BcaC06g34163 Brassica carinata HOM05D000975 ORTHO05D003128 3.9e-09 66.2 100 40.0
SalBow3G2697 Salvia bowleyana HOM05D000621 ORTHO05D000421 3.9e-09 66.2 100 36.0
BolC6t37337H Brassica oleracea HOM05D000975 ORTHO05D003128 5.1e-09 65.9 63 46.0
Gohir.A13G176300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 5.1e-09 65.9 96 34.4
Gohir.D13G182700 Gossypium hirsutum HOM05D000621 ORTHO05D000421 5.1e-09 65.9 96 34.4
Gorai.013G208100 Gossypium raimondii HOM05D000621 ORTHO05D000421 5.1e-09 65.9 96 34.4
C05p33160 Brassica napus HOM05D000975 ORTHO05D000395 6.6e-09 65.5 90 42.2
C04p28020 Brassica napus HOM05D000975 ORTHO05D003128 1.1e-08 64.7 63 44.4
BolC7t42809H Brassica oleracea HOM05D000975 ORTHO05D017505 1.1e-08 64.7 65 44.6
BolC8t50332H Brassica oleracea HOM05D000975 ORTHO05D003128 1.1e-08 64.7 63 44.4
Lj5C325G6 Lonicera japonica HOM05D000621 ORTHO05D000421 2.5e-08 63.5 106 31.1
Atru.chr2.2169 Acer truncatum HOM05D000621 ORTHO05D000421 4.3e-08 62.8 94 34.0
Atru.chr2.2173 Acer truncatum HOM05D000621 ORTHO05D000421 4.3e-08 62.8 94 34.0
vmacro01582 Vaccinium macrocarpon HOM05D000621 ORTHO05D000421 4.3e-08 62.8 102 33.3
BcaB07g33060 Brassica carinata HOM05D000975 ORTHO05D017505 5.6e-08 62.4 90 36.7
MSTRG.27927 Avicennia marina HOM05D000621 ORTHO05D000421 1.2e-07 61.2 99 33.3
GSVIVG01031264001 Vitis vinifera HOM05D000621 ORTHO05D000421 1.2e-07 61.2 97 33.0
HanXRQChr05g0135641 Helianthus annuus HOM05D000621 ORTHO05D000421 1.6e-07 60.8 103 35.9
Ciclev10001744m.g Citrus clementina HOM05D000621 ORTHO05D000421 2.1e-07 60.5 97 30.9
TPR.G2597 Trifolium pratense HOM05D000621 ORTHO05D000421 2.1e-07 60.5 98 36.7
BolC9t55546H Brassica oleracea HOM05D000975 ORTHO05D012203 3.6e-07 59.7 85 78.8
Cc02_g35280 Coffea canephora HOM05D000621 ORTHO05D000421 3.6e-07 59.7 98 35.7
BolC4t25160H Brassica oleracea HOM05D000975 ORTHO05D003128 4.7e-07 59.3 56 50.0
Sopen01g044280 Solanum pennellii HOM05D000621 ORTHO05D000421 4.7e-07 59.3 111 32.4
BcaB03g16067 Brassica carinata HOM05D000975 ORTHO05D003128 6.2e-07 58.9 113 29.2
DCAR_028263 Daucus carota HOM05D000621 ORTHO05D000421 6.2e-07 58.9 102 35.3
Solyc01g100780.3 Solanum lycopersicum HOM05D000621 ORTHO05D000421 8.1e-07 58.5 113 31.9
Ah.11g049090 Amaranthus hybridus HOM05D000621 ORTHO05D000421 1.1e-06 58.2 97 32.0
BcaC03g15684 Brassica carinata HOM05D000975 ORTHO05D003128 1.1e-06 58.2 100 36.0
Cpa.g.sc48.181 Carica papaya HOM05D000621 ORTHO05D000421 1.1e-06 58.2 96 32.3
PGSC0003DMG400002758 Solanum tuberosum HOM05D000621 ORTHO05D000421 1.1e-06 58.2 115 31.3
Actinidia35214 Actinidia chinensis HOM05D000621 ORTHO05D000421 1.4e-06 57.8 95 36.8
BraSC36t46029Z Brassica rapa HOM05D000975 ORTHO05D003128 1.4e-06 57.8 101 34.7
Ca_10185_v3 Cicer arietinum L. HOM05D000621 ORTHO05D000421 1.4e-06 57.8 95 36.8
Psat6g153280 Pisum sativum HOM05D000621 ORTHO05D000421 1.4e-06 57.8 99 36.4
Migut.N00947 Erythranthe guttata HOM05D000621 ORTHO05D000421 1.8e-06 57.4 101 33.7
RcHm_v2.0_Chr4g0426121 Rosa chinensis HOM05D000621 ORTHO05D000421 1.8e-06 57.4 97 34.0
DCAR_011628 Daucus carota HOM05D000621 ORTHO05D000421 2.4e-06 57.0 99 32.3
C07p11490 Brassica napus HOM05D000975 ORTHO05D000395 3.1e-06 56.6 83 39.8
AUR62000424 Chenopodium quinoa HOM05D000621 ORTHO05D000421 3.1e-06 56.6 102 34.3
Oeu053731.1 Olea europaea HOM05D000621 ORTHO05D000421 3.1e-06 56.6 100 33.0
BolC5t33487H Brassica oleracea HOM05D000975 ORTHO05D012203 4.0e-06 56.2 34 88.2
EL10Ac4g09498 Beta vulgaris HOM05D000621 ORTHO05D000421 5.2e-06 55.8 98 34.7
C05p35150 Brassica napus HOM05D000975 ORTHO05D017505 5.2e-06 55.8 57 45.6
unitig_26.g9551 Utricularia gibba HOM05D000621 ORTHO05D000421 5.2e-06 55.8 98 36.7


User provided reference genes

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