Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32291H Brassica oleracea HOM05D000050 ORTHO05D033467 1.0e-30 136.0 63 100.0
C05p35770 Brassica napus HOM05D000050 ORTHO05D033467 5.8e-26 120.2 62 87.1
BraA05t21023Z Brassica rapa HOM05D000050 ORTHO05D033467 7.9e-23 109.8 55 89.1
A05p21170 Brassica napus HOM05D000050 ORTHO05D012585 1.9e-16 88.6 50 76.0
C05p35730 Brassica napus HOM05D000050 ORTHO05D012585 1.9e-16 88.6 50 76.0
BraA05t21022Z Brassica rapa HOM05D000050 ORTHO05D012585 1.9e-16 88.6 50 76.0
A05p23520 Brassica napus HOM05D000050 ORTHO05D012585 2.5e-13 78.2 41 82.9
BcaC05g27593 Brassica carinata HOM05D000050 ORTHO05D012585 7.4e-13 76.6 41 80.5
BcaC05g27715 Brassica carinata HOM05D000050 ORTHO05D012585 7.4e-13 76.6 41 80.5
BcaC05g27716 Brassica carinata HOM05D000050 ORTHO05D012585 7.4e-13 76.6 41 80.5
BcaB03g13654 Brassica carinata HOM05D000050 ORTHO05D012585 8.2e-12 73.2 41 78.0
BraA05t21222Z Brassica rapa HOM05D000050 ORTHO05D012585 1.1e-11 72.8 47 68.1
A05p23540 Brassica napus HOM05D000050 ORTHO05D012585 1.8e-11 72.0 39 79.5
C05p36990 Brassica napus HOM05D000050 ORTHO05D012585 1.8e-11 72.0 39 79.5
Thhalv10001874m.g Eutrema salsugineum HOM05D000050 ORTHO05D012585 2.0e-10 68.6 40 72.5
C05p35740 Brassica napus HOM05D000050 ORTHO05D012585 3.4e-10 67.8 41 75.6
AL1G50600 Arabidopsis lyrata HOM05D000050 ORTHO05D012585 1.4e-08 62.4 37 70.3
AL1G50980 Arabidopsis lyrata HOM05D000050 ORTHO05D012585 1.4e-08 62.4 39 64.1
AL1G50580 Arabidopsis lyrata HOM05D000050 ORTHO05D012585 1.9e-08 62.0 37 70.3
BolC5t32288H Brassica oleracea HOM05D000050 ORTHO05D012585 2.5e-08 61.6 39 71.8
AT1G36340 Arabidopsis thaliana HOM05D000050 ORTHO05D012585 2.7e-07 58.2 39 53.8
Carub.0001s3336 Capsella rubella HOM05D000050 ORTHO05D000380 4.6e-07 57.4 43 55.8


User provided reference genes

Program Settings