Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32216H Brassica oleracea HOM05D000135 ORTHO05D011359 3.4e-32 141.7 114 100.0
C05p34910 Brassica napus HOM05D000135 ORTHO05D011359 2.2e-31 139.0 114 98.2
BcaC05g27517 Brassica carinata HOM05D000135 ORTHO05D011359 3.1e-25 118.6 63 96.8
BraA05t20974Z Brassica rapa HOM05D000135 ORTHO05D011359 1.7e-23 112.8 68 89.7
BcaB02g11072 Brassica carinata HOM05D000135 ORTHO05D011359 1.9e-22 109.4 67 88.1
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 4.3e-19 98.2 67 76.1
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 1.6e-18 96.3 67 76.1
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 3.8e-15 85.1 67 64.2
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 1.1e-14 83.6 67 61.2
BcaB07g33677 Brassica carinata HOM05D000135 ORTHO05D011359 2.4e-14 82.4 67 61.2
A05p20660 Brassica napus HOM05D000135 ORTHO05D011359 4.2e-14 81.6 67 70.1
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 1.2e-13 80.1 67 61.2
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 1.2e-13 80.1 67 61.2
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 1.6e-13 79.7 67 61.2
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 1.6e-13 79.7 67 61.2
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 6.0e-13 77.8 67 55.2
BolC6t35541H Brassica oleracea HOM05D000135 ORTHO05D011359 6.0e-13 77.8 67 59.7
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 7.9e-13 77.4 67 56.7
C06p04190 Brassica napus HOM05D000135 ORTHO05D011359 5.6e-11 71.2 52 71.2
AL6G28550 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 1.4e-09 66.6 62 54.8
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 1.4e-09 66.6 62 53.2
AT5G17470 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 2.4e-09 65.9 62 53.2
CARHR195730 Cardamine hirsuta HOM05D000135 ORTHO05D000203 5.3e-09 64.7 58 56.9
Sp3g02410 Schrenkiella parvula HOM05D000227 ORTHO05D011359 5.3e-09 64.7 64 48.4
BraA03t12154Z Brassica rapa HOM05D017453 ORTHO05D018582 2.6e-08 62.4 61 47.5
AL4G32280 Arabidopsis lyrata HOM05D000135 ORTHO05D011359 4.5e-08 61.6 62 51.6
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 1.7e-07 59.7 61 45.9
BcaC05g30534 Brassica carinata HOM05D000135 ORTHO05D011359 2.9e-07 58.9 67 43.3
BcaC09g47744 Brassica carinata HOM05D000135 ORTHO05D011359 3.8e-07 58.5 66 43.9
BNapus_Darmor_BZH_scaffold_162p00140 Brassica napus HOM05D000135 ORTHO05D011359 3.8e-07 58.5 66 43.9
BolC1t05833H Brassica oleracea HOM05D000135 ORTHO05D011359 3.8e-07 58.5 66 43.9
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 3.8e-07 58.5 61 45.9
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 4.9e-07 58.2 61 47.5
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 6.4e-07 57.8 61 45.9
AT2G36180 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 6.4e-07 57.8 58 51.7
Carub.0006s1570 Capsella rubella HOM05D000135 ORTHO05D011359 8.4e-07 57.4 62 46.8
BcaC05g30277 Brassica carinata HOM05D000135 ORTHO05D011359 1.1e-06 57.0 67 43.3
C05p63420 Brassica napus HOM05D000227 ORTHO05D011359 1.9e-06 56.2 67 41.8
Carub.0004s0480 Capsella rubella HOM05D000135 ORTHO05D000203 1.9e-06 56.2 62 46.8
AT3G03400 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 7.1e-06 54.3 66 39.4
BcaC05g30276 Brassica carinata HOM05D000135 ORTHO05D011359 7.1e-06 54.3 67 40.3


User provided reference genes

Program Settings