Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32193H Brassica oleracea HOM05D014220 ORTHO05D000411 1.6e-134 482.6 227 100.0
BcaC09g47909 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-120 433.7 336 67.0
C07p22790 Brassica napus HOM05D014220 ORTHO05D000411 6.6e-104 380.9 235 80.4
BolC9t55777H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-23 113.6 56 98.2
C03p51500 Brassica napus HOM05D014220 ORTHO05D024400 3.8e-19 99.4 117 49.6
BcaC09g50295 Brassica carinata HOM05D014220 ORTHO05D024400 1.9e-18 97.1 98 53.1
C01p26900 Brassica napus HOM05D014220 ORTHO05D024400 1.9e-18 97.1 98 53.1
BolC1t02635H Brassica oleracea HOM05D014220 ORTHO05D024400 1.9e-18 97.1 98 53.1
BcaC01g03089 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 75.0
BcaC03g16444 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 75.0
BcaC06g34564 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 75.0
BcaC08g46179 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 80.4
BolC3t17901H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 75.0
BolC6t39184H Brassica oleracea HOM05D000496 ORTHO05D000411 2.5e-18 96.7 56 80.4
BcaC03g15984 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-18 96.3 56 80.4
BcaC09g51274 Brassica carinata HOM05D014220 ORTHO05D092790 3.3e-18 96.3 98 53.1
BcaB07g31293 Brassica carinata HOM05D000496 ORTHO05D000411 4.3e-18 95.9 56 80.4
BcaC01g03438 Brassica carinata HOM05D000496 ORTHO05D000411 9.5e-18 94.7 56 73.2
BcaC04g21194 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-17 94.4 56 75.0
BcaC06g35070 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-17 94.4 56 73.2
BcaC03g15417 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-17 94.0 56 75.0
BcaC08g47088 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-17 94.0 56 78.6
BcaC02g09892 Brassica carinata HOM05D000496 ORTHO05D032642 3.6e-17 92.8 56 76.8
BcaC09g50802 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-17 92.4 56 76.8
BcaC04g22294 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-17 92.0 56 71.4
BcaC01g02163 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-17 91.7 56 71.4
BcaC03g15107 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-17 91.7 56 71.4
BcaC07g38782 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-17 91.7 56 71.4
BcaC09g48800 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-17 91.7 55 74.5
BcaC09g49480 Brassica carinata HOM05D000496 ORTHO05D000411 8.0e-17 91.7 56 75.0
C01p14910 Brassica napus HOM05D014220 ORTHO05D024400 1.0e-16 91.3 98 51.0
BcaC02g10520 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-16 90.9 56 69.6
BcaC08g44731 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-16 90.9 56 69.6
BcaB08g35328 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-16 90.1 56 73.2
BcaC01g02211 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-16 89.4 56 75.0
BcaC06g36700 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-16 89.4 56 71.4
BolSC21t60240H Brassica oleracea HOM05D000496 ORTHO05D000411 4.0e-16 89.4 56 75.0
BcaC01g02150 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-16 89.0 56 73.2
BcaC08g44039 Brassica carinata HOM05D000496 ORTHO05D014937 8.9e-16 88.2 56 69.6
BcaC04g19004 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-15 86.3 55 69.1
BcaC08g43480 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-15 86.3 56 69.6
BcaC08g45123 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-15 86.3 56 71.4
BcaC04g21671 Brassica carinata HOM05D000496 ORTHO05D000411 4.4e-15 85.9 56 69.6
BcaC03g14957 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-14 83.2 50 74.0
BcaC01g01165 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-14 82.0 56 67.9
BcaC04g19440 Brassica carinata HOM05D000496 ORTHO05D000411 1.4e-13 80.9 56 67.9
BcaB06g26647 Brassica carinata HOM05D000496 ORTHO05D000411 3.2e-13 79.7 56 67.9
BcaC02g10380 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-13 79.0 50 70.0
BcaC05g29488 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-12 77.8 44 77.3
BcaB01g02818 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-12 76.6 57 56.1
BcaC09g49110 Brassica carinata HOM05D000496 ORTHO05D000411 3.5e-12 76.3 56 60.7
BcaC07g39538 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-12 75.5 53 58.5
BcaC01g02265 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-12 75.1 56 62.5
BcaC02g08910 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-12 75.1 53 58.5
BcaC05g27815 Brassica carinata HOM05D000496 ORTHO05D000411 7.8e-12 75.1 53 58.5
C09p21780 Brassica napus HOM05D000496 ORTHO05D000411 7.8e-12 75.1 56 66.1
BcaB01g02812 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-11 74.7 57 54.4
BcaB06g26381 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-11 74.7 56 58.9
BcaC06g36711 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-11 74.7 56 60.7
BcaC05g27902 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 74.3 55 58.2
BcaC04g20576 Brassica carinata HOM05D000496 ORTHO05D039987 1.7e-11 73.9 52 61.5
BolC9t55778H Brassica oleracea HOM05D014220 ORTHO05D106843 1.7e-11 73.9 41 85.4
BraA09t39002Z Brassica rapa HOM05D000496 ORTHO05D000411 1.7e-11 73.9 56 66.1
BcaB06g27378 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-11 73.6 46 69.6
BcaB06g28121 Brassica carinata HOM05D000496 ORTHO05D000411 3.0e-11 73.2 56 57.1
BcaB01g02232 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-11 72.8 56 55.4
BcaC02g10789 Brassica carinata HOM05D000496 ORTHO05D000411 3.9e-11 72.8 53 58.5
BcaB07g32484 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-11 72.0 55 58.2
BcaB03g14222 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-11 71.6 53 58.5
C04p35470 Brassica napus HOM05D000496 ORTHO05D032642 8.6e-11 71.6 43 76.7
C06p14200 Brassica napus HOM05D000496 ORTHO05D000411 8.6e-11 71.6 53 60.4
BolC4t25099H Brassica oleracea HOM05D000496 ORTHO05D032642 8.6e-11 71.6 43 76.7
BcaC06g36471 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-10 71.2 53 56.6
BcaB04g17470 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-10 70.9 53 56.6
BcaC03g14607 Brassica carinata HOM05D000496 ORTHO05D031790 1.5e-10 70.9 56 67.9
BcaC03g16883 Brassica carinata HOM05D014220 ORTHO05D092861 1.5e-10 70.9 86 48.8
BcaC06g35766 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-10 70.9 49 65.3
BcaC03g15569 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-10 70.5 53 56.6
BcaC05g30568 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-10 70.5 56 51.8
BolC1t05084H Brassica oleracea HOM05D000496 ORTHO05D000411 1.9e-10 70.5 53 60.4
BcaB08g35848 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-10 69.7 53 58.5
BcaC07g37237 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-10 69.7 52 57.7
C05p49720 Brassica napus HOM05D000496 ORTHO05D000411 3.3e-10 69.7 53 54.7
A05p19890 Brassica napus HOM05D000496 ORTHO05D000411 4.3e-10 69.3 52 57.7
BraA01t02446Z Brassica rapa HOM05D000496 ORTHO05D000411 4.3e-10 69.3 52 57.7
BcaB01g03110 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-10 68.9 49 61.2
BcaC07g38016 Brassica carinata HOM05D000496 ORTHO05D000411 5.6e-10 68.9 49 63.3
BolC8t48398H Brassica oleracea HOM05D000496 ORTHO05D000411 5.6e-10 68.9 49 63.3
BcaC01g01817 Brassica carinata HOM05D000496 ORTHO05D000411 7.3e-10 68.6 53 56.6
BcaB06g26352 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-09 67.4 53 54.7
Sp7g09260 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.6e-09 67.4 56 51.8
BcaC03g15800 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-09 67.0 39 79.5
Sp1g32850 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.4e-08 64.3 55 52.7
Sp6g04730 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.4e-08 64.3 56 53.6
BcaC02g10837 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-08 63.9 51 58.8
BcaC09g49300 Brassica carinata HOM05D000496 ORTHO05D023877 1.8e-08 63.9 52 51.9
C01p40400 Brassica napus HOM05D000496 ORTHO05D023877 1.8e-08 63.9 52 51.9
BcaC04g21576 Brassica carinata HOM05D014220 ORTHO05D096222 2.3e-08 63.5 89 43.8
Carub.0001s1088 Capsella rubella HOM05D000496 ORTHO05D000411 2.3e-08 63.5 57 47.4
Sp6g10400 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.3e-08 63.5 52 50.0
Carub.0003s2750 Capsella rubella HOM05D000496 ORTHO05D000411 3.1e-08 63.2 57 47.4
Sp1g32360 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.1e-08 63.2 56 55.4
Sp3g24940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.1e-08 63.2 56 53.6
Sp4g04600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.1e-08 63.2 52 48.1
Sp7g08940 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.1e-08 63.2 56 51.8
BcaC04g21836 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-08 62.8 59 49.2
BcaC09g49799 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-08 62.4 53 52.8
Thhalv10005260m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.2e-08 62.4 56 50.0
BolC2t10251H Brassica oleracea HOM05D000496 ORTHO05D000411 6.8e-08 62.0 47 63.8
Sp7g08130 Schrenkiella parvula HOM05D000496 ORTHO05D000411 6.8e-08 62.0 52 48.1
Thhalv10015686m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 8.9e-08 61.6 56 51.8
SpUn0001_0770 Schrenkiella parvula HOM05D000496 ORTHO05D000411 8.9e-08 61.6 56 51.8
Carub.0003s2772 Capsella rubella HOM05D000496 ORTHO05D000411 1.5e-07 60.8 57 45.6
Thhalv10002297m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-07 60.8 59 47.5
Thhalv10015762m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.5e-07 60.8 59 47.5
Sp6g04550 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.5e-07 60.8 56 48.2
BcaC08g43609 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-07 60.5 59 47.5
Thhalv10019737m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-07 60.5 52 55.8
Sp6g10600 Schrenkiella parvula HOM05D000496 ORTHO05D000411 2.0e-07 60.5 52 46.2
Thhalv10019512m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 3.4e-07 59.7 56 50.0
Thhalv10009841m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-07 59.3 59 47.5
Thhalv10012321m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-07 59.3 52 51.9
Thhalv10022993m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 4.4e-07 59.3 59 49.2
AL6G45480 Arabidopsis lyrata HOM05D000496 ORTHO05D000411 5.8e-07 58.9 56 50.0
Thhalv10015514m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.8e-07 58.9 52 50.0
BcaC09g48817 Brassica carinata HOM05D000496 ORTHO05D016100 9.8e-07 58.2 59 47.5
Thhalv10002827m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.8e-07 58.2 52 50.0
BcaC06g35904 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-06 57.8 118 31.4
Carub.0007s3143 Capsella rubella HOM05D000496 ORTHO05D000411 1.3e-06 57.8 57 40.4
Sp5g18380 Schrenkiella parvula HOM05D000496 ORTHO05D000411 1.3e-06 57.8 61 42.6
Thhalv10011992m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-06 57.4 56 46.4
Thhalv10026902m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.7e-06 57.4 48 54.2
Carub.0008s1087 Capsella rubella HOM05D000496 ORTHO05D000411 2.2e-06 57.0 56 42.9
CARHR180340 Cardamine hirsuta HOM05D000496 ORTHO05D000411 2.2e-06 57.0 55 45.5
BcaC01g02493 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-06 56.6 55 47.3
BcaB06g27750 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-06 56.2 53 50.9
Sp1g33990 Schrenkiella parvula HOM05D000496 ORTHO05D000411 3.7e-06 56.2 56 42.9
BcaB01g01758 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-06 55.8 53 43.4
Carub.0004s0523 Capsella rubella HOM05D000496 ORTHO05D000411 4.9e-06 55.8 52 44.2
BcaC09g51821 Brassica carinata HOM05D000496 ORTHO05D000411 6.4e-06 55.5 55 41.8
BolC3t19003H Brassica oleracea HOM05D000496 ORTHO05D000411 6.4e-06 55.5 61 50.8
BcaC02g10911 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-06 55.1 53 47.2


User provided reference genes

Program Settings