Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t32015H Brassica oleracea HOM05D004342 ORTHO05D041540 1.6e-128 462.6 212 100.0
C05p32840 Brassica napus HOM05D004342 ORTHO05D041540 8.0e-128 460.3 212 99.5
BolC6t36906H Brassica oleracea HOM05D004342 ORTHO05D011040 3.6e-96 355.1 267 67.4
C04p46690 Brassica napus HOM05D004342 ORTHO05D011040 1.4e-87 326.6 263 62.0
BolC2t09673H Brassica oleracea HOM05D004342 ORTHO05D042860 5.8e-86 321.2 223 71.7
C04p26830 Brassica napus HOM05D004342 ORTHO05D011040 1.9e-84 316.2 263 60.8
BcaC03g15908 Brassica carinata HOM05D004342 ORTHO05D011040 1.7e-82 309.7 263 59.7
BraA02t07939Z Brassica rapa HOM05D004342 ORTHO05D107931 2.3e-82 309.3 274 58.4
BolC4t26257H Brassica oleracea HOM05D004342 ORTHO05D011040 3.9e-82 308.5 274 58.8
A02p29080 Brassica napus HOM05D004342 ORTHO05D042860 8.7e-82 307.4 212 70.3
C09p56360 Brassica napus HOM05D004342 ORTHO05D011040 5.6e-81 304.7 263 60.1
BolC4t24121H Brassica oleracea HOM05D004342 ORTHO05D011040 6.2e-80 301.2 274 58.0
C07p02600 Brassica napus HOM05D004342 ORTHO05D040391 1.8e-79 299.7 263 60.1
BcaC04g19377 Brassica carinata HOM05D004342 ORTHO05D011040 4.0e-79 298.5 264 59.5
BolC7t40658H Brassica oleracea HOM05D004342 ORTHO05D040391 4.0e-79 298.5 263 59.7
BcaB08g35403 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-76 290.4 243 60.1
BcaB03g16647 Brassica carinata HOM05D004342 ORTHO05D011040 1.2e-75 287.0 268 55.6
BcaB05g23589 Brassica carinata HOM05D004342 ORTHO05D011040 2.1e-75 286.2 266 54.5
BolC7t40696H Brassica oleracea HOM05D004342 ORTHO05D042740 2.7e-75 285.8 263 56.7
BolC9t58505H Brassica oleracea HOM05D004342 ORTHO05D011040 2.3e-74 282.7 265 57.7
BcaB08g35473 Brassica carinata HOM05D004342 ORTHO05D011040 5.1e-74 281.6 265 55.1
C07p03020 Brassica napus HOM05D004342 ORTHO05D042740 6.7e-74 281.2 263 55.9
BcaC05g27753 Brassica carinata HOM05D004342 ORTHO05D032754 1.5e-73 280.0 248 58.9
BcaB01g01402 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-73 279.6 265 55.1
C03p70160 Brassica napus HOM05D004342 ORTHO05D011040 1.9e-73 279.6 236 59.3
BolC5t33355H Brassica oleracea HOM05D004342 ORTHO05D016748 5.6e-73 278.1 210 64.8
C06p17080 Brassica napus HOM05D004342 ORTHO05D016748 1.6e-72 276.6 211 65.4
BolC8t47840H Brassica oleracea HOM05D004342 ORTHO05D016748 6.2e-72 274.6 211 65.9
BcaB08g35285 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-71 273.5 265 52.8
BcaC03g16189 Brassica carinata HOM05D004342 ORTHO05D011040 2.4e-71 272.7 225 63.1
BcaB01g02102 Brassica carinata HOM05D004342 ORTHO05D011040 9.0e-71 270.8 265 52.8
C02p48390 Brassica napus HOM05D004342 ORTHO05D011040 9.0e-71 270.8 261 54.4
BolC2t10870H Brassica oleracea HOM05D004342 ORTHO05D011040 9.0e-71 270.8 261 54.4
BcaB05g23453 Brassica carinata HOM05D004342 ORTHO05D011040 2.0e-70 269.6 262 51.9
BcaB06g27914 Brassica carinata HOM05D004342 ORTHO05D011040 2.6e-70 269.2 263 51.7
BcaB02g06560 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-70 268.9 253 54.5
BcaB08g35544 Brassica carinata HOM05D004342 ORTHO05D011040 1.0e-69 267.3 254 53.5
C05p46270 Brassica napus HOM05D004342 ORTHO05D016748 3.8e-69 265.4 209 62.7
BraA04t16111Z Brassica rapa HOM05D004342 ORTHO05D011040 4.9e-69 265.0 265 53.6
BcaB05g23725 Brassica carinata HOM05D004342 ORTHO05D011040 3.9e-66 255.4 260 51.9
BolC3t21133H Brassica oleracea HOM05D004342 ORTHO05D016748 1.9e-65 253.1 198 64.1
BcaB07g32852 Brassica carinata HOM05D004342 ORTHO05D011040 2.5e-65 252.7 260 52.7
C02p36040 Brassica napus HOM05D004342 ORTHO05D033291 8.2e-64 247.7 221 57.5
BcaB06g27477 Brassica carinata HOM05D004342 ORTHO05D011040 4.1e-63 245.4 265 49.4
BcaB02g10664 Brassica carinata HOM05D004342 ORTHO05D011040 5.3e-63 245.0 263 48.7
BcaB07g33971 Brassica carinata HOM05D004342 ORTHO05D011040 7.6e-62 241.1 240 52.9
BolC2t09619H Brassica oleracea HOM05D004342 ORTHO05D033291 7.6e-62 241.1 227 56.8
C05p37450 Brassica napus HOM05D004342 ORTHO05D032754 5.0e-61 238.4 259 50.6
BcaB03g16622 Brassica carinata HOM05D004342 ORTHO05D011040 6.5e-61 238.0 265 47.9
BcaC08g47011 Brassica carinata HOM05D004342 ORTHO05D011040 1.9e-60 236.5 263 48.3
BcaB06g27355 Brassica carinata HOM05D004342 ORTHO05D011040 3.0e-58 229.2 211 54.0
BolC3t19271H Brassica oleracea HOM05D004342 ORTHO05D032754 3.9e-58 228.8 259 49.0
C02p36010 Brassica napus HOM05D004342 ORTHO05D033291 8.7e-58 227.6 209 56.5
A01p25070 Brassica napus HOM05D004342 ORTHO05D011040 7.4e-57 224.6 208 59.1
C04p30590 Brassica napus HOM05D004342 ORTHO05D097110 2.8e-56 222.6 206 57.3
BraA01t02418Z Brassica rapa HOM05D004342 ORTHO05D011040 6.3e-56 221.5 257 49.4
BcaB04g18145 Brassica carinata HOM05D004342 ORTHO05D011040 3.4e-54 215.7 259 45.2
C03p68080 Brassica napus HOM05D004342 ORTHO05D042288 1.0e-53 214.2 227 52.9
BolC3t19031H Brassica oleracea HOM05D004342 ORTHO05D042288 1.0e-53 214.2 227 52.9
C07p09210 Brassica napus HOM05D004342 ORTHO05D014936 2.2e-53 213.0 121 81.0
BolC7t41332H Brassica oleracea HOM05D004342 ORTHO05D014936 2.2e-53 213.0 121 81.0
C01p35180 Brassica napus HOM05D004342 ORTHO05D028050 5.0e-53 211.8 118 82.2
BolC1t03477H Brassica oleracea HOM05D004342 ORTHO05D028050 5.0e-53 211.8 118 82.2
C08p05970 Brassica napus HOM05D004342 ORTHO05D098872 3.2e-52 209.1 134 72.4
C08p23450 Brassica napus HOM05D004342 ORTHO05D042841 7.9e-51 204.5 229 49.8
C02p39690 Brassica napus HOM05D004342 ORTHO05D014936 2.3e-50 203.0 121 78.5
BraA09t39012Z Brassica rapa HOM05D004342 ORTHO05D041860 1.1e-49 200.7 201 54.7
C07p14140 Brassica napus HOM05D004342 ORTHO05D014936 1.5e-49 200.3 121 76.0
BolC7t41910H Brassica oleracea HOM05D004342 ORTHO05D014936 4.3e-49 198.7 121 76.0
A09p34820 Brassica napus HOM05D004342 ORTHO05D041860 3.7e-48 195.7 201 54.2
C03p64680 Brassica napus HOM05D004342 ORTHO05D040895 1.2e-46 190.7 212 48.6
A01p27340 Brassica napus HOM05D004342 ORTHO05D028050 2.6e-46 189.5 123 71.5
BraA01t02874Z Brassica rapa HOM05D004342 ORTHO05D028050 2.6e-46 189.5 123 71.5
A01p28260 Brassica napus HOM05D004342 ORTHO05D014936 3.8e-45 185.7 104 83.7
BolC8t47411H Brassica oleracea HOM05D004342 ORTHO05D106550 6.5e-45 184.9 201 49.8
BraSC35t45984Z Brassica rapa HOM05D004342 ORTHO05D014936 8.5e-45 184.5 129 70.5
A10p08140 Brassica napus HOM05D004342 ORTHO05D014936 3.2e-44 182.6 129 70.5
C02p40200 Brassica napus HOM05D004342 ORTHO05D014936 3.9e-42 175.6 121 71.9
C02p40210 Brassica napus HOM05D004342 ORTHO05D018674 5.7e-41 171.8 102 79.4
BcaB07g33403 Brassica carinata HOM05D004342 ORTHO05D093493 9.7e-41 171.0 126 69.0
BcaC08g44285 Brassica carinata HOM05D004342 ORTHO05D016748 1.3e-40 170.6 151 58.3
BcaB06g27861 Brassica carinata HOM05D004342 ORTHO05D011040 2.2e-40 169.9 188 48.9
BolC8t49973H Brassica oleracea HOM05D004342 ORTHO05D042841 2.2e-40 169.9 215 47.0
BolC3t18726H Brassica oleracea HOM05D004342 ORTHO05D040895 3.1e-39 166.0 199 45.2
BraA07t27945Z Brassica rapa HOM05D004342 ORTHO05D014936 1.6e-38 163.7 103 73.8
C06p19750 Brassica napus HOM05D003441 ORTHO05D004516 2.9e-37 159.5 197 46.7
BcaC01g01112 Brassica carinata HOM05D004342 ORTHO05D016748 3.8e-37 159.1 143 57.3
BcaB08g34712 Brassica carinata HOM05D004342 ORTHO05D011040 1.4e-34 150.6 214 40.2
BcaB02g07288 Brassica carinata HOM05D004342 ORTHO05D016748 3.3e-33 146.0 160 47.5
A06p23950 Brassica napus HOM05D004342 ORTHO05D013036 1.1e-31 141.0 172 43.0
A06p24190 Brassica napus HOM05D004342 ORTHO05D013036 1.1e-31 141.0 172 43.0
BcaC01g01958 Brassica carinata HOM05D004342 ORTHO05D090434 1.4e-31 140.6 113 60.2
BraA04t16568Z Brassica rapa HOM05D004342 ORTHO05D013036 1.4e-31 140.6 173 42.8
A10p05900 Brassica napus HOM05D004342 ORTHO05D013036 2.4e-31 139.8 169 43.8
BolC5t32487H Brassica oleracea HOM05D004342 ORTHO05D016748 2.4e-31 139.8 152 50.7
A05p21050 Brassica napus HOM05D004342 ORTHO05D013036 7.0e-31 138.3 172 41.9
A02p33870 Brassica napus HOM05D004342 ORTHO05D013036 1.6e-30 137.1 172 42.4
BolC2t10046H Brassica oleracea HOM05D004342 ORTHO05D018674 2.0e-30 136.7 73 86.3
A05p24900 Brassica napus HOM05D004342 ORTHO05D013036 4.5e-30 135.6 172 41.9
BcaB07g33226 Brassica carinata HOM05D004342 ORTHO05D014936 2.9e-29 132.9 103 66.0
BcaB02g11238 Brassica carinata HOM05D004342 ORTHO05D011040 1.1e-28 131.0 89 64.0
A06p14130 Brassica napus HOM05D004342 ORTHO05D013036 1.1e-28 131.0 172 40.7
BcaB05g23199 Brassica carinata HOM05D004342 ORTHO05D011040 1.5e-28 130.6 135 53.3
A03p66340 Brassica napus HOM05D004342 ORTHO05D018674 3.2e-28 129.4 71 83.1
BraA03t15692Z Brassica rapa HOM05D004342 ORTHO05D018674 3.2e-28 129.4 71 83.1
BcaB01g02523 Brassica carinata HOM05D004342 ORTHO05D016748 1.6e-27 127.1 146 47.9
BolC6t36414H Brassica oleracea HOM05D004342 ORTHO05D042454 2.7e-27 126.3 212 38.7
C02p26240 Brassica napus HOM05D004342 ORTHO05D040487 4.7e-27 125.6 208 39.9
BraSC35t45983Z Brassica rapa HOM05D004342 ORTHO05D018674 1.0e-26 124.4 87 67.8
BolC2t08690H Brassica oleracea HOM05D004342 ORTHO05D040487 1.4e-26 124.0 208 39.4
BcaB04g17938 Brassica carinata HOM05D004342 ORTHO05D011040 1.8e-26 123.6 89 62.9
A03p66330 Brassica napus HOM05D000062 ORTHO05D000043 2.3e-26 123.2 76 77.6
BraA10t42852Z Brassica rapa HOM05D004342 ORTHO05D013036 8.8e-26 121.3 89 61.8
BolC2t09984H Brassica oleracea HOM05D004342 ORTHO05D107287 2.6e-25 119.8 289 32.2
BraA01t02499Z Brassica rapa HOM05D004342 ORTHO05D013036 2.6e-25 119.8 89 60.7
BolC6t39191H Brassica oleracea HOM05D004342 ORTHO05D041978 3.4e-25 119.4 106 59.4
BraA06t25485Z Brassica rapa HOM05D004342 ORTHO05D013036 9.8e-25 117.9 89 59.6
C05p42390 Brassica napus HOM05D004342 ORTHO05D041824 1.3e-24 117.5 120 50.0
BolC5t32968H Brassica oleracea HOM05D004342 ORTHO05D041824 1.3e-24 117.5 120 50.0
A04p03900 Brassica napus HOM05D004342 ORTHO05D018601 2.2e-24 116.7 69 78.3
C03p88250 Brassica napus HOM05D004342 ORTHO05D018601 2.2e-24 116.7 66 81.8
BraA02t08405Z Brassica rapa HOM05D004342 ORTHO05D013036 6.3e-24 115.2 89 59.6
A03p64730 Brassica napus HOM05D004342 ORTHO05D013036 8.3e-24 114.8 89 60.7
BraA03t15693Z Brassica rapa HOM05D004342 ORTHO05D027051 4.1e-23 112.5 84 65.5
BraA06t24546Z Brassica rapa HOM05D004342 ORTHO05D013036 7.0e-23 111.7 89 57.3
BraA10t43034Z Brassica rapa HOM05D004342 ORTHO05D013036 9.1e-23 111.3 89 58.4
BcaC07g39329 Brassica carinata HOM05D004342 ORTHO05D018601 1.6e-22 110.5 74 73.0
BcaB06g27423 Brassica carinata HOM05D004342 ORTHO05D027051 3.5e-22 109.4 89 66.3
BcaC06g36550 Brassica carinata HOM05D004342 ORTHO05D018601 1.0e-21 107.8 79 65.8
BcaB04g18376 Brassica carinata HOM05D004342 ORTHO05D018601 1.3e-21 107.5 62 74.2
A06p19230 Brassica napus HOM05D004342 ORTHO05D018601 3.8e-21 105.9 80 65.0
C07p06590 Brassica napus HOM05D004342 ORTHO05D042200 1.1e-20 104.4 126 46.0
BolC7t41081H Brassica oleracea HOM05D004342 ORTHO05D042200 1.1e-20 104.4 126 46.0
A07p06040 Brassica napus HOM05D004342 ORTHO05D101341 5.5e-20 102.1 112 49.1
BraA07t28391Z Brassica rapa HOM05D004342 ORTHO05D014936 9.4e-20 101.3 83 63.9
BcaB01g01175 Brassica carinata HOM05D004342 ORTHO05D018601 1.2e-19 100.9 62 69.4
BcaC06g35994 Brassica carinata HOM05D004342 ORTHO05D027051 6.1e-19 98.6 60 78.3
A10p08150 Brassica napus HOM05D004342 ORTHO05D018674 6.1e-19 98.6 68 69.1
C03p67290 Brassica napus HOM05D004342 ORTHO05D033138 1.4e-18 97.4 179 36.9
BolSC21t60296H Brassica oleracea HOM05D004342 ORTHO05D033138 1.4e-18 97.4 179 36.9
BcaB08g35573 Brassica carinata HOM05D004342 ORTHO05D018674 5.2e-18 95.5 81 58.0
BcaC03g16937 Brassica carinata HOM05D004342 ORTHO05D027051 1.2e-17 94.4 77 62.3
C06p12600 Brassica napus HOM05D004342 ORTHO05D042454 2.0e-17 93.6 212 32.1
BraA06t25627Z Brassica rapa HOM05D004342 ORTHO05D107595 1.7e-16 90.5 73 57.5
C06p42390 Brassica napus HOM05D004342 ORTHO05D041978 3.7e-16 89.4 79 58.2
BraA03t15562Z Brassica rapa HOM05D004342 ORTHO05D014936 4.1e-15 85.9 67 67.2
BcaB02g10428 Brassica carinata HOM05D004342 ORTHO05D018674 1.5e-12 77.4 50 64.0
A07p06290 Brassica napus HOM05D004342 ORTHO05D099060 1.8e-10 70.5 119 36.1
BolC3t21022H Brassica oleracea HOM05D004342 ORTHO05D041047 6.8e-10 68.6 72 51.4
BolC5t33456H Brassica oleracea HOM05D004342 ORTHO05D042428 8.9e-10 68.2 121 37.2
BraA06t25007Z Brassica rapa HOM05D004342 ORTHO05D018601 4.9e-08 62.4 36 69.4
C07p09200 Brassica napus HOM05D004342 ORTHO05D096449 1.1e-07 61.2 35 80.0
BcaB07g33404 Brassica carinata HOM05D004342 ORTHO05D095904 5.4e-07 58.9 47 55.3
A07p01470 Brassica napus HOM05D004342 ORTHO05D042428 5.4e-07 58.9 37 75.7
C02p39700 Brassica napus HOM05D004342 ORTHO05D099964 9.2e-07 58.2 59 54.2


User provided reference genes

Program Settings