Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p32080 Brassica napus HOM05D012652 ORTHO05D018584 1.4e-96 356.3 180 100.0
BolC5t31935H Brassica oleracea HOM05D012652 ORTHO05D018584 1.4e-96 356.3 180 100.0
BcaC05g27722 Brassica carinata HOM05D012652 ORTHO05D018584 2.9e-94 348.6 180 97.8
BcaC01g05008 Brassica carinata HOM05D012652 ORTHO05D018584 1.1e-93 346.7 180 96.7
BraA01t02953Z Brassica rapa HOM05D012652 ORTHO05D018584 8.0e-44 181.0 150 68.7
A05p33480 Brassica napus HOM05D012652 ORTHO05D018584 3.0e-43 179.1 150 68.7
C05p37030 Brassica napus HOM05D012652 ORTHO05D018584 1.1e-37 160.6 83 97.6
C08p37410 Brassica napus HOM05D012652 ORTHO05D018584 2.7e-31 139.4 74 97.3
BraA09t36832Z Brassica rapa HOM05D012652 ORTHO05D000065 4.7e-28 128.6 74 89.2
BolC2t10639H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-21 106.7 73 78.1
BcaC02g10521 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-20 104.0 73 75.3
C02p45780 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-20 104.0 73 76.7
BolC4t24339H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-20 104.0 73 75.3
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 76.7
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
C04p27570 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 76.7
BolC4t24298H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 76.7
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 3.6e-20 102.4 73 71.2
BcaC03g15710 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-20 101.7 73 74.0
BolC2t09433H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-20 101.7 73 74.0
BolC4t27405H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-19 100.9 90 61.1
A10p11580 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-19 99.4 65 80.0
BolC1t03816H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-18 96.3 90 58.9
A09p29710 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-18 95.5 73 71.2
BraA09t38537Z Brassica rapa HOM05D000313 ORTHO05D000065 4.4e-18 95.5 73 71.2
BolC6t36579H Brassica oleracea HOM05D012652 ORTHO05D000065 2.9e-17 92.8 49 93.9
BcaC06g36574 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-17 92.4 73 67.1
C07p02730 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-17 91.7 143 44.8
BolC9t54482H Brassica oleracea HOM05D000313 ORTHO05D000065 5.9e-15 85.1 63 71.4
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-14 83.2 55 76.4
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-13 79.3 48 83.3
C08p02170 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-13 79.3 48 83.3
BcaC01g02399 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-12 76.3 51 76.5
A09p41280 Brassica napus HOM05D000313 ORTHO05D000065 3.6e-12 75.9 89 48.3
BcaC01g06199 Brassica carinata HOM05D016309 ORTHO05D021634 8.0e-12 74.7 63 63.5
BolC3t14219H Brassica oleracea HOM05D016309 ORTHO05D021634 8.0e-12 74.7 63 63.5
BcaC01g06195 Brassica carinata HOM05D016309 ORTHO05D021634 1.4e-11 73.9 63 63.5
BcaB06g27070 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-11 73.2 67 55.2
C04p45130 Brassica napus HOM05D003292 ORTHO05D033686 2.3e-11 73.2 51 70.6
BolC2t07194H Brassica oleracea HOM05D003292 ORTHO05D033686 2.3e-11 73.2 51 70.6
BolC4t26093H Brassica oleracea HOM05D003292 ORTHO05D033686 2.3e-11 73.2 51 70.6
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 5.2e-11 72.0 64 56.2
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 5.2e-11 72.0 70 54.3
BolC8t48144H Brassica oleracea HOM05D012652 ORTHO05D000065 5.2e-11 72.0 54 75.9
C07p40630 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-11 71.6 68 54.4
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 6.8e-11 71.6 80 45.0
C05p50150 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-10 70.9 68 54.4
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-10 70.1 66 51.5
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 4.4e-10 68.9 78 43.6
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-10 68.6 64 54.7
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 5.8e-10 68.6 70 51.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-09 67.4 64 51.6
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-09 67.4 64 51.6
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 2.2e-09 66.6 64 56.2
BcaB07g32742 Brassica carinata HOM05D000313 ORTHO05D027477 2.9e-09 66.2 66 57.6
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-09 66.2 70 51.4
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 2.9e-09 66.2 66 48.5
C05p56930 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-09 65.9 64 53.1
A05p34160 Brassica napus HOM05D000313 ORTHO05D000065 6.4e-09 65.1 85 48.2
C03p18180 Brassica napus HOM05D016309 ORTHO05D021634 6.4e-09 65.1 56 62.5
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 6.4e-09 65.1 66 48.5
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 8.3e-09 64.7 64 54.7
BcaC04g20219 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 63.5 64 48.4
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-08 63.5 67 52.2
C02p32630 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 63.5 39 82.1
C07p23090 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-08 63.5 39 82.1
BcaB02g11080 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 66 47.0
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 64 50.0
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 64 50.0
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 2.4e-08 63.2 65 47.7
BolC6t37553H Brassica oleracea HOM05D000313 ORTHO05D000065 2.4e-08 63.2 69 46.4
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 2.4e-08 63.2 70 51.4
BcaB03g15206 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-08 62.8 64 50.0
BcaC04g18606 Brassica carinata HOM05D000313 ORTHO05D000065 3.2e-08 62.8 70 50.0
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-08 62.8 64 50.0
A06p31400 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 64 48.4
C09p17240 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 39 79.5
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 4.1e-08 62.4 67 52.2
BolC9t54626H Brassica oleracea HOM05D000313 ORTHO05D000065 4.1e-08 62.4 39 79.5
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-08 62.0 64 48.4
C08p23390 Brassica napus HOM05D000313 ORTHO05D015528 5.4e-08 62.0 75 48.0
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 5.4e-08 62.0 64 48.4
BcaB07g33685 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-08 61.6 64 46.9
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 7.0e-08 61.6 64 46.9
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 7.0e-08 61.6 64 50.0
BraA07t30966Z Brassica rapa HOM05D000313 ORTHO05D000065 7.0e-08 61.6 39 79.5
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 7.0e-08 61.6 66 51.5
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 9.2e-08 61.2 64 46.9
A01p36390 Brassica napus HOM05D000096 ORTHO05D000045 9.2e-08 61.2 64 46.9
C03p91860 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-08 61.2 66 48.5
C08p23910 Brassica napus HOM05D000313 ORTHO05D000065 9.2e-08 61.2 66 53.0
BcaB05g24116 Brassica carinata HOM05D000313 ORTHO05D000065 1.2e-07 60.8 75 45.3
BcaC08g45120 Brassica carinata HOM05D000313 ORTHO05D039164 1.2e-07 60.8 53 64.2
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 64 46.9
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 64 46.9
C04p33330 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-07 60.8 69 44.9
BolC7t42461H Brassica oleracea HOM05D000313 ORTHO05D000065 1.2e-07 60.8 39 76.9
BraA01t04317Z Brassica rapa HOM05D000313 ORTHO05D000065 1.2e-07 60.8 64 46.9
BcaB01g00816 Brassica carinata HOM05D000313 ORTHO05D000065 1.6e-07 60.5 63 54.0
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 60.5 64 48.4
C06p50290 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-07 60.5 66 47.0
C08p24710 Brassica napus HOM05D010481 ORTHO05D017627 1.6e-07 60.5 67 49.3
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-07 60.5 64 48.4
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 1.6e-07 60.5 70 48.6
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 64 46.9
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 64 48.4
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 2.0e-07 60.1 66 43.9
A01p33580 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 70 50.0
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-07 60.1 81 40.7
BcaB04g18160 Brassica carinata HOM05D012652 ORTHO05D000065 2.7e-07 59.7 46 67.4
BcaC05g28890 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-07 59.7 70 47.1
BcaC07g39432 Brassica carinata HOM05D010481 ORTHO05D017627 2.7e-07 59.7 107 38.3
BcaC09g48412 Brassica carinata HOM05D000313 ORTHO05D000065 2.7e-07 59.7 64 46.9
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-07 59.7 64 46.9
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-07 59.7 64 46.9
BolC2t10736H Brassica oleracea HOM05D010481 ORTHO05D017627 2.7e-07 59.7 71 46.5
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-07 59.3 64 45.3
BcaC07g39367 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-07 59.3 70 50.0
C09p57200 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-07 59.3 63 54.0
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-07 59.3 64 46.9
A04p07460 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-07 58.9 70 45.7
A08p06180 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-07 58.9 70 45.7
C07p19990 Brassica napus HOM05D010481 ORTHO05D017627 4.6e-07 58.9 66 48.5
BolC7t42518H Brassica oleracea HOM05D010481 ORTHO05D017627 4.6e-07 58.9 66 48.5
BolC8t50085H Brassica oleracea HOM05D010481 ORTHO05D017627 4.6e-07 58.9 66 48.5
A08p07610 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-07 58.5 66 47.0
BolC5t33765H Brassica oleracea HOM05D000313 ORTHO05D000065 6.0e-07 58.5 64 50.0
C06p23850 Brassica napus HOM05D000313 ORTHO05D000065 7.8e-07 58.2 69 43.5
BolC1t02301H Brassica oleracea HOM05D000313 ORTHO05D000065 7.8e-07 58.2 82 37.8
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 1.0e-06 57.8 66 42.4
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-06 57.8 70 48.6
BcaC08g44549 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 68 44.1
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-06 57.4 64 45.3
BcaC01g00015 Brassica carinata HOM05D000313 ORTHO05D000065 1.7e-06 57.0 66 43.9
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 64 43.8
C03p74810 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 66 43.9
C09p62680 Brassica napus HOM05D000313 ORTHO05D000065 1.7e-06 57.0 64 43.8
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.7e-06 57.0 63 47.6
BcaC02g12357 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
A05p21270 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
C03p72030 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 68 42.6
C04p04790 Brassica napus HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.6 64 43.8
BolC4t22110H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-06 56.6 74 40.5
BcaC05g28354 Brassica carinata HOM05D000313 ORTHO05D000065 3.0e-06 56.2 71 40.8
C04p30210 Brassica napus HOM05D000313 ORTHO05D000065 3.0e-06 56.2 40 70.0
BolC4t24553H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 56.2 40 70.0
BolC7t43682H Brassica oleracea HOM05D000313 ORTHO05D000065 3.0e-06 56.2 74 40.5
BcaC02g08554 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 73 41.1
BcaC02g08920 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
BcaC04g20831 Brassica carinata HOM05D000313 ORTHO05D000065 3.9e-06 55.8 73 41.1
A10p12060 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
C04p49110 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
C09p38710 Brassica napus HOM05D000313 ORTHO05D000065 3.9e-06 55.8 73 41.1
BolC4t26494H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-06 55.8 74 40.5
BolC9t56725H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-06 55.8 73 41.1
BcaB02g10989 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-06 55.5 69 43.5
BcaB07g30333 Brassica carinata HOM05D000313 ORTHO05D000065 5.0e-06 55.5 44 68.2
BcaB07g33821 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 74 40.5
BcaC06g34590 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 53 56.6
BcaNung02812 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 55.1 67 41.8
BolC9t57786H Brassica oleracea HOM05D032470 ORTHO05D027477 6.6e-06 55.1 62 54.8
BraA08t32776Z Brassica rapa HOM05D000313 ORTHO05D000065 6.6e-06 55.1 69 43.5
BraA09t39507Z Brassica rapa HOM05D000313 ORTHO05D000065 8.6e-06 54.7 73 41.1


User provided reference genes

Program Settings