Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 3.4e-273 944.5 508 100.0
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 3.4e-273 944.5 508 100.0
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 2.7e-270 934.9 508 99.2
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 1.1e-268 929.5 508 98.4
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 2.3e-253 878.6 480 98.1
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 2.1e-251 872.1 508 94.3
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 2.8e-251 871.7 508 92.7
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 6.4e-248 860.5 508 92.3
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 1.3e-245 852.8 508 90.6
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 1.3e-245 852.8 508 91.5
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 6.6e-245 850.5 508 90.6
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 1.2e-243 846.3 509 90.8
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 2.1e-243 845.5 509 91.4
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 3.4e-241 838.2 503 90.1
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 8.3e-240 833.6 509 90.4
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 1.7e-237 825.9 494 90.1
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 1.7e-237 825.9 494 90.1
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 6.6e-237 823.9 494 90.3
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 2.5e-228 795.4 510 84.9
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 2.4e-223 778.9 512 83.0
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 8.7e-205 717.2 461 82.0
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 1.5e-204 716.5 458 82.3
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 1.6e-203 713.0 459 82.4
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 2.1e-203 712.6 461 80.7
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 8.2e-203 710.7 458 81.9
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 8.2e-203 710.7 508 75.0
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 2.4e-202 709.1 461 80.3
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 3.1e-202 708.8 444 85.1
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 4.0e-202 708.4 461 80.5
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 9.0e-202 707.2 455 82.6
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 2.6e-201 705.7 459 81.5
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 3.8e-200 701.8 459 81.7
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 6.5e-200 701.0 458 81.4
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.9e-199 699.5 461 78.7
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.9e-199 699.5 456 81.8
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 2.5e-199 699.1 497 75.7
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 3.2e-199 698.7 505 74.3
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 3.2e-199 698.7 470 78.1
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 9.3e-199 697.2 505 74.1
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 1.2e-198 696.8 476 78.8
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.6e-198 696.4 458 80.1
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 2.7e-198 695.7 435 82.8
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 7.9e-198 694.1 457 79.9
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 8.7e-197 690.6 452 80.1
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 9.7e-196 687.2 515 73.2
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 2.8e-195 685.6 455 79.3
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 4.8e-195 684.9 458 79.3
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.1e-194 682.2 485 76.1
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 5.3e-194 681.4 457 78.6
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 5.3e-194 681.4 444 80.6
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 6.9e-194 681.0 508 73.0
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 9.0e-194 680.6 485 75.9
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 9.0e-194 680.6 444 81.1
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 2.0e-193 679.5 469 77.4
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 2.0e-193 679.5 485 75.7
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 4.5e-193 678.3 456 79.6
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 7.7e-193 677.6 442 80.3
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 7.7e-193 677.6 482 75.5
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.3e-192 676.8 474 76.6
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 1.7e-192 676.4 515 70.9
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 3.8e-192 675.2 413 84.7
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 3.8e-192 675.2 476 76.1
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 8.5e-192 674.1 431 81.4
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 1.9e-191 672.9 512 72.1
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 1.9e-191 672.9 445 79.1
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 3.2e-191 672.2 507 72.2
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 9.4e-191 670.6 436 79.6
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 9.4e-191 670.6 487 74.5
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 9.4e-191 670.6 462 77.5
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.2e-190 670.2 464 77.6
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 1.6e-190 669.8 515 70.7
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 3.6e-190 668.7 505 72.3
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 1.4e-189 666.8 510 72.2
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 3.0e-189 665.6 433 79.4
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 8.8e-189 664.1 458 77.7
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 8.8e-189 664.1 468 75.0
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 1.1e-188 663.7 464 74.6
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 3.3e-188 662.1 462 76.4
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 4.3e-188 661.8 503 71.4
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 7.4e-188 661.0 435 78.4
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 1.3e-187 660.2 518 69.3
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 2.2e-187 659.4 467 76.0
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 1.4e-186 656.8 460 76.7
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.4e-186 656.8 480 74.2
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 5.3e-186 654.8 513 69.2
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 9.1e-186 654.1 515 71.5
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 7.7e-185 651.0 468 73.7
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 1.0e-184 650.6 457 75.9
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 1.3e-184 650.2 406 82.8
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 1.3e-184 650.2 459 74.5
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.2e-184 649.4 404 83.7
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 8.5e-184 647.5 446 76.2
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 4.2e-183 645.2 464 74.4
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 9.4e-183 644.0 499 70.5
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.6e-182 643.3 457 74.0
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 4.7e-182 641.7 429 78.6
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 7.9e-182 641.0 421 79.6
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 8.8e-181 637.5 457 74.0
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 4.8e-179 631.7 466 71.7
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.1e-178 630.6 459 72.5
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 3.1e-178 629.0 416 77.4
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.0e-176 624.0 471 72.0
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 1.4e-175 620.2 461 72.5
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 1.6e-174 616.7 422 76.5
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 1.8e-173 613.2 442 74.9
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 3.0e-173 612.5 435 74.0
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 4.8e-171 605.1 497 67.8
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.4e-170 603.6 457 71.3
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.2e-166 590.5 416 71.2
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 2.6e-164 582.8 495 68.1
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 5.7e-164 581.6 433 72.3
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 4.5e-161 572.0 472 67.2
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 7.7e-161 571.2 422 75.1
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 4.1e-154 548.9 444 67.3
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 4.1e-154 548.9 444 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 1.0e-141 507.7 422 62.3
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.2e-137 494.2 500 56.4
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 2.3e-133 479.9 441 59.4
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 1.5e-132 477.2 376 71.5
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 2.8e-126 456.4 341 69.8
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.8e-118 429.9 365 61.6
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 1.8e-117 427.2 316 69.9
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 2.2e-107 393.7 230 91.7
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 2.1e-94 350.5 415 48.0
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 6.0e-89 332.4 422 47.6
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.6e-86 324.3 266 65.4
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.9e-80 303.1 356 53.7
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 2.6e-76 290.4 415 41.0
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 6.7e-72 275.8 386 39.4
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 4.8e-70 269.6 236 69.5
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.5e-68 264.6 156 91.0
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 3.9e-64 250.0 200 64.5
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 4.8e-62 243.0 395 34.9
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 2.5e-58 230.7 374 36.4
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 3.0e-56 223.8 453 37.3
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 1.8e-53 214.5 162 70.4
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 1.2e-52 211.8 264 48.1
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 1.4e-40 171.8 145 67.6
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.2e-39 168.7 126 65.9
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 4.9e-30 136.7 86 80.2
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 4.6e-28 130.2 110 61.8
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 2.5e-26 124.4 125 55.2
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 9.8e-23 112.5 97 68.0
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.0e-19 102.4 93 60.2
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 5.0e-19 100.1 386 25.4
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 1.1e-13 82.4 423 26.2
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 7.8e-12 76.3 221 29.0
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 8.1e-09 66.2 67 58.2


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