Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31499H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-63 245.0 123 100.0
BcaC05g26925 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-62 242.7 123 99.2
BcaC01g01267 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-38 162.9 115 69.6
BolC3t21319H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-38 162.9 115 69.6
BolC7t41060H Brassica oleracea HOM05D000003 ORTHO05D001498 4.5e-38 161.4 123 62.6
BcaB07g33892 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-34 149.8 123 57.7
BcaB05g24269 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-31 138.7 116 56.9
BcaB01g06093 Brassica carinata HOM05D000003 ORTHO05D001498 9.0e-31 137.1 109 71.6
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-29 133.7 118 55.1
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-29 131.0 118 53.4
BcaB07g32761 Brassica carinata HOM05D000003 ORTHO05D001498 8.4e-29 130.6 118 52.5
A05p25020 Brassica napus HOM05D000003 ORTHO05D001498 8.4e-29 130.6 121 52.9
BcaC06g35751 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-28 129.0 121 52.1
BolC7t41603H Brassica oleracea HOM05D000003 ORTHO05D001498 2.5e-28 129.0 121 52.1
BraA10t43514Z Brassica rapa HOM05D000003 ORTHO05D001498 4.2e-28 128.3 116 51.7
BcaC01g02062 Brassica carinata HOM05D000003 ORTHO05D001498 7.1e-28 127.5 121 53.7
C04p27500 Brassica napus HOM05D000003 ORTHO05D001498 9.3e-28 127.1 121 53.7
A01p24260 Brassica napus HOM05D000003 ORTHO05D001498 1.2e-27 126.7 116 51.7
BolC1t04389H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-27 126.7 116 51.7
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-27 125.2 119 49.6
BcaB05g24488 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-27 124.8 121 50.4
BcaC04g21923 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-27 124.8 121 52.1
BcaC09g50917 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-26 122.5 116 49.1
BolC5t31802H Brassica oleracea HOM05D000003 ORTHO05D001498 2.3e-26 122.5 117 49.6
BcaC06g34125 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-26 122.1 117 50.4
BraA01t00843Z Brassica rapa HOM05D000003 ORTHO05D001498 3.9e-26 121.7 107 55.1
BraA02t08383Z Brassica rapa HOM05D000003 ORTHO05D001498 8.7e-26 120.6 116 52.6
C05p30710 Brassica napus HOM05D000003 ORTHO05D001498 1.9e-25 119.4 117 48.7
BraA03t14295Z Brassica rapa HOM05D000003 ORTHO05D001498 2.5e-25 119.0 116 50.0
BcaC08g44709 Brassica carinata HOM05D000003 ORTHO05D001498 3.3e-25 118.6 116 55.2
BcaB03g11737 Brassica carinata HOM05D000003 ORTHO05D001498 5.7e-25 117.9 121 50.4
BcaC03g14322 Brassica carinata HOM05D000003 ORTHO05D001498 7.4e-25 117.5 116 48.3
BcaC05g28342 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-24 116.3 107 50.5
BcaC04g21023 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-24 115.9 116 47.4
BcaC07g37622 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-24 115.5 116 50.0
BcaB02g11485 Brassica carinata HOM05D000003 ORTHO05D011793 3.7e-24 115.2 123 54.5
BcaC01g02414 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-24 114.8 110 51.8
BolC1t05049H Brassica oleracea HOM05D000003 ORTHO05D001498 6.3e-24 114.4 104 53.8
A07p08900 Brassica napus HOM05D000003 ORTHO05D001498 8.2e-24 114.0 101 55.4
BolC8t47986H Brassica oleracea HOM05D000003 ORTHO05D001498 8.2e-24 114.0 97 55.7
BolC2t10141H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-23 113.2 124 47.6
BolC2t10628H Brassica oleracea HOM05D000003 ORTHO05D001498 4.1e-23 111.7 118 44.1
BolC4t24029H Brassica oleracea HOM05D000003 ORTHO05D001498 4.1e-23 111.7 118 44.1
BcaB02g11061 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-23 111.3 116 46.6
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 9.0e-23 110.5 116 48.3
BcaC03g16311 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-22 110.2 114 45.6
BcaB07g32454 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-22 109.8 101 50.5
BolC3t19098H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-22 109.8 118 43.2
BcaB07g33382 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-22 107.8 121 44.6
BolC3t15769H Brassica oleracea HOM05D000003 ORTHO05D001498 1.3e-21 106.7 109 48.6
BolC9t56575H Brassica oleracea HOM05D000003 ORTHO05D001498 2.2e-21 105.9 118 42.4
BolC4t25964H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-20 103.6 123 44.7
BcaNung02475 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-20 102.1 116 44.8
BcaB07g33522 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-20 101.3 117 47.0
Thhalv10009535m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 5.5e-20 101.3 103 49.5
BcaC04g20578 Brassica carinata HOM05D000003 ORTHO05D001498 9.3e-20 100.5 116 47.4
BraA01t02339Z Brassica rapa HOM05D000003 ORTHO05D001498 6.1e-19 97.8 116 44.0
AT5G19270 Arabidopsis thaliana HOM05D000003 ORTHO05D001498 3.0e-18 95.5 119 42.0
BcaB02g11065 Brassica carinata HOM05D000003 ORTHO05D001498 3.0e-18 95.5 116 42.2
BolC1t04313H Brassica oleracea HOM05D000003 ORTHO05D001498 6.7e-18 94.4 64 75.0
BraA01t02684Z Brassica rapa HOM05D000003 ORTHO05D001498 6.7e-18 94.4 92 47.8
AL5G23780 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.9e-17 92.8 116 42.2
CARHR104190 Cardamine hirsuta HOM05D000003 ORTHO05D001498 2.5e-17 92.4 116 37.9
BolC1t01233H Brassica oleracea HOM05D000003 ORTHO05D001498 4.3e-17 91.7 92 46.7
BcaC04g21305 Brassica carinata HOM05D000003 ORTHO05D001498 7.4e-17 90.9 97 49.5
AL8G40900 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.7e-16 89.7 112 45.5
AL9U10510 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 4.5e-14 81.6 107 40.2
BcaC05g24726 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-13 79.0 93 45.2
AL3G21600 Arabidopsis lyrata HOM05D003944 ORTHO05D005521 5.0e-13 78.2 111 40.5
BolC6t38050H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-12 77.0 95 41.1
BcaC04g19733 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-12 76.6 116 38.8
C04p57830 Brassica napus HOM05D011995 ORTHO05D013945 1.4e-12 76.6 109 37.6
BolC1t04159H Brassica oleracea HOM05D000003 ORTHO05D011793 3.2e-12 75.5 41 87.8
BolC9t55765H Brassica oleracea HOM05D000003 ORTHO05D001498 7.2e-12 74.3 55 56.4
C06p28800 Brassica napus HOM05D001537 ORTHO05D002595 1.2e-11 73.6 93 40.9
BolC5t32877H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-11 73.6 122 32.8
BraA01t03967Z Brassica rapa HOM05D000003 ORTHO05D043090 1.2e-11 73.6 99 44.4
BraA09t38509Z Brassica rapa HOM05D000003 ORTHO05D001498 2.7e-11 72.4 68 57.4
BcaC03g17446 Brassica carinata HOM05D000003 ORTHO05D001498 7.9e-11 70.9 60 60.0
BolC5t33760H Brassica oleracea HOM05D000003 ORTHO05D001498 7.9e-11 70.9 58 60.3
BolC6t38701H Brassica oleracea HOM05D000003 ORTHO05D043090 1.0e-10 70.5 103 35.9
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-10 70.1 122 32.0
C05p30010 Brassica napus HOM05D000003 ORTHO05D033128 2.3e-10 69.3 64 50.0
BolC5t31738H Brassica oleracea HOM05D000003 ORTHO05D001498 2.3e-10 69.3 64 50.0
BolC2t07768H Brassica oleracea HOM05D000003 ORTHO05D001498 3.0e-10 68.9 107 35.5
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 3.9e-10 68.6 121 31.4
BcaC08g45277 Brassica carinata HOM05D000003 ORTHO05D001498 6.7e-10 67.8 106 36.8
BolC7t42070H Brassica oleracea HOM05D000003 ORTHO05D001498 6.7e-10 67.8 107 34.6
AL4G33730 Arabidopsis lyrata HOM05D000419 ORTHO05D000692 8.8e-10 67.4 94 37.2
BcaC08g46350 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-10 67.4 122 32.0
BolC6t39352H Brassica oleracea HOM05D000003 ORTHO05D001498 8.8e-10 67.4 122 32.0
BcaB08g34533 Brassica carinata HOM05D000003 ORTHO05D027432 1.1e-09 67.0 101 34.7
BcaC09g51327 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-09 67.0 49 63.3
BcaNung05100 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-09 67.0 109 37.6
CARHR034550 Cardamine hirsuta HOM05D000003 ORTHO05D001498 2.6e-09 65.9 105 35.2
CARHR217290 Cardamine hirsuta HOM05D000003 ORTHO05D001498 2.6e-09 65.9 81 39.5
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 3.3e-09 65.5 110 33.6
AL4G21420 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 4.4e-09 65.1 85 42.4
BcaB06g26978 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-09 65.1 117 34.2
BcaB08g34832 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-09 65.1 117 34.2
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 7.4e-09 64.3 91 38.5
BolC1t05416H Brassica oleracea HOM05D000003 ORTHO05D027432 7.4e-09 64.3 99 34.3
BcaC04g19472 Brassica carinata HOM05D000003 ORTHO05D001498 9.7e-09 63.9 122 30.3
CARHR035000 Cardamine hirsuta HOM05D000003 ORTHO05D001498 9.7e-09 63.9 79 36.7
BolC9t53858H Brassica oleracea HOM05D000003 ORTHO05D001498 1.7e-08 63.2 116 34.5
BcaC07g36989 Brassica carinata HOM05D000003 ORTHO05D013515 2.8e-08 62.4 115 30.4
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 2.8e-08 62.4 100 34.0
Aa31LG10G9450 Aethionema arabicum HOM05D000003 ORTHO05D001091 4.8e-08 61.6 84 34.5
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-08 61.6 109 35.8
BolC9t55478H Brassica oleracea HOM05D000003 ORTHO05D001498 4.8e-08 61.6 41 70.7
Aa31LG3G4630 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.3e-08 61.2 108 32.4
BcaC01g01141 Brassica carinata HOM05D000003 ORTHO05D001498 6.3e-08 61.2 76 35.5
C06p40810 Brassica napus HOM05D000003 ORTHO05D001498 6.3e-08 61.2 123 30.9
BolC3t21163H Brassica oleracea HOM05D000003 ORTHO05D001498 6.3e-08 61.2 76 35.5
BolC7t43894H Brassica oleracea HOM05D000003 ORTHO05D001498 6.3e-08 61.2 65 40.0
Sp2g02350 Schrenkiella parvula HOM05D000003 ORTHO05D001498 6.3e-08 61.2 94 33.0
BolC3t19157H Brassica oleracea HOM05D000003 ORTHO05D001498 8.2e-08 60.8 41 70.7
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-07 60.5 106 32.1
BolC3t17202H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-07 60.5 115 32.2
BolC7t44523H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-07 60.5 60 43.3
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-07 59.7 108 32.4
BcaC09g50790 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-07 59.7 105 33.3
AL5G20730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 2.4e-07 59.3 61 42.6
BraA06t25797Z Brassica rapa HOM05D000003 ORTHO05D001498 2.4e-07 59.3 122 32.0
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-07 58.9 106 31.1
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-07 58.9 111 31.5
BcaC01g05506 Brassica carinata HOM05D000003 ORTHO05D001498 3.1e-07 58.9 110 30.0
C03p88530 Brassica napus HOM05D000003 ORTHO05D001498 3.1e-07 58.9 61 37.7
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-07 58.5 106 29.2
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 5.3e-07 58.2 95 34.7
BcaC06g36425 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-07 58.2 111 30.6
BolC6t35402H Brassica oleracea HOM05D000003 ORTHO05D001498 5.3e-07 58.2 119 32.8
BcaB04g17934 Brassica carinata HOM05D000003 ORTHO05D012821 7.0e-07 57.8 112 29.5
BcaC05g24575 Brassica carinata HOM05D000003 ORTHO05D001498 7.0e-07 57.8 115 29.6
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 7.0e-07 57.8 104 29.8
Thhalv10009777m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 7.0e-07 57.8 100 30.0
Aa31LG7G12310 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-06 57.0 104 29.8
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 57.0 119 33.6
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 57.0 95 33.7
BolC5t32128H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-06 57.0 62 53.2
BcaB07g33176 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-06 56.6 115 31.3
A05p28700 Brassica napus HOM05D000003 ORTHO05D001498 1.5e-06 56.6 41 61.0
BolC2t11594H Brassica oleracea HOM05D000003 ORTHO05D001498 1.5e-06 56.6 119 30.3
BraA06t24982Z Brassica rapa HOM05D000003 ORTHO05D001498 1.5e-06 56.6 107 34.6
Thhalv10026817m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 1.5e-06 56.6 100 29.0
BcaB03g16306 Brassica carinata HOM05D000003 ORTHO05D027432 2.0e-06 56.2 96 34.4
BcaC03g14008 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-06 56.2 118 31.4
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 2.0e-06 56.2 105 34.3
Aa31LG3G3940 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-06 55.8 89 36.0
BcaB08g36133 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-06 55.8 105 32.4
BcaC06g35612 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-06 55.8 115 33.0
BcaNung00269 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-06 55.8 93 37.6
C04p19460 Brassica napus HOM05D000003 ORTHO05D001498 2.6e-06 55.8 119 31.1
Aa31sc85G50 Aethionema arabicum HOM05D000003 ORTHO05D001091 3.4e-06 55.5 104 26.9
BcaB07g33613 Brassica carinata HOM05D000003 ORTHO05D000004 3.4e-06 55.5 101 32.7
BcaB08g36343 Brassica carinata HOM05D000003 ORTHO05D001498 3.4e-06 55.5 91 35.2
BcaC02g12838 Brassica carinata HOM05D000003 ORTHO05D001498 3.4e-06 55.5 91 29.7
C05p40580 Brassica napus HOM05D000003 ORTHO05D001498 3.4e-06 55.5 119 31.9
BolC5t32797H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-06 55.5 119 31.9
BolC9t59471H Brassica oleracea HOM05D000003 ORTHO05D027495 3.4e-06 55.5 122 29.5
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 4.5e-06 55.1 108 34.3
BcaC02g09323 Brassica carinata HOM05D027210 ORTHO05D021777 4.5e-06 55.1 109 31.2
A04p30070 Brassica napus HOM05D027210 ORTHO05D021777 4.5e-06 55.1 87 33.3
BraA09t39092Z Brassica rapa HOM05D000003 ORTHO05D001498 4.5e-06 55.1 105 31.4
BcaB04g18838 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-06 54.7 107 32.7
BcaC06g35222 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-06 54.7 91 33.0
BcaC09g51803 Brassica carinata HOM05D000003 ORTHO05D001498 5.9e-06 54.7 107 29.9
BolC2t08137H Brassica oleracea HOM05D001350 ORTHO05D001091 5.9e-06 54.7 90 28.9
BcaC09g49254 Brassica carinata HOM05D000003 ORTHO05D001498 7.7e-06 54.3 104 29.8


User provided reference genes

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