Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31476H Brassica oleracea HOM05D010973 ORTHO05D014088 1.0e-91 340.1 178 100.0
BolC7t43813H Brassica oleracea HOM05D010973 ORTHO05D014088 1.3e-86 323.2 175 97.1
C05p27560 Brassica napus HOM05D010973 ORTHO05D014088 3.7e-78 295.0 168 93.5
BcaC06g34075 Brassica carinata HOM05D010973 ORTHO05D014088 1.0e-75 287.0 180 88.9
BolC9t57788H Brassica oleracea HOM05D010973 ORTHO05D014088 1.1e-66 256.9 227 67.4
C09p49360 Brassica napus HOM05D010973 ORTHO05D014088 3.3e-66 255.4 227 67.0
BcaC03g13719 Brassica carinata HOM05D010973 ORTHO05D014088 2.1e-65 252.7 227 67.0
C02p25290 Brassica napus HOM05D010973 ORTHO05D014088 2.6e-63 245.7 227 64.8
BcaC06g34072 Brassica carinata HOM05D010973 ORTHO05D014088 3.2e-61 238.8 149 88.6
C08p19170 Brassica napus HOM05D010973 ORTHO05D014088 1.6e-60 236.5 212 67.5
BcaC07g38975 Brassica carinata HOM05D010973 ORTHO05D014088 7.8e-60 234.2 218 65.6
C02p31140 Brassica napus HOM05D010973 ORTHO05D014088 1.3e-59 233.4 230 63.9
BcaC05g26903 Brassica carinata HOM05D010973 ORTHO05D014088 6.4e-54 214.5 175 72.6
BcaC06g34074 Brassica carinata HOM05D010973 ORTHO05D014088 8.5e-30 134.4 98 80.6
BcaB03g13985 Brassica carinata HOM05D010973 ORTHO05D014088 3.9e-27 125.6 123 64.2
Thhalv10011596m.g Eutrema salsugineum HOM05D002316 ORTHO05D002280 2.7e-20 102.8 90 62.2
C06p09030 Brassica napus HOM05D002316 ORTHO05D002280 6.1e-20 101.7 95 61.1
AL1G61670 Arabidopsis lyrata HOM05D002316 ORTHO05D002280 1.8e-19 100.1 89 61.8
BolC6t35981H Brassica oleracea HOM05D002316 ORTHO05D002280 1.8e-19 100.1 95 60.0
BcaC08g43517 Brassica carinata HOM05D002316 ORTHO05D002280 3.0e-19 99.4 178 41.0
A06p01090 Brassica napus HOM05D002316 ORTHO05D002280 1.1e-18 97.4 90 62.2
BraA06t23336Z Brassica rapa HOM05D002316 ORTHO05D002280 1.1e-18 97.4 90 62.2
Aa31LG10G1890 Aethionema arabicum HOM05D002316 ORTHO05D002280 3.3e-18 95.9 99 50.5
C03p91300 Brassica napus HOM05D002316 ORTHO05D002280 8.2e-17 91.3 101 60.4
Sp1g39830 Schrenkiella parvula HOM05D002316 ORTHO05D002280 8.2e-17 91.3 73 65.8
BcaB04g17097 Brassica carinata HOM05D002316 ORTHO05D002280 1.1e-16 90.9 92 64.1
BcaC01g01372 Brassica carinata HOM05D002316 ORTHO05D002280 2.4e-16 89.7 101 59.4
BolC3t21445H Brassica oleracea HOM05D002316 ORTHO05D002280 4.1e-16 89.0 186 40.9
BraA08t32224Z Brassica rapa HOM05D002316 ORTHO05D002280 2.0e-15 86.7 155 43.9
AT1G53250 Arabidopsis thaliana HOM05D002316 ORTHO05D002280 8.5e-14 81.3 71 60.6
Carub.0001s4244 Capsella rubella HOM05D002316 ORTHO05D002280 1.9e-13 80.1 73 58.9
A08p01710 Brassica napus HOM05D002316 ORTHO05D002280 2.5e-13 79.7 147 40.8
CAN.G292.5 Capsicum annuum HOM05D002316 ORTHO05D002280 4.2e-13 79.0 98 45.9
Solyc12g014220.3 Solanum lycopersicum HOM05D002316 ORTHO05D002280 1.6e-12 77.0 89 48.3
Lj8A150T53 Lonicera japonica HOM05D002316 ORTHO05D002280 3.6e-12 75.9 98 42.9
Peaxi162Scf00934g00148 Petunia axillaris HOM05D002316 ORTHO05D002280 3.6e-12 75.9 89 48.3
Cpa.g.sc131.59 Carica papaya HOM05D002316 ORTHO05D002280 6.1e-12 75.1 98 43.9
Sopen12g006010 Solanum pennellii HOM05D002316 ORTHO05D002280 6.1e-12 75.1 89 46.1
CARHR043490 Cardamine hirsuta HOM05D002316 ORTHO05D002280 1.4e-11 73.9 95 47.4
Nitab4.5_0000035g0100 Nicotiana tabacum HOM05D002316 ORTHO05D002280 3.9e-11 72.4 104 42.3
GSVIVG01014224001 Vitis vinifera HOM05D002316 ORTHO05D002280 5.2e-11 72.0 94 44.7
PGSC0003DMG400015334 Solanum tuberosum HOM05D002316 ORTHO05D002280 8.8e-11 71.2 89 44.9
Manes.02G100500 Manihot esculenta HOM05D002316 ORTHO05D002280 4.4e-10 68.9 94 41.5
Dinv14972 Davidia involucrata HOM05D002316 ORTHO05D002280 7.4e-10 68.2 98 37.8
Nitab4.5_0005440g0080 Nicotiana tabacum HOM05D002316 ORTHO05D002280 1.3e-09 67.4 83 45.8
Nn1g09090 Nelumbo nucifera HOM05D002316 ORTHO05D002280 3.7e-09 65.9 121 38.0
Potri.011G112300 Populus trichocarpa HOM05D002316 ORTHO05D002280 6.3e-09 65.1 94 41.5
COL.COLO4_17596 Corchorus olitorius HOM05D002316 ORTHO05D002280 1.1e-08 64.3 104 38.5
MBI06_g25991_MAGBIO Magnolia biondii HOM05D002316 ORTHO05D002280 1.1e-08 64.3 98 40.8
EL10Ac4g08303 Beta vulgaris HOM05D002316 ORTHO05D002280 4.1e-08 62.4 95 38.9
Migut.H01980 Erythranthe guttata HOM05D002316 ORTHO05D002280 7.0e-08 61.6 98 37.8
Gohir.D13G153100 Gossypium hirsutum HOM05D002316 ORTHO05D002280 7.0e-08 61.6 99 38.4
Gorai.013G173000 Gossypium raimondii HOM05D002316 ORTHO05D002280 7.0e-08 61.6 99 38.4
AUR62038474 Chenopodium quinoa HOM05D002316 ORTHO05D002280 9.1e-08 61.2 90 37.8
Thecc.07G106400 Theobroma cacao HOM05D002316 ORTHO05D002280 9.1e-08 61.2 93 40.9
Duzib213G0315 Durio zibethinus HOM05D002316 ORTHO05D002280 1.2e-07 60.8 89 40.4
FAN21G3617 Fragaria x ananassa HOM05D002316 ORTHO05D002280 1.2e-07 60.8 120 39.2
Lsat_1_v5_gn_5_127320 Lactuca sativa HOM05D000043 ORTHO05D009639 1.2e-07 60.8 89 40.4
ECA234G4357 Erigeron canadensis HOM05D002316 ORTHO05D002280 1.6e-07 60.5 91 37.4
CSS0043472 Camellia sinensis var. sinensis HOM05D002316 ORTHO05D002280 2.0e-07 60.1 90 38.9
Cc05_g11320 Coffea canephora HOM05D002316 ORTHO05D002280 2.0e-07 60.1 149 32.9
THA.LOC104810445 Tarenaya hassleriana HOM05D002316 ORTHO05D002280 2.0e-07 60.1 96 36.5
Gohir.A13G148550 Gossypium hirsutum HOM05D002316 ORTHO05D002280 3.5e-07 59.3 95 37.9
PSO782G0144 Papaver somniferum HOM05D002478 ORTHO05D002280 5.9e-07 58.5 86 40.7
DCAR_017163 Daucus carota HOM05D002316 ORTHO05D002280 7.7e-07 58.2 95 35.8
Hma1.2p1_0607F.1_g188170 Hydrangea macrophylla HOM05D002316 ORTHO05D002280 7.7e-07 58.2 72 38.9
vmacro11915 Vaccinium macrocarpon HOM05D002316 ORTHO05D002280 7.7e-07 58.2 134 32.1
Oeu061346.1 Olea europaea HOM05D002316 ORTHO05D002280 2.9e-06 56.2 96 39.6
ATR0733G115 Amborella trichopoda HOM05D002316 ORTHO05D002280 3.8e-06 55.8 99 39.4
Duzib213G0761 Durio zibethinus HOM05D002316 ORTHO05D002280 3.8e-06 55.8 68 45.6
TAR624G0302 Trochodendron aralioides HOM05D002316 ORTHO05D002280 8.5e-06 54.7 94 36.2


User provided reference genes

Program Settings