Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31419H Brassica oleracea HOM05D000171 ORTHO05D023693 8.4e-44 179.9 85 100.0
BcaC05g26826 Brassica carinata HOM05D000171 ORTHO05D023693 1.9e-43 178.7 85 98.8
A09p37860 Brassica napus HOM05D000171 ORTHO05D000101 4.6e-42 174.1 85 96.5
BraA09t39298Z Brassica rapa HOM05D000171 ORTHO05D000101 6.0e-42 173.7 85 95.3
BcaB07g32429 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-31 137.9 86 77.9
BraA09t39297Z Brassica rapa HOM05D000171 ORTHO05D000101 5.8e-21 104.0 77 66.2
C03p75240 Brassica napus HOM05D000171 ORTHO05D000101 9.3e-19 96.7 82 51.2
A08p25530 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-18 95.9 83 53.0
BraA08t34506Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-18 95.9 83 53.0
C03p02300 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-15 86.3 66 54.5
Carub.0218s0001 Capsella rubella HOM05D000171 ORTHO05D023693 4.8e-15 84.3 76 48.7
Thhalv10009752m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-14 82.8 74 56.8
A10p24780 Brassica napus HOM05D000171 ORTHO05D000101 1.8e-14 82.4 82 45.1
Thhalv10009344m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-14 82.4 82 47.6
Carub.0002s0570 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-14 82.0 71 52.1
AT1G59690 Arabidopsis thaliana HOM05D000171 ORTHO05D023693 4.1e-14 81.3 74 52.7
BraA08t34528Z Brassica rapa HOM05D000171 ORTHO05D000101 3.4e-13 78.2 81 53.1
AL6G29130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.0e-12 76.6 82 47.6
Thhalv10002973m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-12 75.9 81 46.9
Thhalv10009643m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.2e-12 75.5 71 53.5
BcaB01g00207 Brassica carinata HOM05D000171 ORTHO05D000101 3.8e-12 74.7 83 41.0
A09p37850 Brassica napus HOM05D000171 ORTHO05D000101 3.8e-12 74.7 45 73.3
AL1G66270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-12 74.3 74 51.4
Carub.0002s0572 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-11 72.4 81 46.9
Thhalv10015870m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.2e-11 71.6 74 44.6
BolC3t12781H Brassica oleracea HOM05D000171 ORTHO05D000101 9.4e-11 70.1 71 43.7
BolC3t19739H Brassica oleracea HOM05D000171 ORTHO05D000101 1.6e-10 69.3 71 53.5
Carub.0006s1624 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-10 68.9 77 45.5
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.1e-10 67.4 73 38.4
Carub.0002s0571 Capsella rubella HOM05D000171 ORTHO05D000101 6.1e-10 67.4 84 44.0
BolC3t19773H Brassica oleracea HOM05D000171 ORTHO05D000101 1.8e-09 65.9 58 62.1
BolC3t19783H Brassica oleracea HOM05D000171 ORTHO05D000101 3.0e-09 65.1 82 40.2
BraA08t34535Z Brassica rapa HOM05D000171 ORTHO05D000101 3.3e-08 61.6 82 42.7
AL6G29140 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-08 61.2 70 38.6
AL6G29360 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-08 61.2 70 38.6
AT5G18160 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.3e-08 61.2 70 35.7
Carub.0004s1064 Capsella rubella HOM05D000171 ORTHO05D023693 4.3e-08 61.2 76 32.9
A08p25800 Brassica napus HOM05D000171 ORTHO05D000101 5.7e-08 60.8 82 42.7
AL1G58610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.7e-08 60.1 79 34.2
AL2G17240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-07 59.7 76 42.1
BcaC01g00017 Brassica carinata HOM05D000171 ORTHO05D000101 1.3e-07 59.7 74 44.6
BolC3t19733H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-07 59.7 74 44.6
AT3G06280 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.7e-07 59.3 72 41.7
AL4G33150 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.7e-07 58.2 71 35.2
BolC3t18120H Brassica oleracea HOM05D000171 ORTHO05D000101 4.8e-07 57.8 70 38.6
C03p58590 Brassica napus HOM05D000171 ORTHO05D000101 6.3e-07 57.4 69 39.1
BcaC05g26056 Brassica carinata HOM05D000171 ORTHO05D000101 8.2e-07 57.0 74 37.8
C05p20350 Brassica napus HOM05D000171 ORTHO05D000101 8.2e-07 57.0 74 37.8
CARHR194900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.2e-07 57.0 66 39.4
CARHR040900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.1e-06 56.6 69 37.7
BcaB07g32138 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-06 55.8 70 35.7
BcaNung05623 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-06 55.8 69 33.3
AT1G47730 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-06 55.5 72 36.1
Carub.0002s0083 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-06 55.5 79 32.9
CARHR037850 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.1e-06 55.1 72 34.7
Thhalv10000505m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.1e-06 55.1 75 33.3
AT4G21240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-06 54.7 77 35.1
Thhalv10027439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.3e-06 54.3 77 37.7
A06p17520 Brassica napus HOM05D000987 ORTHO05D000831 6.9e-06 53.9 74 37.8
BraA06t24848Z Brassica rapa HOM05D000987 ORTHO05D000831 6.9e-06 53.9 74 37.8
AL1G54580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.1e-06 53.5 73 34.2


User provided reference genes

Program Settings