Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31418H Brassica oleracea HOM05D000171 ORTHO05D000101 1.7e-81 305.8 143 100.0
BcaB07g32429 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-49 199.1 166 62.0
A09p37860 Brassica napus HOM05D000171 ORTHO05D000101 4.4e-45 184.9 167 58.1
BraA09t39298Z Brassica rapa HOM05D000171 ORTHO05D000101 5.7e-45 184.5 167 57.5
A09p37850 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-40 167.2 123 66.7
BraA09t39297Z Brassica rapa HOM05D000171 ORTHO05D000101 9.5e-40 167.2 123 66.7
BolC3t19783H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-30 136.7 154 50.6
BolC3t19773H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-29 132.9 123 58.5
BraA08t34528Z Brassica rapa HOM05D000171 ORTHO05D000101 2.6e-29 132.5 125 58.4
A08p25530 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-28 127.9 173 44.5
A10p24780 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-28 127.9 114 53.5
C03p75240 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-27 127.1 173 45.1
BraA08t34506Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-27 127.1 173 44.5
Sp1g24400 Schrenkiella parvula HOM05D000171 ORTHO05D000101 4.1e-27 125.2 96 64.6
C03p74900 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-24 114.0 110 58.2
BolC3t19739H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-23 113.6 98 62.2
Thhalv10009752m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-23 113.2 128 51.6
BcaB01g00207 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-22 110.5 124 50.0
AL6G29130 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.5e-21 104.4 125 46.4
AL2G17240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 9.8e-21 104.0 123 45.5
BcaB01g05923 Brassica carinata HOM05D000171 ORTHO05D000101 9.8e-21 104.0 124 50.0
BolC3t12781H Brassica oleracea HOM05D000171 ORTHO05D000101 9.8e-21 104.0 124 50.0
C03p02300 Brassica napus HOM05D000171 ORTHO05D000101 3.7e-20 102.1 124 49.2
A08p25800 Brassica napus HOM05D000171 ORTHO05D000101 8.3e-20 100.9 99 56.6
C03p74840 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-19 100.1 99 54.5
BolC3t19733H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-19 99.4 99 54.5
BraA08t34535Z Brassica rapa HOM05D000171 ORTHO05D000101 3.2e-19 99.0 99 55.6
BcaC01g00017 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-18 97.1 99 53.5
Thhalv10009643m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.5e-18 95.5 107 47.7
AL1G66270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.0e-17 91.7 104 44.2
Thhalv10015829m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.0e-17 91.7 122 41.0
A03p28520 Brassica napus HOM05D000171 ORTHO05D000101 2.5e-16 89.4 125 40.8
Thhalv10029328m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-16 87.8 124 37.9
BraA03t12054Z Brassica rapa HOM05D000171 ORTHO05D000101 2.8e-15 85.9 125 39.2
Carub.0002s0571 Capsella rubella HOM05D000171 ORTHO05D000101 3.6e-15 85.5 129 35.7
BcaC01g04723 Brassica carinata HOM05D000171 ORTHO05D000101 6.2e-15 84.7 125 39.2
C03p34440 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-15 84.7 125 40.0
C03p34470 Brassica napus HOM05D000171 ORTHO05D000101 6.2e-15 84.7 125 39.2
BolC3t15758H Brassica oleracea HOM05D000171 ORTHO05D000101 6.2e-15 84.7 125 39.2
BolC3t15760H Brassica oleracea HOM05D000171 ORTHO05D000101 6.2e-15 84.7 125 39.2
Carub.0002s0570 Capsella rubella HOM05D000171 ORTHO05D000101 8.1e-15 84.3 126 37.3
Thhalv10002973m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-14 82.0 107 44.9
Carub.0002s0572 Capsella rubella HOM05D000171 ORTHO05D000101 6.8e-14 81.3 132 36.4
BcaB01g02793 Brassica carinata HOM05D000171 ORTHO05D000101 2.0e-13 79.7 125 38.4
BolC3t15753H Brassica oleracea HOM05D000171 ORTHO05D000101 2.0e-13 79.7 125 38.4
Thhalv10012180m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.4e-13 79.0 114 42.1
CARHR037720 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.8e-13 78.2 107 35.5
AL1G54580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.9e-12 75.1 121 35.5
BcaC06g36300 Brassica carinata HOM05D000088 ORTHO05D000933 6.4e-12 74.7 95 43.2
C07p05620 Brassica napus HOM05D000171 ORTHO05D000101 6.4e-12 74.7 95 43.2
BolC7t40961H Brassica oleracea HOM05D000171 ORTHO05D000101 6.4e-12 74.7 95 43.2
AT4G09190 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.4e-11 72.8 128 40.6
Carub.0004s1097 Capsella rubella HOM05D000171 ORTHO05D000101 3.2e-11 72.4 119 37.0
AT1G47790 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.1e-11 72.0 113 40.7
AL3G17170 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.4e-11 71.6 122 34.4
AL3G53950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.1e-11 71.2 107 37.4
Thhalv10027439m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.1e-11 71.2 114 36.8
Carub.0006s1624 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-10 70.5 131 35.1
Thhalv10029264m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-10 70.5 94 44.7
BraA07t28132Z Brassica rapa HOM05D000171 ORTHO05D000101 1.6e-10 70.1 96 41.7
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-10 70.1 105 41.9
Sp1g37770 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.6e-10 70.1 107 36.4
THA.LOC104799108 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 2.1e-10 69.7 120 35.0
BcaC02g08657 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-10 69.3 129 31.8
BcaC02g08658 Brassica carinata HOM05D000171 ORTHO05D000101 2.7e-10 69.3 129 31.8
AL6G42950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.5e-10 68.9 128 40.6
Sp1g34800 Schrenkiella parvula HOM05D000171 ORTHO05D000101 3.5e-10 68.9 111 36.9
A08p25570 Brassica napus HOM05D000171 ORTHO05D040688 4.6e-10 68.6 61 55.7
BraA08t34509Z Brassica rapa HOM05D000171 ORTHO05D040688 4.6e-10 68.6 61 55.7
A06p02840 Brassica napus HOM05D000171 ORTHO05D000101 6.0e-10 68.2 108 39.8
BraA06t23491Z Brassica rapa HOM05D000171 ORTHO05D000101 6.0e-10 68.2 108 39.8
A04p16950 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-10 67.8 105 33.3
BraA03t10159Z Brassica rapa HOM05D000171 ORTHO05D000101 1.0e-09 67.4 102 39.2
CARHR037710 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-09 67.4 101 38.6
BolC4t26742H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-09 67.0 105 33.3
BraA04t17325Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-09 67.0 105 33.3
CARHR037850 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.3e-09 67.0 106 33.0
THA.LOC104814678 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 1.3e-09 67.0 102 39.2
AL4G33150 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-09 66.6 120 33.3
Thhalv10012059m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.3e-09 66.2 115 37.4
BcaB07g33529 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-09 65.5 96 36.5
BraA03t10160Z Brassica rapa HOM05D000171 ORTHO05D000101 3.9e-09 65.5 102 36.3
BcaNung03087 Brassica carinata HOM05D000171 ORTHO05D000101 5.1e-09 65.1 122 32.0
A03p08400 Brassica napus HOM05D000171 ORTHO05D000101 5.1e-09 65.1 102 36.3
A04p20720 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-09 64.7 129 29.5
BolC5t31420H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-09 64.7 46 67.4
BraA04t17645Z Brassica rapa HOM05D000171 ORTHO05D000101 6.6e-09 64.7 129 29.5
BcaB01g02794 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-09 64.3 91 45.1
BcaB03g12104 Brassica carinata HOM05D000171 ORTHO05D000101 8.6e-09 64.3 75 48.0
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 8.6e-09 64.3 119 34.5
AT1G47730 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-08 63.9 105 30.5
AT3G04660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.1e-08 63.9 120 31.7
CARHR040900 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.1e-08 63.9 104 33.7
Thhalv10000505m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-08 63.9 93 40.9
BcaC02g08701 Brassica carinata HOM05D000171 ORTHO05D000101 3.3e-08 62.4 105 31.4
Carub.0218s0001 Capsella rubella HOM05D000171 ORTHO05D023693 3.3e-08 62.4 88 36.4
AL2G11100 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-08 62.0 131 35.1
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-08 62.0 121 34.7
AT1G50870 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.3e-08 62.0 94 36.2
BcaC05g26731 Brassica carinata HOM05D000171 ORTHO05D000101 4.3e-08 62.0 98 34.7
C06p06060 Brassica napus HOM05D000171 ORTHO05D000101 4.3e-08 62.0 120 34.2
Carub.0001s3982 Capsella rubella HOM05D000171 ORTHO05D000101 5.6e-08 61.6 109 35.8
Thhalv10009934m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.6e-08 61.6 118 33.9
AL2G15380 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-08 61.2 95 35.8
BolC6t35719H Brassica oleracea HOM05D000171 ORTHO05D000101 7.3e-08 61.2 120 34.2
Carub.0004s0537 Capsella rubella HOM05D000171 ORTHO05D000101 7.3e-08 61.2 93 36.6
CARHR147780 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.3e-08 61.2 96 36.5
Thhalv10022001m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.3e-08 61.2 135 32.6
AT4G21240 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.5e-08 60.8 117 32.5
A03p18390 Brassica napus HOM05D000171 ORTHO05D000101 9.5e-08 60.8 86 40.7
BraA03t11102Z Brassica rapa HOM05D000171 ORTHO05D000101 9.5e-08 60.8 86 40.7
Carub.0001s3672 Capsella rubella HOM05D000171 ORTHO05D000101 9.5e-08 60.8 120 37.5
AL3G14710 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-07 60.5 84 35.7
AL3G14720 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-07 60.5 92 34.8
AL4G11240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-07 60.5 86 38.4
BNapus_Darmor_BZH_scaffold_118p00140 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-07 60.5 108 32.4
Thhalv10015621m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-07 60.5 123 30.9
Aa31LG6G7120 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.6e-07 60.1 87 33.3
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.6e-07 60.1 123 35.8
BcaB02g11190 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-07 60.1 111 35.1
C05p33250 Brassica napus HOM05D000171 ORTHO05D000101 1.6e-07 60.1 110 35.5
Carub.0001s3666 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-07 60.1 95 33.7
Carub.0001s3670 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-07 60.1 95 35.8
Carub.0007s2700 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-07 60.1 103 31.1
BolC5t32050H Brassica oleracea HOM05D000171 ORTHO05D000101 2.1e-07 59.7 110 35.5
BraA01t04439Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-07 59.7 108 32.4
THA.LOC104800494 Tarenaya hassleriana HOM05D000171 ORTHO05D000101 2.1e-07 59.7 95 33.7
AL1G54620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-07 59.3 95 34.7
AT3G10990 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.8e-07 59.3 116 32.8
BcaC01g06613 Brassica carinata HOM05D000171 ORTHO05D000101 2.8e-07 59.3 105 32.4
CARHR042940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.8e-07 59.3 131 30.5
AL9U11210 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-07 58.9 116 30.2
A05p43010 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-07 58.9 122 32.8
A09p03250 Brassica napus HOM05D000482 ORTHO05D000349 3.6e-07 58.9 93 39.8
BraA09t35963Z Brassica rapa HOM05D000482 ORTHO05D000349 3.6e-07 58.9 93 39.8
AT2G13630 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.7e-07 58.5 115 30.4
A04p16520 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-07 58.5 95 36.8
A04p24260 Brassica napus HOM05D000171 ORTHO05D000101 4.7e-07 58.5 131 29.8
BraA04t17288Z Brassica rapa HOM05D000171 ORTHO05D000101 4.7e-07 58.5 95 36.8
Carub.0001s3981 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-07 58.5 111 29.7
Carub.0004s0538 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-07 58.5 94 36.2
Carub.0004s0106 Capsella rubella HOM05D000171 ORTHO05D000101 6.2e-07 58.2 97 35.1
Thecc.03G007700 Theobroma cacao HOM05D000171 ORTHO05D000101 6.2e-07 58.2 97 29.9
AL2G16580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.1e-07 57.8 129 31.0
AL3G22290 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 8.1e-07 57.8 110 32.7
BcaB01g00382 Brassica carinata HOM05D000171 ORTHO05D000101 8.1e-07 57.8 95 32.6
BcaC02g07989 Brassica carinata HOM05D000171 ORTHO05D000101 8.1e-07 57.8 116 30.2
A04p24680 Brassica napus HOM05D000171 ORTHO05D000101 8.1e-07 57.8 99 30.3
AL7G22270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-06 57.4 91 31.9
A09p16070 Brassica napus HOM05D000171 ORTHO05D000101 1.1e-06 57.4 89 37.1
BolC1t05729H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-06 57.4 82 31.7
BraA09t37243Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-06 57.4 89 37.1
BraA10t42360Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-06 57.4 135 30.4
Carub.0004s0102 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.4 119 31.9
Carub.0004s0107 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 57.4 85 37.6
Thhalv10009344m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.1e-06 57.4 87 41.4
Sp1g02140 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.1e-06 57.4 104 34.6
A09p45340 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-06 57.0 94 33.0
C04p61010 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-06 57.0 105 31.4
C04p61040 Brassica napus HOM05D000171 ORTHO05D000101 1.4e-06 57.0 105 31.4
BolC4t27589H Brassica oleracea HOM05D000171 ORTHO05D000101 1.4e-06 57.0 105 31.4
BraA05t23045Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-06 57.0 122 32.0
BraA09t39998Z Brassica rapa HOM05D000171 ORTHO05D000101 1.4e-06 57.0 94 33.0
BcaC08g47087 Brassica carinata HOM05D000171 ORTHO05D000101 1.8e-06 56.6 86 33.7
BraA06t26112Z Brassica rapa HOM05D000171 ORTHO05D000101 1.8e-06 56.6 84 39.3
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-06 56.2 123 30.9
BcaC06g31875 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-06 56.2 117 33.3
A06p31800 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-06 56.2 84 39.3
Carub.0004s0100 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-06 56.2 85 36.5
Carub.0007s1067 Capsella rubella HOM05D000171 ORTHO05D000101 2.4e-06 56.2 107 33.6
Thhalv10003356m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.4e-06 56.2 82 39.0
Aa31LG4G12430 Aethionema arabicum HOM05D000171 ORTHO05D000101 3.1e-06 55.8 122 35.2
BcaB01g03312 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-06 55.8 86 34.9
BcaB07g32138 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-06 55.8 95 35.8
BcaC02g07953 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-06 55.8 110 30.0
BcaC06g36593 Brassica carinata HOM05D000171 ORTHO05D000101 3.1e-06 55.8 87 40.2
C04p61570 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-06 55.8 111 31.5
C07p02550 Brassica napus HOM05D000171 ORTHO05D000101 3.1e-06 55.8 87 40.2
BolC7t40653H Brassica oleracea HOM05D000171 ORTHO05D000101 3.1e-06 55.8 87 40.2
BraA09t39997Z Brassica rapa HOM05D000171 ORTHO05D000101 4.0e-06 55.5 94 33.0
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-06 55.5 113 32.7
BcaC02g07924 Brassica carinata HOM05D000171 ORTHO05D000101 5.2e-06 55.1 102 32.4
C04p61900 Brassica napus HOM05D000171 ORTHO05D000101 5.2e-06 55.1 102 32.4
Carub.0003s0941 Capsella rubella HOM05D000171 ORTHO05D000101 5.2e-06 55.1 88 35.2
AT1G32660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 6.8e-06 54.7 88 38.6
BcaC01g04725 Brassica carinata HOM05D003178 ORTHO05D003636 6.8e-06 54.7 81 38.3
C03p84150 Brassica napus HOM05D000171 ORTHO05D000101 6.8e-06 54.7 84 38.1
BraA05t20343Z Brassica rapa HOM05D000171 ORTHO05D000101 6.8e-06 54.7 128 28.1
BraA04t17945Z Brassica rapa HOM05D000171 ORTHO05D000101 8.9e-06 54.3 131 29.0
Carub.0001s3717 Capsella rubella HOM05D000171 ORTHO05D000101 8.9e-06 54.3 116 31.9


User provided reference genes

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