Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31358H Brassica oleracea HOM05D010185 ORTHO05D015459 1.5e-89 332.8 167 100.0
BraA07t28028Z Brassica rapa HOM05D010185 ORTHO05D015459 2.2e-48 196.1 180 58.3
BraA07t27837Z Brassica rapa HOM05D000003 ORTHO05D000004 9.3e-47 190.7 185 58.4
A01p35560 Brassica napus HOM05D010185 ORTHO05D015459 7.9e-38 161.0 95 83.2
BraA01t04229Z Brassica rapa HOM05D000003 ORTHO05D000006 1.2e-30 137.1 67 97.0
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 1.6e-30 136.7 152 52.0
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 7.9e-30 134.4 159 47.8
BraA04t16683Z Brassica rapa HOM05D000496 ORTHO05D000411 3.9e-29 132.1 279 31.5
BcaC06g36207 Brassica carinata HOM05D000003 ORTHO05D015459 2.0e-28 129.8 123 56.1
BraA04t15790Z Brassica rapa HOM05D009214 ORTHO05D027438 3.3e-28 129.0 165 48.5
C07p06470 Brassica napus HOM05D010185 ORTHO05D015459 4.4e-28 128.6 95 66.3
A04p28190 Brassica napus HOM05D010185 ORTHO05D016098 8.2e-27 124.4 166 44.6
A09p12700 Brassica napus HOM05D011474 ORTHO05D016098 2.4e-26 122.9 151 45.7
BolC5t34093H Brassica oleracea HOM05D010185 ORTHO05D000411 5.3e-26 121.7 151 49.0
BolC5t34388H Brassica oleracea HOM05D009214 ORTHO05D000411 5.3e-26 121.7 180 41.7
BolC8t49529H Brassica oleracea HOM05D000496 ORTHO05D000411 5.3e-26 121.7 218 33.5
BraA06t26209Z Brassica rapa HOM05D010185 ORTHO05D015459 6.9e-26 121.3 92 63.0
BcaC06g36164 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-26 120.9 253 33.6
BcaB02g08512 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-25 119.8 255 33.7
BraA08t32635Z Brassica rapa HOM05D010185 ORTHO05D015459 2.0e-25 119.8 92 65.2
BolC9t57308H Brassica oleracea HOM05D010185 ORTHO05D015459 5.9e-25 118.2 92 64.1
BraA02t05709Z Brassica rapa HOM05D011474 ORTHO05D016098 7.7e-25 117.9 148 45.3
BcaC04g20372 Brassica carinata HOM05D010185 ORTHO05D015459 1.0e-24 117.5 92 63.0
BcaC09g48310 Brassica carinata HOM05D000003 ORTHO05D000006 3.8e-24 115.5 218 37.2
C02p20270 Brassica napus HOM05D009214 ORTHO05D000411 3.8e-24 115.5 195 35.4
A02p15120 Brassica napus HOM05D009214 ORTHO05D013521 6.5e-24 114.8 195 34.9
BcaB01g06142 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-23 114.0 263 31.9
BcaB07g33425 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-23 112.1 275 32.7
C02p52220 Brassica napus HOM05D009214 ORTHO05D013521 2.7e-22 109.4 188 35.1
BolC5t29151H Brassica oleracea HOM05D000496 ORTHO05D016098 2.7e-22 109.4 183 42.6
A03p15520 Brassica napus HOM05D010185 ORTHO05D015459 6.1e-22 108.2 93 59.1
BcaB01g00821 Brassica carinata HOM05D010185 ORTHO05D015459 1.0e-21 107.5 91 61.5
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-21 105.1 273 31.5
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-20 104.0 253 31.2
BcaB02g11325 Brassica carinata HOM05D009214 ORTHO05D013521 9.7e-20 100.9 151 41.1
BraA08t32636Z Brassica rapa HOM05D020256 ORTHO05D000411 9.7e-20 100.9 62 75.8
BcaC03g17105 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-19 100.5 266 32.0
C02p51670 Brassica napus HOM05D009214 ORTHO05D000411 2.2e-19 99.8 168 39.3
BcaB03g14160 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-19 99.4 252 29.4
BolC7t43207H Brassica oleracea HOM05D000496 ORTHO05D000411 3.7e-19 99.0 99 52.5
BolC6t35665H Brassica oleracea HOM05D009214 ORTHO05D013521 4.8e-19 98.6 152 39.5
BcaB02g09878 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-19 98.2 252 30.2
AL1G24220 Arabidopsis lyrata HOM05D010764 ORTHO05D000411 1.4e-18 97.1 164 43.3
BcaC08g46847 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-18 96.7 275 30.2
BcaC04g21213 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-18 96.3 253 29.6
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 5.3e-18 95.1 253 29.2
BolC2t11809H Brassica oleracea HOM05D000496 ORTHO05D000411 5.3e-18 95.1 272 29.0
BcaC03g15116 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-17 93.6 254 30.3
A06p43710 Brassica napus HOM05D000496 ORTHO05D000411 2.6e-17 92.8 261 28.4
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 1.0e-16 90.9 255 28.2
A02p27000 Brassica napus HOM05D009214 ORTHO05D016098 1.7e-16 90.1 147 38.1
BcaB05g25017 Brassica carinata HOM05D011474 ORTHO05D000006 2.2e-16 89.7 161 39.1
BcaC05g29414 Brassica carinata HOM05D020256 ORTHO05D000411 2.9e-16 89.4 164 41.5
BcaC09g48140 Brassica carinata HOM05D020256 ORTHO05D000411 2.9e-16 89.4 164 41.5
BraA02t07715Z Brassica rapa HOM05D010185 ORTHO05D016098 3.8e-16 89.0 147 38.1
A04p11750 Brassica napus HOM05D009214 ORTHO05D024265 5.0e-16 88.6 94 53.2
BolC7t42883H Brassica oleracea HOM05D000496 ORTHO05D000411 1.1e-15 87.4 273 27.5
BcaC04g23888 Brassica carinata HOM05D011474 ORTHO05D027115 1.9e-15 86.7 162 35.2
BcaC07g36967 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-15 86.3 266 29.3
BcaC07g38676 Brassica carinata HOM05D000496 ORTHO05D000411 2.5e-15 86.3 256 26.6
Sp7g02720 Schrenkiella parvula HOM05D009214 ORTHO05D000411 3.2e-15 85.9 199 33.7
BcaC08g42936 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-15 84.7 256 26.6
BolC4t25083H Brassica oleracea HOM05D009214 ORTHO05D024265 7.2e-15 84.7 94 51.1
BcaC05g25993 Brassica carinata HOM05D000003 ORTHO05D000006 9.4e-15 84.3 78 52.6
BolC7t43206H Brassica oleracea HOM05D020256 ORTHO05D000411 1.6e-14 83.6 62 58.1
BraA03t09650Z Brassica rapa HOM05D000496 ORTHO05D000411 1.6e-14 83.6 266 25.9
C05p16970 Brassica napus HOM05D009214 ORTHO05D024265 3.6e-14 82.4 94 51.1
BcaC08g42860 Brassica carinata HOM05D011474 ORTHO05D027115 8.0e-14 81.3 162 34.6
BolC1t01721H Brassica oleracea HOM05D000496 ORTHO05D000411 1.0e-13 80.9 281 26.0
C05p39170 Brassica napus HOM05D000496 ORTHO05D000411 1.8e-13 80.1 124 38.7
BolC3t21595H Brassica oleracea HOM05D000496 ORTHO05D000411 1.8e-13 80.1 259 25.5
BcaC07g40069 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-13 78.6 67 53.7
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 8.8e-13 77.8 77 50.6
BcaB08g35777 Brassica carinata HOM05D000496 ORTHO05D000411 1.5e-12 77.0 67 52.2
A06p09390 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-12 77.0 68 58.8
BcaC06g34876 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-12 76.6 71 53.5
BolC9t57656H Brassica oleracea HOM05D000496 ORTHO05D000411 2.0e-12 76.6 216 25.9
BolC8t46808H Brassica oleracea HOM05D010185 ORTHO05D000411 3.3e-12 75.9 85 49.4
BcaB05g24570 Brassica carinata HOM05D000496 ORTHO05D000411 5.7e-12 75.1 92 47.8
BraA04t16370Z Brassica rapa HOM05D020256 ORTHO05D000411 7.5e-12 74.7 98 46.9
Thhalv10029191m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 9.7e-12 74.3 261 25.3
BcaB08g34848 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-11 73.9 68 58.8
BolC3t20253H Brassica oleracea HOM05D010185 ORTHO05D016098 1.3e-11 73.9 75 46.7
A05p25540 Brassica napus HOM05D009214 ORTHO05D013521 2.2e-11 73.2 101 43.6
BcaB04g17684 Brassica carinata HOM05D000003 ORTHO05D021670 2.8e-11 72.8 126 38.9
C03p90150 Brassica napus HOM05D009521 ORTHO05D000411 2.8e-11 72.8 75 53.3
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 8.2e-11 71.2 95 43.2
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-10 70.1 197 27.9
BolC8t47401H Brassica oleracea HOM05D009521 ORTHO05D013247 1.8e-10 70.1 54 61.1
A03p57130 Brassica napus HOM05D009214 ORTHO05D000411 2.4e-10 69.7 78 44.9
C06p05580 Brassica napus HOM05D009214 ORTHO05D013521 2.4e-10 69.7 85 43.5
BolC4t24907H Brassica oleracea HOM05D020256 ORTHO05D000411 2.4e-10 69.7 65 55.4
BcaC03g17805 Brassica carinata HOM05D009214 ORTHO05D013521 4.1e-10 68.9 174 33.3
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 4.1e-10 68.9 116 39.7
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 7.0e-10 68.2 78 46.2
C03p80010 Brassica napus HOM05D010185 ORTHO05D016098 7.0e-10 68.2 89 38.2
BolC5t33965H Brassica oleracea HOM05D010764 ORTHO05D016724 7.0e-10 68.2 83 43.4
C05p04150 Brassica napus HOM05D000496 ORTHO05D000411 9.1e-10 67.8 92 40.2
C06p28390 Brassica napus HOM05D000496 ORTHO05D000411 9.1e-10 67.8 92 40.2
BcaC03g17398 Brassica carinata HOM05D000003 ORTHO05D000006 1.6e-09 67.0 81 43.2
BolC9t57397H Brassica oleracea HOM05D009214 ORTHO05D013521 1.6e-09 67.0 94 39.4
BcaB08g34738 Brassica carinata HOM05D010185 ORTHO05D016098 2.0e-09 66.6 106 42.5
BolC8t47004H Brassica oleracea HOM05D009521 ORTHO05D013247 2.0e-09 66.6 95 42.1
Thhalv10002806m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 2.0e-09 66.6 268 24.6
BcaB02g10743 Brassica carinata HOM05D010185 ORTHO05D000006 2.7e-09 66.2 86 40.7
BolC7t42162H Brassica oleracea HOM05D009214 ORTHO05D013521 2.7e-09 66.2 103 39.8
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 3.5e-09 65.9 103 39.8
BolC2t11019H Brassica oleracea HOM05D009214 ORTHO05D013521 5.9e-09 65.1 80 42.5
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 7.7e-09 64.7 93 46.2
C03p18340 Brassica napus HOM05D009521 ORTHO05D013247 7.7e-09 64.7 62 54.8
C09p39470 Brassica napus HOM05D027236 ORTHO05D031963 1.0e-08 64.3 67 50.7
BolC4t25472H Brassica oleracea HOM05D010185 ORTHO05D015459 1.0e-08 64.3 44 79.5
BolC9t56821H Brassica oleracea HOM05D027236 ORTHO05D031963 1.0e-08 64.3 67 50.7
BolC9t58221H Brassica oleracea HOM05D009214 ORTHO05D013521 1.0e-08 64.3 76 46.1
BcaC01g00333 Brassica carinata HOM05D010764 ORTHO05D003091 1.3e-08 63.9 101 37.6
BcaC02g07975 Brassica carinata HOM05D010764 ORTHO05D016724 1.3e-08 63.9 155 31.0
BcaB05g24571 Brassica carinata HOM05D000003 ORTHO05D000006 1.7e-08 63.5 96 36.5
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 1.7e-08 63.5 169 29.0
BolC9t59648H Brassica oleracea HOM05D000759 ORTHO05D000574 1.7e-08 63.5 83 42.2
C06p01420 Brassica napus HOM05D000003 ORTHO05D000006 2.2e-08 63.2 71 45.1
BolC7t44560H Brassica oleracea HOM05D000496 ORTHO05D000411 2.2e-08 63.2 120 39.2
BcaC07g37122 Brassica carinata HOM05D009214 ORTHO05D027576 2.9e-08 62.8 94 40.4
C06p17800 Brassica napus HOM05D010764 ORTHO05D016724 2.9e-08 62.8 99 39.4
BolC5t31092H Brassica oleracea HOM05D007244 ORTHO05D024493 2.9e-08 62.8 108 36.1
C02p47150 Brassica napus HOM05D010764 ORTHO05D016724 3.8e-08 62.4 80 42.5
C03p32630 Brassica napus HOM05D000496 ORTHO05D000411 3.8e-08 62.4 82 39.0
Thhalv10027079m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 5.0e-08 62.0 229 25.3
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 6.5e-08 61.6 95 44.2
BcaC02g11021 Brassica carinata HOM05D000003 ORTHO05D000925 6.5e-08 61.6 90 42.2
BolC6t35884H Brassica oleracea HOM05D000496 ORTHO05D013247 6.5e-08 61.6 82 45.1
Thhalv10003106m.g Eutrema salsugineum HOM05D008416 ORTHO05D010671 8.5e-08 61.2 71 46.5
BcaC08g46823 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-07 60.8 31 83.9
BraA03t10622Z Brassica rapa HOM05D009521 ORTHO05D013247 1.1e-07 60.8 47 66.0
BraA03t15653Z Brassica rapa HOM05D010593 ORTHO05D016054 1.1e-07 60.8 173 27.7
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 1.9e-07 60.1 110 34.5
Thhalv10003487m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.9e-07 60.1 74 47.3
BcaB03g14070 Brassica carinata HOM05D010764 ORTHO05D000411 2.5e-07 59.7 54 55.6
BolC7t45625H Brassica oleracea HOM05D010764 ORTHO05D016724 2.5e-07 59.7 86 39.5
BcaB06g28004 Brassica carinata HOM05D000003 ORTHO05D000006 3.2e-07 59.3 84 39.3
BolC2t11253H Brassica oleracea HOM05D000496 ORTHO05D000411 3.2e-07 59.3 71 45.1
BcaB04g17691 Brassica carinata HOM05D000496 ORTHO05D000411 7.2e-07 58.2 111 31.5
BcaB07g30348 Brassica carinata HOM05D010764 ORTHO05D016724 9.4e-07 57.8 160 31.9
BcaC09g48334 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-06 57.4 180 27.8
C02p64250 Brassica napus HOM05D009521 ORTHO05D039737 1.2e-06 57.4 97 41.2
BcaB04g17991 Brassica carinata HOM05D000496 ORTHO05D000411 1.6e-06 57.0 70 47.1
Thhalv10027498m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 1.6e-06 57.0 85 36.5
BcaC05g29079 Brassica carinata HOM05D010764 ORTHO05D016724 2.7e-06 56.2 150 30.0
BolC2t06006H Brassica oleracea HOM05D010185 ORTHO05D027115 2.7e-06 56.2 87 42.5
BcaC07g38371 Brassica carinata HOM05D009521 ORTHO05D027438 3.6e-06 55.8 96 41.7
Sp4g07330 Schrenkiella parvula HOM05D000496 ORTHO05D000411 4.7e-06 55.5 50 60.0
BcaB01g05566 Brassica carinata HOM05D009214 ORTHO05D000411 6.1e-06 55.1 67 34.3
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 6.1e-06 55.1 78 41.0
BcaC07g37489 Brassica carinata HOM05D000496 ORTHO05D000411 6.1e-06 55.1 144 29.2
BcaC08g47582 Brassica carinata HOM05D010764 ORTHO05D016724 6.1e-06 55.1 167 29.3


User provided reference genes

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