Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 1.7e-123 446.0 230 100.0
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 6.0e-113 411.0 230 94.8
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 5.7e-103 377.9 206 94.2
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.7e-102 376.3 205 95.1
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.9e-98 362.8 187 99.5
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 6.7e-96 354.4 205 90.2
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 6.7e-96 354.4 205 90.2
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 2.0e-95 352.8 205 89.8
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 2.0e-95 352.8 205 90.7
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 2.0e-95 352.8 205 90.7
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 2.0e-95 352.8 205 90.7
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 1.4e-93 346.7 205 88.8
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 1.4e-93 346.7 205 89.8
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.8e-93 346.3 205 88.8
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 2.6e-92 342.4 205 87.3
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 2.6e-92 342.4 204 87.7
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 2.8e-86 322.4 210 81.0
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 5.3e-85 318.2 187 89.8
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 2.2e-83 312.8 202 83.2
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 1.5e-79 300.1 210 74.3
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.0e-60 236.5 214 62.1
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.0e-59 234.2 208 61.1
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 2.9e-59 232.6 210 61.9
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 5.0e-59 231.9 212 63.7
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 5.0e-59 231.9 221 62.4
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 5.0e-59 231.9 210 61.0
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 5.0e-59 231.9 223 60.1
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 6.6e-59 231.5 211 60.2
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 8.6e-59 231.1 213 61.5
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 8.6e-59 231.1 205 62.4
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 8.6e-59 231.1 209 61.7
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.5e-58 230.3 209 61.7
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 2.5e-58 229.6 205 60.0
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 3.3e-58 229.2 214 61.7
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 5.6e-58 228.4 227 57.3
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 7.3e-58 228.0 213 59.6
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 7.3e-58 228.0 212 59.4
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 7.3e-58 228.0 212 59.4
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 7.3e-58 228.0 217 60.8
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 7.3e-58 228.0 210 60.5
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 7.3e-58 228.0 210 60.0
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.6e-57 226.9 214 58.9
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.6e-57 226.9 217 60.8
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 2.1e-57 226.5 217 60.4
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 2.8e-57 226.1 214 58.4
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 2.8e-57 226.1 158 74.1
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 6.1e-57 224.9 205 60.0
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 8.0e-57 224.6 213 61.0
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.0e-56 224.2 206 58.7
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.4e-56 223.8 142 78.2
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 2.3e-56 223.0 143 76.9
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 3.1e-56 222.6 212 60.4
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 4.0e-56 222.2 209 59.8
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 6.8e-56 221.5 212 59.0
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 6.8e-56 221.5 211 58.8
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 8.9e-56 221.1 150 75.3
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 1.5e-55 220.3 173 68.2
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.0e-55 219.9 173 68.2
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 2.0e-55 219.9 212 58.5
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 2.0e-55 219.9 205 57.1
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 2.6e-55 219.5 140 78.6
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 3.4e-55 219.2 132 82.6
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 3.4e-55 219.2 132 82.6
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 3.4e-55 219.2 217 58.1
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 3.4e-55 219.2 222 59.0
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 3.4e-55 219.2 205 60.0
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 7.5e-55 218.0 151 73.5
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 1.3e-54 217.2 233 57.1
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 1.3e-54 217.2 137 78.1
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 1.7e-54 216.9 135 79.3
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 2.2e-54 216.5 142 77.5
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 2.2e-54 216.5 207 58.5
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.9e-54 216.1 232 55.6
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 2.9e-54 216.1 212 58.0
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.9e-54 215.3 233 54.9
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 6.4e-54 214.9 150 72.7
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 8.3e-54 214.5 130 82.3
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.1e-53 214.2 219 54.3
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.1e-53 214.2 218 56.0
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.9e-53 213.4 218 56.4
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 3.2e-53 212.6 144 75.0
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 4.1e-53 212.2 202 59.9
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 4.1e-53 212.2 215 55.8
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 4.1e-53 212.2 150 71.3
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 4.1e-53 212.2 226 55.8
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.4e-53 211.8 138 76.1
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 9.2e-53 211.1 129 82.9
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 9.2e-53 211.1 219 54.3
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 9.2e-53 211.1 209 58.9
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 6.0e-52 208.4 149 75.2
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.0e-51 206.1 246 51.6
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 1.9e-50 203.4 191 57.6
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 7.3e-50 201.4 188 58.0
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.2e-49 200.7 262 49.2
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 1.6e-49 200.3 226 54.4
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 2.8e-49 199.5 211 57.3
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 2.8e-49 199.5 148 68.2
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 1.1e-48 197.6 150 68.7
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 1.8e-48 196.8 205 54.6
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.8e-48 196.8 188 58.0
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 2.3e-48 196.4 175 58.3
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.3e-48 196.4 199 57.8
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 3.1e-48 196.1 139 69.8
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 5.2e-48 195.3 119 78.2
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 6.8e-48 194.9 167 62.9
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.5e-47 193.7 143 71.3
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.4e-47 192.2 127 74.0
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 9.8e-47 191.0 142 66.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.7e-46 190.3 141 68.1
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 8.3e-46 188.0 201 53.7
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 1.4e-45 187.2 217 52.5
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.9e-45 186.8 286 42.7
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 2.4e-45 186.4 128 71.9
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 4.1e-45 185.7 208 52.9
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 1.6e-44 183.7 157 65.0
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 7.8e-44 181.4 208 52.4
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 1.7e-43 180.3 151 58.9
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 3.0e-43 179.5 151 61.6
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.6e-43 177.9 130 64.6
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 3.3e-42 176.0 209 51.2
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 3.6e-41 172.6 223 49.3
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 5.2e-40 168.7 135 63.0
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 6.8e-40 168.3 200 52.5
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 2.0e-39 166.8 174 54.0
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.0e-39 166.8 144 60.4
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.6e-39 166.4 178 53.9
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 7.5e-39 164.9 136 65.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.9e-38 162.2 133 61.7
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 7.1e-37 158.3 165 54.5
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 9.2e-37 157.9 142 58.5
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.6e-36 157.1 136 62.5
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 4.6e-36 155.6 129 59.7
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 1.3e-35 154.1 177 50.8
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.3e-35 154.1 190 50.0
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 5.1e-35 152.1 102 76.5
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 6.6e-35 151.8 134 56.0
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 8.6e-35 151.4 165 52.1
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.5e-34 149.8 139 61.9
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 4.3e-34 149.1 178 48.9
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.6e-33 146.0 92 77.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.7e-30 137.1 103 68.0
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.8e-30 136.0 87 77.0
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 3.9e-27 125.9 194 42.3
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 2.1e-25 120.2 131 48.9
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 3.8e-22 109.4 138 44.9
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 3.3e-18 96.3 167 34.7
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 6.2e-17 92.0 61 77.0
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.4e-16 90.9 113 42.5
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 5.8e-15 85.5 87 54.0
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 2.4e-13 80.1 64 64.1
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 9.6e-10 68.2 39 82.1
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 2.6e-07 60.1 40 70.0


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