Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.7e-199 698.0 340 100.0
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 5.5e-195 684.1 343 97.7
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 1.2e-194 682.9 343 97.7
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.5e-187 658.7 321 99.7
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.6e-186 656.0 340 94.7
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.3e-185 652.1 340 94.4
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 1.7e-183 646.0 340 92.9
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 5.1e-177 624.4 340 89.4
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.7e-175 619.4 340 88.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 4.5e-173 611.3 340 87.9
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.9e-171 605.9 340 86.5
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.0e-161 571.6 341 81.8
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.0e-156 554.7 338 78.1
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 6.5e-156 554.3 337 78.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.5e-155 553.1 338 78.4
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.6e-154 549.7 338 77.5
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.1e-154 549.3 338 76.3
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.1e-154 549.3 339 78.5
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.1e-154 549.3 338 78.1
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 6.1e-154 547.7 338 76.9
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 6.1e-154 547.7 338 77.8
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 8.0e-154 547.4 338 77.2
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 8.0e-154 547.4 338 76.9
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 8.0e-154 547.4 338 77.5
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.4e-153 546.6 338 77.5
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.3e-153 545.8 337 78.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.3e-153 545.8 337 78.0
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 5.2e-153 544.7 338 77.2
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 5.2e-153 544.7 337 76.0
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 5.2e-153 544.7 338 76.6
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 2.0e-152 542.7 339 76.7
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 5.7e-152 541.2 338 76.6
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 5.7e-152 541.2 338 75.4
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.3e-151 540.0 340 75.3
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 4.8e-151 538.1 338 74.6
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 6.3e-151 537.7 333 76.6
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 8.3e-151 537.3 338 76.0
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 8.3e-151 537.3 338 76.0
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.4e-150 536.6 338 76.0
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 9.1e-150 533.9 338 76.0
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.2e-149 533.5 338 74.6
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 3.5e-149 531.9 305 80.7
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.0e-148 530.4 338 75.1
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 2.9e-148 528.9 338 75.1
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 3.8e-148 528.5 332 76.2
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 6.6e-148 527.7 340 72.4
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.9e-147 526.2 332 73.8
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.5e-147 525.8 339 73.5
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 4.2e-147 525.0 339 73.2
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 9.5e-147 523.9 332 74.4
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 1.2e-146 523.5 338 73.1
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.6e-146 523.1 338 73.1
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.1e-146 522.7 339 73.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.1e-146 522.7 338 73.7
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.1e-146 521.2 329 74.8
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 6.1e-146 521.2 332 73.5
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 1.8e-145 519.6 338 73.4
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 2.3e-145 519.2 338 73.4
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.0e-145 518.5 332 73.2
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 8.9e-145 517.3 335 73.7
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.5e-144 516.5 346 72.8
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 3.4e-144 515.4 338 73.7
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 7.5e-144 514.2 332 72.6
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 2.2e-143 512.7 338 71.9
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 3.7e-143 511.9 351 72.4
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 3.7e-143 511.9 337 70.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 4.5e-141 505.0 338 71.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 4.5e-141 505.0 338 70.1
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.9e-140 502.3 269 91.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 5.6e-139 498.0 340 70.6
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.3e-139 497.7 333 72.1
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.3e-139 497.7 333 72.4
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 7.3e-139 497.7 333 71.5
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 1.2e-138 496.9 297 75.8
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.1e-138 496.1 335 72.2
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 2.8e-138 495.7 268 90.3
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.1e-138 494.6 333 70.0
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 1.4e-137 493.4 338 69.8
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 8.3e-135 484.2 317 72.6
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 1.1e-134 483.8 317 72.9
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.2e-133 480.3 317 72.2
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 7.3e-131 471.1 330 67.9
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 9.5e-131 470.7 301 73.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.1e-130 469.5 335 66.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 4.7e-130 468.4 336 67.0
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 8.0e-130 467.6 338 63.6
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 7.5e-128 461.1 338 66.6
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.9e-127 459.1 338 65.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 7.3e-123 444.5 270 80.7
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 3.6e-122 442.2 338 65.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.4e-118 430.3 337 60.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.4e-118 429.5 337 60.2
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 4.1e-118 428.7 268 75.4
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 3.6e-114 415.6 321 62.6
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 4.7e-114 415.2 271 72.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 4.0e-113 412.1 333 61.9
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.9e-111 406.0 238 78.6
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.9e-111 406.0 324 59.6
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.4e-110 402.9 338 56.2
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 6.0e-109 398.3 338 59.2
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.8e-105 386.7 269 68.8
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 7.6e-104 381.3 332 55.1
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 1.9e-102 376.7 324 54.9
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 7.4e-91 338.2 233 72.1
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.7e-85 319.7 213 73.2
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 3.3e-83 312.8 327 49.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 5.3e-81 305.4 163 81.6
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 4.1e-57 226.1 145 77.2
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.7e-50 204.1 112 78.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.8e-49 200.7 147 71.4
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 7.7e-48 195.3 138 61.6
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.4e-44 184.5 287 37.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.5e-43 181.0 327 36.1
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 2.4e-33 147.1 323 31.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.5e-30 137.1 80 75.0
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.2e-29 134.8 109 55.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 8.3e-26 122.1 124 56.5
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 3.2e-25 120.2 90 70.0
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.0e-23 113.6 68 67.6
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 2.5e-22 110.5 65 75.4
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 4.7e-21 106.3 147 44.9
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 7.8e-16 89.0 71 62.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 3.6e-13 80.1 60 63.3
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 5.4e-09 66.2 36 77.8
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.6e-08 63.2 40 65.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 6.6e-07 59.3 74 47.3


User provided reference genes

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