Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.5e-223 779.2 420 100.0
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.5e-223 779.2 420 100.0
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 1.4e-221 772.7 420 99.0
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 3.6e-204 714.9 421 89.5
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.2e-202 709.9 421 88.8
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 4.4e-194 681.4 413 89.8
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 4.2e-189 664.8 419 84.2
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 2.8e-172 609.0 419 75.4
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 3.4e-170 602.1 418 73.7
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 3.1e-163 578.9 428 71.5
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 4.0e-163 578.6 421 71.5
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 2.0e-162 576.2 428 71.3
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 1.7e-142 510.0 422 64.2
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 7.3e-141 504.6 423 61.7
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 1.3e-126 457.2 418 56.7
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 3.3e-125 452.6 416 56.5
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 6.3e-116 421.8 416 52.9
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.4e-115 420.6 417 52.5
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 2.4e-115 419.9 416 53.4
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.0e-115 417.9 414 51.4
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 4.5e-114 415.6 417 53.0
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 1.3e-113 414.1 417 52.0
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.7e-113 413.7 417 52.8
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 1.7e-113 413.7 417 51.6
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 5.0e-113 412.1 423 51.1
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-112 411.0 417 52.0
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.1e-112 411.0 417 52.5
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.4e-112 410.6 417 52.5
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 1.9e-112 410.2 416 52.6
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 5.5e-112 408.7 419 50.8
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 1.2e-111 407.5 417 50.8
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 3.6e-111 406.0 416 52.4
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.0e-110 404.4 423 50.1
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.3e-110 404.1 418 50.7
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.3e-110 404.1 416 50.0
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 6.7e-110 401.7 416 51.2
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.5e-109 400.6 423 50.8
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 4.3e-109 399.1 423 50.8
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 1.3e-108 397.5 416 51.4
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 2.8e-108 396.4 423 50.8
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 6.3e-108 395.2 418 50.0
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 3.1e-107 392.9 416 49.3
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 4.1e-107 392.5 417 47.0
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.0e-106 390.2 416 48.8
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 3.4e-106 389.4 403 51.6
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 3.4e-106 389.4 417 50.4
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.3e-105 387.5 417 47.7
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 1.3e-105 387.5 416 48.6
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.3e-105 387.5 416 49.3
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.2e-105 386.7 416 47.4
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.9e-105 386.3 416 47.6
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 3.8e-105 386.0 425 47.3
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 1.1e-104 384.4 376 54.0
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.9e-104 383.6 417 47.2
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.5e-104 383.3 417 47.2
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 3.2e-104 382.9 418 46.7
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 3.2e-104 382.9 422 46.0
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 5.5e-104 382.1 416 48.3
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 4.7e-103 379.0 416 46.6
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 4.7e-103 379.0 422 45.7
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 7.9e-103 378.3 418 46.2
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.4e-102 377.5 416 46.6
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.5e-101 374.0 417 46.0
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 2.6e-101 373.2 417 46.5
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 7.4e-101 371.7 424 45.8
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 3.7e-100 369.4 422 45.0
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 8.2e-100 368.2 415 49.6
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 8.2e-100 368.2 419 43.9
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 3.1e-99 366.3 415 46.5
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 6.9e-99 365.2 402 46.8
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 2.0e-98 363.6 418 45.9
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 8.5e-97 358.2 417 46.5
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 1.4e-96 357.5 416 45.4
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 3.2e-96 356.3 417 46.0
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.2e-95 354.4 414 45.2
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.5e-93 347.4 415 45.3
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 2.0e-93 347.1 416 43.5
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 3.7e-92 342.8 412 43.9
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.2e-90 337.8 387 45.2
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 7.7e-90 335.1 417 42.4
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 3.8e-89 332.8 424 45.0
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 7.2e-88 328.6 417 44.8
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 9.4e-88 328.2 424 44.6
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 9.4e-88 328.2 410 41.7
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 8.0e-87 325.1 416 39.4
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 8.0e-87 325.1 421 39.4
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 1.8e-86 323.9 423 42.6
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.8e-86 323.9 416 39.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 4.0e-86 322.8 416 40.6
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.5e-85 320.9 428 42.8
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 9.7e-85 318.2 415 41.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 2.2e-84 317.0 412 42.0
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 3.7e-84 316.2 420 41.2
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 5.3e-83 312.4 416 39.7
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.2e-82 311.2 419 40.3
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 6.5e-81 305.4 417 40.5
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 2.5e-80 303.5 418 39.2
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 6.1e-79 298.9 415 39.5
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 8.0e-79 298.5 419 39.9
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.8e-78 297.4 421 38.2
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 5.7e-77 292.4 250 57.2
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 1.3e-76 291.2 417 39.3
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 9.1e-75 285.0 251 55.4
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.9e-72 277.3 416 38.0
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 3.3e-72 276.6 357 43.7
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.1e-71 273.9 416 37.7
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 6.1e-71 272.3 413 39.0
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 2.2e-68 263.8 418 44.3
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 5.4e-67 259.2 337 43.3
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.2e-66 258.1 335 43.9
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 5.9e-66 255.8 402 37.1
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 2.7e-58 230.3 176 62.5
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 2.3e-57 227.3 252 46.4
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 8.3e-52 208.8 444 31.3
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 2.8e-47 193.7 294 43.5
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.8e-47 193.7 223 43.0
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 1.6e-39 167.9 226 38.9
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 1.4e-38 164.9 212 41.0
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 6.9e-30 136.0 367 27.5
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 2.4e-27 127.5 172 44.8
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 3.6e-23 113.6 259 31.3
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 6.4e-20 102.8 273 28.6
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 2.1e-18 97.8 176 37.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.6e-15 88.2 208 33.2
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 2.1e-15 87.8 136 35.3
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.5e-13 81.6 388 22.2
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 1.5e-13 81.6 388 22.2
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 3.2e-11 73.9 241 26.6
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 7.1e-11 72.8 365 23.8
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 6.7e-09 66.2 268 24.6


User provided reference genes

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