Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t30127H Brassica oleracea HOM05D000088 ORTHO05D043080 2.9e-16 87.4 44 100.0
C05p13930 Brassica napus HOM05D003219 ORTHO05D024530 5.4e-10 66.6 33 100.0
BcaB03g16535 Brassica carinata HOM05D000088 ORTHO05D000933 1.2e-09 65.5 33 97.0
BcaC06g36300 Brassica carinata HOM05D000088 ORTHO05D000933 4.5e-09 63.5 33 93.9
A07p03310 Brassica napus HOM05D000088 ORTHO05D000933 4.5e-09 63.5 33 93.9
C07p05610 Brassica napus HOM05D000088 ORTHO05D000933 4.5e-09 63.5 33 93.9
BraA07t28131Z Brassica rapa HOM05D000088 ORTHO05D000933 4.5e-09 63.5 33 93.9
BolC7t40960H Brassica oleracea HOM05D000088 ORTHO05D000933 5.9e-09 63.2 33 90.9
BcaB07g31710 Brassica carinata HOM05D000088 ORTHO05D000933 2.2e-08 61.2 33 90.9
A09p11510 Brassica napus HOM05D000088 ORTHO05D000933 2.2e-08 61.2 33 90.9
BraA09t36791Z Brassica rapa HOM05D000088 ORTHO05D000933 2.2e-08 61.2 33 90.9
BcaB08g34752 Brassica carinata HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
BcaC01g02898 Brassica carinata HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
A06p33700 Brassica napus HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
C03p58610 Brassica napus HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
BolC3t18122H Brassica oleracea HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
BraA06t26304Z Brassica rapa HOM05D000088 ORTHO05D000933 6.5e-08 59.7 33 90.9
Sp3g31090 Schrenkiella parvula HOM05D000088 ORTHO05D000933 2.5e-07 57.8 33 87.9
BcaC04g22951 Brassica carinata HOM05D000088 ORTHO05D000933 5.5e-07 56.6 33 84.8
C09p13530 Brassica napus HOM05D000088 ORTHO05D000933 5.5e-07 56.6 33 84.8
BolC9t54244H Brassica oleracea HOM05D000088 ORTHO05D000933 5.5e-07 56.6 33 84.8
AT2G17700 Arabidopsis thaliana HOM05D000088 ORTHO05D000933 9.4e-07 55.8 29 93.1
Carub.0003s3180 Capsella rubella HOM05D000088 ORTHO05D000933 9.4e-07 55.8 29 93.1
CARHR107980 Cardamine hirsuta HOM05D000088 ORTHO05D043080 9.4e-07 55.8 29 93.1
AL3G50690 Arabidopsis lyrata HOM05D000088 ORTHO05D000933 2.1e-06 54.7 29 89.7
Thhalv10022635m.g Eutrema salsugineum HOM05D000088 ORTHO05D000933 4.7e-06 53.5 30 86.7


User provided reference genes

Program Settings