Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p11780 Brassica napus HOM05D005456 ORTHO05D006805 8.4e-37 156.4 72 100.0
BolC5t29924H Brassica oleracea HOM05D005456 ORTHO05D006805 8.4e-37 156.4 72 100.0
BcaB08g34359 Brassica carinata HOM05D005456 ORTHO05D006805 2.6e-22 108.2 90 61.1
BolC8t52161H Brassica oleracea HOM05D005456 ORTHO05D006805 2.6e-22 108.2 90 62.2
Sp1g12390 Schrenkiella parvula HOM05D005456 ORTHO05D006805 4.5e-22 107.5 90 61.1
Carub.0001s1372 Capsella rubella HOM05D005456 ORTHO05D006805 5.8e-22 107.1 90 61.1
AL1G25870 Arabidopsis lyrata HOM05D005456 ORTHO05D006805 7.6e-22 106.7 90 60.0
C08p46110 Brassica napus HOM05D005456 ORTHO05D006805 1.0e-21 106.3 90 60.0
Thhalv10007614m.g Eutrema salsugineum HOM05D005456 ORTHO05D006805 2.9e-21 104.8 90 60.0
A09p62550 Brassica napus HOM05D005456 ORTHO05D006805 5.0e-21 104.0 90 60.0
BraA09t41618Z Brassica rapa HOM05D005456 ORTHO05D006805 5.0e-21 104.0 90 60.0
CARHR014400 Cardamine hirsuta HOM05D005456 ORTHO05D006805 1.1e-20 102.8 90 58.9
Aa31LG1G1000 Aethionema arabicum HOM05D005456 ORTHO05D006805 1.4e-20 102.4 90 57.8
AT1G14030 Arabidopsis thaliana HOM05D005456 ORTHO05D006805 1.4e-20 102.4 90 57.8
BcaC05g25299 Brassica carinata HOM05D005456 ORTHO05D006805 2.5e-20 101.7 56 83.9
COL.COLO4_27983 Corchorus olitorius HOM05D005456 ORTHO05D006805 4.6e-19 97.4 52 80.8
SGA_v2.0_scaffold455G51903 Striga asiatica HOM05D005456 ORTHO05D006805 4.6e-19 97.4 60 71.7
THA.LOC104801808 Tarenaya hassleriana HOM05D005456 ORTHO05D006805 7.9e-19 96.7 53 79.2
Peaxi162Scf00222g00327 Petunia axillaris HOM05D005456 ORTHO05D006805 1.8e-18 95.5 52 78.8
Duzib251G0039 Durio zibethinus HOM05D005456 ORTHO05D006805 2.3e-18 95.1 89 52.8
CAN.G964.8 Capsicum annuum HOM05D005456 ORTHO05D006805 3.0e-18 94.7 89 52.8
Cpa.g.sc991.1 Carica papaya HOM05D005456 ORTHO05D006805 6.7e-18 93.6 53 79.2
Nitab4.5_0011915g0020 Nicotiana tabacum HOM05D005456 ORTHO05D006805 6.7e-18 93.6 89 51.7
Sopen05g007900 Solanum pennellii HOM05D005456 ORTHO05D006805 6.7e-18 93.6 89 51.7
Ciclev10031325m.g Citrus clementina HOM05D005456 ORTHO05D006805 8.7e-18 93.2 52 78.8
Nitab4.5_0000391g0340 Nicotiana tabacum HOM05D005456 ORTHO05D006805 8.7e-18 93.2 89 51.7
GSVIVG01003217001 Vitis vinifera HOM05D005456 ORTHO05D006805 8.7e-18 93.2 52 76.9
Gohir.A03G102200 Gossypium hirsutum HOM05D005456 ORTHO05D006805 1.1e-17 92.8 51 78.4
Gorai.005G142600 Gossypium raimondii HOM05D005456 ORTHO05D006805 1.1e-17 92.8 88 52.3
Thecc.02G340400 Theobroma cacao HOM05D005456 ORTHO05D006805 1.5e-17 92.4 89 52.8
Solyc05g013160.4 Solanum lycopersicum HOM05D005456 ORTHO05D006805 1.9e-17 92.0 52 75.0
PGSC0003DMG400028348 Solanum tuberosum HOM05D005456 ORTHO05D006805 1.9e-17 92.0 89 50.6
Eucgr.G02480 Eucalyptus grandis HOM05D005456 ORTHO05D006805 2.5e-17 91.7 89 50.6
MBI02_g14233_MAGBIO Magnolia biondii HOM05D005456 ORTHO05D006805 3.3e-17 91.3 89 48.3
Potri.008G090500 Populus trichocarpa HOM05D005456 ORTHO05D006805 4.3e-17 90.9 51 80.4
Gohir.D02G127000 Gossypium hirsutum HOM05D005456 ORTHO05D006805 5.7e-17 90.5 88 51.1
Atru.chr11.1728 Acer truncatum HOM05D005456 ORTHO05D006805 9.7e-17 89.7 89 52.8
Haze_11965 Corylus avellana HOM05D005456 ORTHO05D006805 9.7e-17 89.7 91 50.5
Oeu021071.2 Olea europaea HOM05D005456 ORTHO05D006805 9.7e-17 89.7 89 49.4
Sc04g0007920 Simmondsia chinensis HOM05D005456 ORTHO05D006805 9.7e-17 89.7 89 50.6
Cfa008936 Carpinus fangiana HOM05D005456 ORTHO05D006805 2.2e-16 88.6 64 64.1
AUR62032826 Chenopodium quinoa HOM05D005456 ORTHO05D006805 2.2e-16 88.6 89 49.4
TAR622G0968 Trochodendron aralioides HOM05D005456 ORTHO05D006805 2.2e-16 88.6 52 75.0
Hund25214 Selenicereus undatus HOM05D005456 ORTHO05D006805 2.8e-16 88.2 52 69.2
Actinidia33219 Actinidia chinensis HOM05D005456 ORTHO05D006805 3.7e-16 87.8 89 49.4
Cc11_g12670 Coffea canephora HOM05D005456 ORTHO05D006805 3.7e-16 87.8 89 47.2
Ah.03g134770 Amaranthus hybridus HOM05D005456 ORTHO05D006805 4.8e-16 87.4 86 50.0
ClCG09G021880 Citrullus lanatus HOM05D005456 ORTHO05D006805 4.8e-16 87.4 91 45.1
MELO3C008524.2 Cucumis melo HOM05D005456 ORTHO05D006805 4.8e-16 87.4 54 66.7
CsaV3_2G010860 Cucumis sativus L. HOM05D005456 ORTHO05D006805 6.3e-16 87.0 54 66.7
Migut.L01253 Erythranthe guttata HOM05D005456 ORTHO05D006805 6.3e-16 87.0 60 63.3
QL03p069503 Quercus lobata HOM05D005456 ORTHO05D006805 6.3e-16 87.0 91 48.4
FvH4_4g30820 Fragaria vesca HOM05D005456 ORTHO05D006805 8.2e-16 86.7 91 47.3
FAN12G1233 Fragaria x ananassa HOM05D005456 ORTHO05D006805 8.2e-16 86.7 91 47.3
Hma1.2p1_0354F.1_g133890 Hydrangea macrophylla HOM05D005456 ORTHO05D006805 8.2e-16 86.7 89 50.6
Prupe.1G278900 Prunus persica HOM05D005456 ORTHO05D006805 8.2e-16 86.7 54 72.2
CiPaw.05G130300 Carya illinoinensis HOM05D005456 ORTHO05D006805 1.1e-15 86.3 48 77.1
AUR62005833 Chenopodium quinoa HOM05D005456 ORTHO05D006805 1.1e-15 86.3 60 60.0
FAN07G2817 Fragaria x ananassa HOM05D005456 ORTHO05D006805 1.1e-15 86.3 91 48.4
FAN17G1535 Fragaria x ananassa HOM05D005456 ORTHO05D006805 1.1e-15 86.3 91 47.3
Sabra08G0067900 Salix brachista HOM05D005456 ORTHO05D006805 1.1e-15 86.3 55 72.7
Lalb_Chr16g0385691 Lupinus albus HOM05D005456 ORTHO05D006805 1.8e-15 85.5 54 68.5
MD16G1067900 Malus domestica HOM05D005456 ORTHO05D006805 1.8e-15 85.5 54 70.4
FAN22G2029 Fragaria x ananassa HOM05D005456 ORTHO05D006805 2.4e-15 85.1 91 47.3
Glyma.07G228300 Glycine max HOM05D005456 ORTHO05D006805 2.4e-15 85.1 54 68.5
Glyma.20G031600 Glycine max HOM05D005456 ORTHO05D006805 2.4e-15 85.1 54 68.5
PSO063G1835 Papaver somniferum HOM05D005456 ORTHO05D006805 2.4e-15 85.1 60 58.3
PSO063G4701 Papaver somniferum HOM05D005456 ORTHO05D006805 2.4e-15 85.1 60 58.3
VMungo0251G2245 Vigna mungo HOM05D005456 ORTHO05D006805 3.1e-15 84.7 54 66.7
RcHm_v2.0_Chr4g0439211 Rosa chinensis HOM05D005456 ORTHO05D006805 5.3e-15 84.0 54 66.7
TWI79G0373 Tripterygium wilfordii HOM05D005456 ORTHO05D006805 5.3e-15 84.0 48 70.8
TPR.G34023 Trifolium pratense HOM05D005456 ORTHO05D006805 6.9e-15 83.6 54 63.0
EL10Ac6g13252 Beta vulgaris HOM05D005456 ORTHO05D006805 9.0e-15 83.2 49 69.4
Lalb_Chr05g0220241 Lupinus albus HOM05D005456 ORTHO05D006805 9.0e-15 83.2 54 66.7
Rhsim12G0132700 Rhododendron simsii HOM05D005456 ORTHO05D006805 1.2e-14 82.8 92 45.7
ATR0564G531 Amborella trichopoda HOM05D005456 ORTHO05D006805 2.0e-14 82.0 53 64.2
arahy.Tifrunner.gnm1.ann1.HIV449 Arachis hypogaea HOM05D005456 ORTHO05D006805 2.0e-14 82.0 54 63.0
arahy.Tifrunner.gnm1.ann1.YEC905 Arachis hypogaea HOM05D005456 ORTHO05D006805 2.0e-14 82.0 54 63.0
vmacro16348 Vaccinium macrocarpon HOM05D005456 ORTHO05D006805 2.0e-14 82.0 52 67.3
Manes.01G033300 Manihot esculenta HOM05D005456 ORTHO05D006805 2.6e-14 81.6 51 66.7
Aqoxy3G03473 Aquilegia oxysepala HOM05D005456 ORTHO05D006805 3.4e-14 81.3 50 70.0
DCAR_030997 Daucus carota HOM05D005456 ORTHO05D006805 4.5e-14 80.9 52 61.5
Hma1.2p1_0354F.1_g133880 Hydrangea macrophylla HOM05D005456 ORTHO05D006805 4.5e-14 80.9 57 63.2
HPP92_011001 Vanilla planifolia HOM05D005456 ORTHO05D006805 4.5e-14 80.9 51 62.7
Ah.02g129440 Amaranthus hybridus HOM05D005456 ORTHO05D006805 5.9e-14 80.5 89 43.8
CSS0014292 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 5.9e-14 80.5 51 64.7
CSS0028557 Camellia sinensis var. sinensis HOM05D005456 ORTHO05D006805 5.9e-14 80.5 51 64.7
Phvul.002G169400 Phaseolus vulgaris HOM05D005456 ORTHO05D006805 5.9e-14 80.5 48 68.8
unitig_22.g6505 Utricularia gibba HOM05D005456 ORTHO05D006805 5.9e-14 80.5 89 44.9
Sed0000456 Sechium edule HOM05D005456 ORTHO05D006805 7.7e-14 80.1 88 43.2
HanXRQChr15g0476951 Helianthus annuus HOM05D005456 ORTHO05D006805 1.0e-13 79.7 52 63.5
PGR119G2207 Punica granatum HOM05D005456 ORTHO05D006805 1.0e-13 79.7 62 54.8
PGSC0003DMG400028394 Solanum tuberosum HOM05D005456 ORTHO05D006805 1.0e-13 79.7 62 59.7
Ca_08719_v3 Cicer arietinum L. HOM05D005456 ORTHO05D006805 1.7e-13 79.0 54 61.1
CAN.G964.12 Capsicum annuum HOM05D005456 ORTHO05D006805 2.2e-13 78.6 52 61.5
Lj4g0024233 Lotus japonicus HOM05D005456 ORTHO05D006805 2.2e-13 78.6 51 64.7
Medtr4g082305 Medicago truncatula HOM05D005456 ORTHO05D006805 2.2e-13 78.6 50 62.0
CANSAT64G0403 Cannabis sativa HOM05D005456 ORTHO05D006805 5.0e-13 77.4 51 66.7
CDE07G0572 Ceratophyllum demersum HOM05D005456 ORTHO05D006805 5.0e-13 77.4 88 44.3
Os09g0411650 Oryza sativa ssp. japonica HOM05D005456 ORTHO05D006805 5.0e-13 77.4 86 43.0
Atru.chr11.1727 Acer truncatum HOM05D005456 ORTHO05D006805 6.5e-13 77.0 55 61.8
Lsat_1_v5_gn_3_51901 Lactuca sativa HOM05D005456 ORTHO05D006805 6.5e-13 77.0 48 66.7
Eucgr.B01038 Eucalyptus grandis HOM05D005456 ORTHO05D006805 1.4e-12 75.9 95 40.0
Eucgr.B01051 Eucalyptus grandis HOM05D005456 ORTHO05D006805 1.4e-12 75.9 95 40.0
ECA246G4417 Erigeron canadensis HOM05D005456 ORTHO05D006805 1.9e-12 75.5 48 64.6
Solyc05g013150.4 Solanum lycopersicum HOM05D005456 ORTHO05D006805 1.9e-12 75.5 52 61.5
Sopen05g007890 Solanum pennellii HOM05D005456 ORTHO05D006805 1.9e-12 75.5 52 61.5
Eucgr.B00941 Eucalyptus grandis HOM05D005456 ORTHO05D006805 7.2e-12 73.6 95 38.9
Eucgr.B01036 Eucalyptus grandis HOM05D005456 ORTHO05D006805 9.4e-12 73.2 95 38.9
Eucgr.G02479 Eucalyptus grandis HOM05D005456 ORTHO05D006805 1.2e-11 72.8 57 52.6
Eucgr.J01829 Eucalyptus grandis HOM05D005456 ORTHO05D006805 1.0e-10 69.7 57 50.9
Lj6C784G16 Lonicera japonica HOM05D000508 ORTHO05D006805 2.3e-10 68.6 44 61.4
AagrBONN_evm.TU.Sc2ySwM_228.2416 Anthoceros agrestis HOM05D005456 ORTHO05D006805 3.3e-09 64.7 52 40.4
CBR_g780 Chara braunii HOM05D005456 ORTHO05D006805 9.7e-09 63.2 50 44.0
Mapoly0065s0091 Marchantia polymorpha HOM05D005456 ORTHO05D006805 1.7e-08 62.4 54 42.6
Cpa.g.sc480.3 Carica papaya HOM05D005456 ORTHO05D006805 2.8e-08 61.6 63 47.6
Pp3c3_17260 Physcomitrium patens HOM05D005456 ORTHO05D006805 2.8e-08 61.6 52 44.2
SMO367G0558 Selaginella moellendorffii HOM05D005456 ORTHO05D006805 3.7e-08 61.2 61 36.1
Dinv16684 Davidia involucrata HOM05D005456 ORTHO05D006805 2.0e-06 55.5 37 64.9
Dinv16685 Davidia involucrata HOM05D005456 ORTHO05D006805 3.4e-06 54.7 58 50.0


User provided reference genes

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