Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29659H Brassica oleracea HOM05D007934 ORTHO05D010067 4.3e-122 441.4 234 100.0
C05p09150 Brassica napus HOM05D007934 ORTHO05D010067 3.6e-121 438.3 234 99.1
A06p07590 Brassica napus HOM05D007934 ORTHO05D010067 3.6e-113 411.8 234 92.7
BraA06t23961Z Brassica rapa HOM05D007934 ORTHO05D010067 3.6e-113 411.8 234 92.7
BcaC05g24952 Brassica carinata HOM05D007934 ORTHO05D010067 1.1e-104 383.6 237 85.2
Sp1g09500 Schrenkiella parvula HOM05D007934 ORTHO05D010067 4.4e-103 378.3 237 84.8
Thhalv10009458m.g Eutrema salsugineum HOM05D007934 ORTHO05D010067 1.1e-98 363.6 229 82.5
AT1G10800 Arabidopsis thaliana HOM05D007934 ORTHO05D010067 1.1e-96 357.1 227 81.5
Carub.0001s1035 Capsella rubella HOM05D007934 ORTHO05D010067 3.8e-94 348.6 228 80.3
CARHR011020 Cardamine hirsuta HOM05D007934 ORTHO05D010067 4.1e-93 345.1 227 79.7
THA.LOC104809589 Tarenaya hassleriana HOM05D007934 ORTHO05D010067 1.1e-77 293.9 221 70.6
COL.COLO4_06792 Corchorus olitorius HOM05D007934 ORTHO05D010067 2.9e-54 216.1 221 51.1
Sabra14G0111200 Salix brachista HOM05D007934 ORTHO05D010067 3.8e-54 215.7 230 55.7
QL06p027793 Quercus lobata HOM05D007934 ORTHO05D010067 2.5e-53 213.0 220 52.7
Cfa008702 Carpinus fangiana HOM05D007934 ORTHO05D010067 1.2e-52 210.7 221 53.4
CiPaw.02G060500 Carya illinoinensis HOM05D007934 ORTHO05D010067 1.0e-51 207.6 228 50.0
Manes.13G117300 Manihot esculenta HOM05D007934 ORTHO05D010067 3.9e-51 205.7 226 51.3
Duzib268G0160 Durio zibethinus HOM05D007934 ORTHO05D010067 5.1e-51 205.3 219 49.3
Thecc.04G187000 Theobroma cacao HOM05D007934 ORTHO05D010067 1.1e-50 204.1 221 48.9
CSS0014535 Camellia sinensis var. sinensis HOM05D007934 ORTHO05D010067 1.5e-50 203.8 217 51.2
Solyc09g098115.1 Solanum lycopersicum HOM05D007934 ORTHO05D010067 2.5e-50 203.0 227 45.4
FAN12G0351 Fragaria x ananassa HOM05D007934 ORTHO05D010067 8.2e-49 198.0 227 48.9
FvH4_4g12460 Fragaria vesca HOM05D007934 ORTHO05D010067 1.1e-48 197.6 227 48.9
MD04G1026300 Malus domestica HOM05D007934 ORTHO05D010067 1.1e-48 197.6 229 49.8
Aqoxy2G00204 Aquilegia oxysepala HOM05D007934 ORTHO05D010067 4.1e-48 195.7 219 48.9
FAN17G0103 Fragaria x ananassa HOM05D007934 ORTHO05D010067 6.9e-48 194.9 221 49.8
MBI07_g12253_MAGBIO Magnolia biondii HOM05D007934 ORTHO05D010067 6.9e-48 194.9 221 50.2
Lj1g0008563 Lotus japonicus HOM05D007934 ORTHO05D010067 9.1e-48 194.5 220 48.6
RcHm_v2.0_Chr4g0410771 Rosa chinensis HOM05D007934 ORTHO05D010067 9.1e-48 194.5 224 49.6
TPR.G2903 Trifolium pratense HOM05D000246 ORTHO05D005907 1.5e-47 193.7 223 49.8
DCAR_010060 Daucus carota HOM05D007934 ORTHO05D010067 3.4e-47 192.6 223 50.7
Lsat_1_v5_gn_6_58060 Lactuca sativa HOM05D007934 ORTHO05D010067 5.9e-47 191.8 215 51.2
Medtr7g021860 Medicago truncatula HOM05D007934 ORTHO05D010067 7.7e-47 191.4 220 50.0
Prupe.1G176000 Prunus persica HOM05D007934 ORTHO05D010067 1.0e-46 191.0 227 47.1
Ciclev10033502m.g Citrus clementina HOM05D007934 ORTHO05D010067 2.2e-46 189.9 224 48.7
Prupe.2G050500 Prunus persica HOM05D007934 ORTHO05D010067 8.5e-46 188.0 227 46.7
Glyma.09G276700 Glycine max HOM05D007934 ORTHO05D010067 3.2e-45 186.0 223 47.1
Lalb_Chr10g0092091 Lupinus albus HOM05D007934 ORTHO05D010067 9.4e-45 184.5 227 48.9
Atru.chr2.1662 Acer truncatum HOM05D007934 ORTHO05D010067 1.6e-44 183.7 228 48.7
CANSAT78G1949 Cannabis sativa HOM05D007934 ORTHO05D010067 2.1e-44 183.3 232 43.5
Psat3g187720 Pisum sativum HOM05D007934 ORTHO05D010067 4.6e-44 182.2 221 47.5
Atru.chr2.1676 Acer truncatum HOM05D007934 ORTHO05D010067 5.1e-43 178.7 228 47.8
VMungo1383G3460 Vigna mungo HOM05D007934 ORTHO05D010067 1.1e-42 177.6 216 48.6
Phvul.008G084200 Phaseolus vulgaris HOM05D007934 ORTHO05D010067 1.5e-42 177.2 219 45.7
Sopen09g036060 Solanum pennellii HOM05D007934 ORTHO05D010067 3.3e-42 176.0 196 45.9
PGSC0003DMG400006568 Solanum tuberosum HOM05D007934 ORTHO05D010067 5.7e-42 175.3 185 47.0
MELO3C026115.2 Cucumis melo HOM05D007934 ORTHO05D010067 1.7e-41 173.7 195 47.2
AL1G21730 Arabidopsis lyrata HOM05D007934 ORTHO05D010067 3.7e-41 172.6 108 84.3
FAN07G0267 Fragaria x ananassa HOM05D007934 ORTHO05D010067 3.1e-40 169.5 221 45.7
HanXRQChr11g0341381 Helianthus annuus HOM05D007934 ORTHO05D010067 4.1e-40 169.1 205 48.8
ClCG08G003680 Citrullus lanatus HOM05D007934 ORTHO05D010067 5.3e-40 168.7 217 45.6
Dinv27156 Davidia involucrata HOM05D007934 ORTHO05D010067 5.9e-39 165.2 143 60.8
Gohir.D05G327600 Gossypium hirsutum HOM05D007934 ORTHO05D010067 5.9e-39 165.2 219 44.7
Gorai.009G351500 Gossypium raimondii HOM05D007934 ORTHO05D010067 5.9e-39 165.2 219 44.7
Gohir.A05G327400 Gossypium hirsutum HOM05D007934 ORTHO05D010067 2.9e-38 162.9 217 45.2
PGR142G0659 Punica granatum HOM05D007934 ORTHO05D010067 1.4e-37 160.6 204 45.6
Nn1g08266 Nelumbo nucifera HOM05D007934 ORTHO05D010067 9.4e-37 157.9 164 53.7
Potri.014G147600 Populus trichocarpa HOM05D007934 ORTHO05D010067 1.6e-36 157.1 175 53.7
Eucgr.H00465 Eucalyptus grandis HOM05D007934 ORTHO05D010067 1.8e-35 153.7 164 49.4
PSO170G0593 Papaver somniferum HOM05D007934 ORTHO05D010067 4.1e-32 142.5 175 45.7
Ah.04g149820 Amaranthus hybridus HOM05D007934 ORTHO05D010067 1.2e-31 141.0 172 43.0
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.6e-31 140.6 197 42.6
CAN.G681.52 Capsicum annuum HOM05D007934 ORTHO05D010067 7.5e-26 121.7 119 49.6
Actinidia32959 Actinidia chinensis HOM05D007934 ORTHO05D010067 1.3e-22 110.9 158 44.9
SEGI_13791 Sequoiadendron giganteum HOM05D007934 ORTHO05D010067 6.5e-22 108.6 236 32.2
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 9.8e-18 94.7 102 46.1
Mapoly0034s0074 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.7e-17 92.8 197 32.0
AagrBONN_evm.TU.Sc2ySwM_368.2439 Anthoceros agrestis HOM05D007934 ORTHO05D010067 1.1e-16 91.3 186 31.2
Mapoly0007s0045 Marchantia polymorpha HOM05D007934 ORTHO05D010067 3.2e-13 79.7 192 29.2
Pp3c2_28960 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.2e-13 79.3 201 29.9
Pp3c2_28920 Physcomitrium patens HOM05D007934 ORTHO05D010067 9.5e-13 78.2 197 29.9
TAR636G3543 Trochodendron aralioides HOM05D007934 ORTHO05D010067 1.6e-12 77.4 65 63.1
TAR636G1845 Trochodendron aralioides HOM05D007934 ORTHO05D010067 2.1e-12 77.0 101 45.5
CsaV3_6G003110 Cucumis sativus L. HOM05D007934 ORTHO05D010067 3.6e-12 76.3 98 44.9
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 5.2e-11 72.4 67 52.2
Mapoly0012s0008 Marchantia polymorpha HOM05D007934 ORTHO05D010067 1.5e-10 70.9 153 32.0
Pp3c7_26640 Physcomitrium patens HOM05D007934 ORTHO05D010067 4.4e-10 69.3 139 33.1
SMO356G0271 Selaginella moellendorffii HOM05D007934 ORTHO05D010067 1.7e-09 67.4 86 39.5


User provided reference genes

Program Settings