Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29556H Brassica oleracea HOM05D004775 ORTHO05D005351 5.9e-117 424.1 198 100.0
BcaC05g24832 Brassica carinata HOM05D004775 ORTHO05D005351 8.9e-113 410.2 199 95.5
BolC8t48959H Brassica oleracea HOM05D004775 ORTHO05D005351 3.0e-108 395.2 199 92.5
BcaC07g38533 Brassica carinata HOM05D004775 ORTHO05D005351 1.5e-107 392.9 199 92.0
BraA08t35340Z Brassica rapa HOM05D004775 ORTHO05D005351 1.5e-107 392.9 199 92.0
A08p34290 Brassica napus HOM05D004775 ORTHO05D005351 2.1e-106 389.0 199 90.5
C05p08040 Brassica napus HOM05D004775 ORTHO05D005351 4.7e-106 387.9 183 98.9
CARHR009970 Cardamine hirsuta HOM05D004775 ORTHO05D005351 1.1e-105 386.7 196 91.3
A06p06630 Brassica napus HOM05D004775 ORTHO05D005351 5.2e-105 384.4 183 97.3
BraA06t23877Z Brassica rapa HOM05D004775 ORTHO05D005351 5.2e-105 384.4 183 97.3
AL1G20520 Arabidopsis lyrata HOM05D004775 ORTHO05D005351 8.9e-105 383.6 196 90.8
Carub.0001s0930 Capsella rubella HOM05D004775 ORTHO05D005351 5.8e-104 380.9 197 90.4
AT1G09920 Arabidopsis thaliana HOM05D004775 ORTHO05D005351 3.5e-101 371.7 196 88.8
Thhalv10008829m.g Eutrema salsugineum HOM05D004775 ORTHO05D005351 4.6e-101 371.3 193 90.7
Sp1g08560 Schrenkiella parvula HOM05D004775 ORTHO05D005351 1.7e-100 369.4 192 89.6
C08p13270 Brassica napus HOM05D004775 ORTHO05D005351 1.5e-99 366.3 187 92.5
Aa31LG1G4980 Aethionema arabicum HOM05D000583 ORTHO05D000442 1.2e-93 346.7 194 80.9
THA.LOC104823690 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 5.1e-92 341.3 198 79.3
THA.LOC104816787 Tarenaya hassleriana HOM05D004775 ORTHO05D005351 3.6e-90 335.1 193 78.8
COL.COLO4_35296 Corchorus olitorius HOM05D004775 ORTHO05D005351 7.9e-77 290.8 197 67.5
Gohir.A01G125800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 2.3e-76 289.3 197 66.5
Duzib116G0735 Durio zibethinus HOM05D004775 ORTHO05D005351 6.6e-76 287.7 197 66.0
Thecc.08G074700 Theobroma cacao HOM05D004775 ORTHO05D005351 6.6e-76 287.7 197 67.5
MD15G1389500 Malus domestica HOM05D004775 ORTHO05D005351 2.5e-75 285.8 197 66.0
Gohir.D01G113700 Gossypium hirsutum HOM05D004775 ORTHO05D005351 5.6e-75 284.6 197 65.5
Gohir.D05G220600 Gossypium hirsutum HOM05D004775 ORTHO05D005351 5.6e-75 284.6 195 66.7
Gorai.002G138100 Gossypium raimondii HOM05D004775 ORTHO05D005351 5.6e-75 284.6 197 65.5
Atru.chr13.955 Acer truncatum HOM05D004775 ORTHO05D005351 7.3e-75 284.3 194 67.5
Duzib093G0042 Durio zibethinus HOM05D004775 ORTHO05D005351 1.3e-74 283.5 197 66.5
Duzib041G0637 Durio zibethinus HOM05D004775 ORTHO05D005351 1.6e-74 283.1 217 61.8
Gohir.A05G216900 Gossypium hirsutum HOM05D004775 ORTHO05D005351 2.8e-74 282.3 195 66.2
TWI12G1154 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 8.1e-74 280.8 198 66.2
MELO3C003503.2 Cucumis melo HOM05D004775 ORTHO05D005351 1.4e-73 280.0 204 65.2
QL12p039787 Quercus lobata HOM05D004775 ORTHO05D005351 1.4e-73 280.0 200 65.5
CsaV3_3G048130 Cucumis sativus L. HOM05D004775 ORTHO05D005351 3.1e-73 278.9 204 64.7
TWI56G0975 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 3.1e-73 278.9 201 66.2
Gohir.A06G030500 Gossypium hirsutum HOM05D004775 ORTHO05D005351 6.9e-73 277.7 197 64.0
Prupe.1G538600 Prunus persica HOM05D004775 ORTHO05D005351 1.5e-72 276.6 195 65.1
LjContig00408g0019215 Lotus japonicus HOM05D004775 ORTHO05D005351 2.0e-72 276.2 200 63.0
Potri.002G109800 Populus trichocarpa HOM05D004775 ORTHO05D005351 2.6e-72 275.8 205 64.9
Sed0025083 Sechium edule HOM05D004775 ORTHO05D005351 4.5e-72 275.0 203 64.0
Gorai.010G032800 Gossypium raimondii HOM05D004775 ORTHO05D005351 5.8e-72 274.6 197 63.5
Manes.18G057500 Manihot esculenta HOM05D004775 ORTHO05D005351 7.6e-72 274.2 193 65.8
TWI36G1537 Tripterygium wilfordii HOM05D004775 ORTHO05D005351 9.9e-72 273.9 195 65.6
Ciclev10002525m.g Citrus clementina HOM05D004775 ORTHO05D005351 1.3e-71 273.5 201 64.2
TPR.G27047 Trifolium pratense HOM05D004775 ORTHO05D005351 2.2e-71 272.7 197 61.9
Ca_15537_v3 Cicer arietinum L. HOM05D000583 ORTHO05D000442 2.9e-71 272.3 195 64.1
Sed0023619 Sechium edule HOM05D004775 ORTHO05D005351 4.9e-71 271.6 203 62.6
CiPaw.07G162400 Carya illinoinensis HOM05D004775 ORTHO05D005351 6.4e-71 271.2 195 63.6
Gohir.D06G029800 Gossypium hirsutum HOM05D004775 ORTHO05D005351 6.4e-71 271.2 195 63.6
Lalb_Chr17g0344651 Lupinus albus HOM05D004775 ORTHO05D005351 1.9e-70 269.6 193 61.1
Gorai.009G227600 Gossypium raimondii HOM05D004775 ORTHO05D005351 2.4e-70 269.2 195 65.1
Psat2g064440 Pisum sativum HOM05D004775 ORTHO05D005351 2.4e-70 269.2 202 59.9
Peaxi162Scf00962g00039 Petunia axillaris HOM05D004775 ORTHO05D005351 3.2e-70 268.9 195 63.6
Lalb_Chr11g0064841 Lupinus albus HOM05D004775 ORTHO05D005351 5.5e-70 268.1 194 61.3
MSTRG.932 Avicennia marina HOM05D004775 ORTHO05D005351 7.1e-70 267.7 189 64.0
RcHm_v2.0_Chr7g0233601 Rosa chinensis HOM05D004775 ORTHO05D005351 9.3e-70 267.3 197 61.9
Nitab4.5_0018050g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 1.2e-69 266.9 195 63.1
Migut.C00072 Erythranthe guttata HOM05D004775 ORTHO05D005351 1.6e-69 266.5 192 63.5
Actinidia10268 Actinidia chinensis HOM05D004775 ORTHO05D005351 2.1e-69 266.2 198 63.1
Dinv42587 Davidia involucrata HOM05D004775 ORTHO05D005351 2.1e-69 266.2 197 60.9
Medtr3g111440 Medicago truncatula HOM05D004775 ORTHO05D005351 2.1e-69 266.2 197 62.9
MSTRG.24993 Avicennia marina HOM05D004775 ORTHO05D005351 3.5e-69 265.4 189 63.0
Cc10_g08310 Coffea canephora HOM05D004775 ORTHO05D005351 3.5e-69 265.4 197 62.9
PGR042G0432 Punica granatum HOM05D004775 ORTHO05D005351 3.5e-69 265.4 198 60.6
CAN.G1104.13 Capsicum annuum HOM05D004775 ORTHO05D005351 7.9e-69 264.2 197 60.9
TAR381G0646 Trochodendron aralioides HOM05D004775 ORTHO05D005351 1.0e-68 263.8 195 59.5
CANSAT25G1480 Cannabis sativa HOM05D004775 ORTHO05D005351 1.3e-68 263.5 188 63.8
FAN08G1925 Fragaria x ananassa HOM05D004775 ORTHO05D005351 2.3e-68 262.7 197 59.9
Psat0s3268g0200 Pisum sativum HOM05D004775 ORTHO05D005351 3.0e-68 262.3 197 61.4
FAN18G1173 Fragaria x ananassa HOM05D004775 ORTHO05D005351 3.9e-68 261.9 197 59.9
Glyma.02G216500 Glycine max HOM05D004775 ORTHO05D005351 3.9e-68 261.9 201 59.7
MD08G1206200 Malus domestica HOM05D004775 ORTHO05D005351 3.9e-68 261.9 182 65.9
Nitab4.5_0003184g0020 Nicotiana tabacum HOM05D004775 ORTHO05D005351 3.9e-68 261.9 195 63.1
Glyma.14G183500 Glycine max HOM05D004775 ORTHO05D005351 8.7e-68 260.8 200 59.5
Solyc04g076670.3 Solanum lycopersicum HOM05D004775 ORTHO05D005351 1.1e-67 260.4 193 62.7
Sopen04g030390 Solanum pennellii HOM05D004775 ORTHO05D005351 1.1e-67 260.4 193 62.7
Medtr5g066840 Medicago truncatula HOM05D004775 ORTHO05D005351 3.3e-67 258.8 192 58.9
arahy.Tifrunner.gnm1.ann1.ZY5S91 Arachis hypogaea HOM05D004775 ORTHO05D005351 5.6e-67 258.1 187 64.2
FAN04G2969 Fragaria x ananassa HOM05D004775 ORTHO05D005351 5.6e-67 258.1 197 59.9
Aqoxy6G00652 Aquilegia oxysepala HOM05D004775 ORTHO05D005351 7.4e-67 257.7 197 57.9
Hma1.2p1_0125F.1_g058660 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 1.3e-66 256.9 192 63.0
BcaB03g13545 Brassica carinata HOM05D004775 ORTHO05D005351 1.6e-66 256.5 135 90.4
Cpa.g.sc177.17 Carica papaya HOM05D004775 ORTHO05D005351 1.6e-66 256.5 195 62.6
CAN.G723.7 Capsicum annuum HOM05D004775 ORTHO05D005351 3.7e-66 255.4 193 61.7
unitig_8.g4905 Utricularia gibba HOM05D004775 ORTHO05D005351 8.1e-66 254.2 184 61.4
CSS0014871 Camellia sinensis var. sinensis HOM05D004775 ORTHO05D005351 1.1e-65 253.8 187 62.0
DCAR_020031 Daucus carota HOM05D004775 ORTHO05D005351 1.4e-65 253.4 197 60.4
Oeu038164.1 Olea europaea HOM05D004775 ORTHO05D005351 1.4e-65 253.4 194 58.2
TPR.G12363 Trifolium pratense HOM05D004775 ORTHO05D005351 1.8e-65 253.1 195 58.5
Ca_05476_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 2.4e-65 252.7 191 60.2
Ca_30556_v3 Cicer arietinum L. HOM05D004775 ORTHO05D005351 2.4e-65 252.7 191 60.2
Nn5g29801 Nelumbo nucifera HOM05D004775 ORTHO05D005351 5.3e-65 251.5 193 59.6
Solyc12g088070.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 9.0e-65 250.8 197 57.4
Sopen12g030090 Solanum pennellii HOM05D004775 ORTHO05D005351 5.8e-64 248.1 197 58.4
PSO532G0015 Papaver somniferum HOM05D004775 ORTHO05D005351 2.9e-63 245.7 196 58.7
PSO541G5225 Papaver somniferum HOM05D004775 ORTHO05D005351 2.9e-63 245.7 196 58.2
TAR625G1011 Trochodendron aralioides HOM05D004775 ORTHO05D005351 2.9e-63 245.7 195 55.9
Sc26g0003070 Simmondsia chinensis HOM05D004775 ORTHO05D005351 4.2e-62 241.9 193 56.0
PSO541G4289 Papaver somniferum HOM05D004775 ORTHO05D005351 5.5e-62 241.5 196 57.7
ECA246G4228 Erigeron canadensis HOM05D004775 ORTHO05D005351 7.1e-62 241.1 183 60.7
unitig_578.g16108 Utricularia gibba HOM05D004775 ORTHO05D005351 9.3e-62 240.7 182 64.3
CAN.G1104.12 Capsicum annuum HOM05D004775 ORTHO05D005351 3.9e-60 235.3 193 56.0
Sabra02G0086400 Salix brachista HOM05D004775 ORTHO05D005351 1.9e-59 233.0 262 46.2
HanXRQChr02g0046001 Helianthus annuus HOM05D004775 ORTHO05D005351 3.3e-59 232.3 191 56.0
GSVIVG01009216001 Vitis vinifera HOM05D004775 ORTHO05D005351 4.3e-59 231.9 203 55.2
ECA247G3351 Erigeron canadensis HOM05D004775 ORTHO05D005351 4.8e-58 228.4 189 56.6
Phvul.009G145000 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 1.4e-57 226.9 195 55.4
Lsat_1_v5_gn_6_107340 Lactuca sativa HOM05D004775 ORTHO05D005351 1.2e-56 223.8 179 59.2
Dinv44879 Davidia involucrata HOM05D000583 ORTHO05D000442 2.9e-55 219.2 188 54.8
Glyma.06G092700 Glycine max HOM05D004775 ORTHO05D005351 3.8e-55 218.8 195 53.8
Actinidia19256 Actinidia chinensis HOM05D004775 ORTHO05D005351 5.0e-55 218.4 147 65.3
CDE02G4408 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 5.5e-54 214.9 186 55.9
ATR0800G163 Amborella trichopoda HOM05D004775 ORTHO05D005351 7.2e-54 214.5 132 69.7
vmacro21362 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 9.3e-54 214.2 270 43.3
Zm00001eb017320 Zea mays HOM05D004775 ORTHO05D005351 1.6e-53 213.4 187 54.0
CDE01G0193 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 2.7e-53 212.6 185 54.6
GSVIVG01009218001 Vitis vinifera HOM05D004775 ORTHO05D005351 1.3e-52 210.3 210 51.0
ClCG11G014720 Citrullus lanatus HOM05D004775 ORTHO05D005351 1.8e-52 209.9 160 63.1
Phvul.008G183600 Phaseolus vulgaris HOM05D004775 ORTHO05D005351 2.3e-52 209.5 154 61.0
PGSC0003DMG402002053 Solanum tuberosum HOM05D004775 ORTHO05D005351 1.9e-51 206.5 197 49.7
BraA09t41874Z Brassica rapa HOM05D000348 ORTHO05D000244 1.3e-50 203.8 194 56.2
Nitab4.5_0000354g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 4.8e-50 201.8 172 56.4
Zm00001eb110680 Zea mays HOM05D004775 ORTHO05D005351 1.1e-49 200.7 187 50.3
BcaC07g41856 Brassica carinata HOM05D004775 ORTHO05D005351 2.4e-49 199.5 194 56.2
BolC8t52458H Brassica oleracea HOM05D000348 ORTHO05D000244 2.4e-49 199.5 194 56.2
Solyc12g088060.2 Solanum lycopersicum HOM05D004775 ORTHO05D005351 3.1e-49 199.1 131 62.6
Lsat_1_v5_gn_1_840 Lactuca sativa HOM05D004775 ORTHO05D005351 1.5e-48 196.8 214 47.7
Nitab4.5_0000885g0090 Nicotiana tabacum HOM05D004775 ORTHO05D005351 2.0e-48 196.4 182 54.4
SEGI_14572 Sequoiadendron giganteum HOM05D004775 ORTHO05D005351 2.0e-48 196.4 192 46.9
Eucgr.F00443 Eucalyptus grandis HOM05D004775 ORTHO05D005351 4.5e-48 195.3 198 48.5
Zm00001eb394470 Zea mays HOM05D004775 ORTHO05D005351 1.3e-47 193.7 186 50.0
Os03g0356652 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 9.4e-46 187.6 191 48.2
VMungo1309G0719 Vigna mungo HOM05D004775 ORTHO05D005351 2.7e-45 186.0 179 50.3
EL10Ac1g00475 Beta vulgaris HOM05D004775 ORTHO05D005351 7.9e-45 184.5 190 47.4
unitig_37.g13069 Utricularia gibba HOM05D000316 ORTHO05D005351 3.0e-44 182.6 184 47.3
MBI16_g12296_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 2.0e-43 179.9 152 54.6
HanXRQChr05g0163501 Helianthus annuus HOM05D004775 ORTHO05D005351 1.3e-42 177.2 158 55.1
HanXRQChr10g0277731 Helianthus annuus HOM05D004775 ORTHO05D005351 1.7e-42 176.8 155 55.5
Nn1g05655 Nelumbo nucifera HOM05D004775 ORTHO05D005351 6.3e-42 174.9 108 65.7
Os07g0657500 Oryza sativa ssp. japonica HOM05D004775 ORTHO05D005351 1.8e-41 173.3 182 43.4
Mapoly0004s0283 Marchantia polymorpha HOM05D004775 ORTHO05D005351 2.4e-41 172.9 203 41.9
Hund17253 Selenicereus undatus HOM05D004775 ORTHO05D005351 5.3e-41 171.8 168 48.8
FvH4_5g34100 Fragaria vesca HOM05D004775 ORTHO05D005351 1.2e-40 170.6 137 59.1
VMungo0647G0779 Vigna mungo HOM05D004775 ORTHO05D005351 5.9e-40 168.3 131 61.1
AUR62014379 Chenopodium quinoa HOM05D004775 ORTHO05D005351 2.9e-39 166.0 199 45.2
AUR62019121 Chenopodium quinoa HOM05D004775 ORTHO05D005351 6.5e-39 164.9 199 44.2
Hma1.2p1_0010F.1_g006440 Hydrangea macrophylla HOM05D004775 ORTHO05D005351 1.4e-38 163.7 137 56.9
Haze_22493 Corylus avellana HOM05D004775 ORTHO05D005351 4.2e-38 162.2 185 48.1
Manes.12G122400 Manihot esculenta HOM05D004775 ORTHO05D005351 6.7e-36 154.8 195 37.9
Sopen12g030080 Solanum pennellii HOM05D000583 ORTHO05D000442 7.4e-35 151.4 140 51.4
SGA_v2.0_scaffold74G24544 Striga asiatica HOM05D004775 ORTHO05D005351 3.5e-24 115.9 218 32.6
MBI05_g43456_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 4.0e-20 102.4 87 50.6
MBI10_g33158_MAGBIO Magnolia biondii HOM05D004775 ORTHO05D005351 9.8e-19 97.8 86 51.2
vmacro22764 Vaccinium macrocarpon HOM05D004775 ORTHO05D005351 6.5e-15 85.1 72 52.8
MELO3C018834.2 Cucumis melo HOM05D006348 ORTHO05D008261 8.5e-15 84.7 162 29.6
ClCG02G002100 Citrullus lanatus HOM05D006348 ORTHO05D008261 3.6e-13 79.3 155 29.0
EL10Ac5g11991 Beta vulgaris HOM05D006348 ORTHO05D008261 1.4e-12 77.4 163 28.2
Dinv36973 Davidia involucrata HOM05D004775 ORTHO05D005351 2.3e-12 76.6 149 34.9
SGA_v2.0_scaffold159G37573 Striga asiatica HOM05D006348 ORTHO05D008261 2.6e-11 73.2 154 29.2
CDE07G0871 Ceratophyllum demersum HOM05D004775 ORTHO05D005351 4.4e-11 72.4 57 52.6
Dinv08741 Davidia involucrata HOM05D006348 ORTHO05D008261 5.7e-11 72.0 154 29.2
Nn1g03434 Nelumbo nucifera HOM05D006348 ORTHO05D008261 1.7e-10 70.5 154 27.9
Medtr3g099560 Medicago truncatula HOM05D004775 ORTHO05D005351 1.7e-07 60.5 39 64.1
Glyma.04G091000 Glycine max HOM05D004775 ORTHO05D005351 6.6e-07 58.5 50 60.0


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