Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 2.5e-133 478.8 244 100.0
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 2.5e-133 478.8 244 100.0
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 1.2e-122 443.4 245 94.3
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 1.2e-122 443.4 245 94.3
Sp1g08120 Schrenkiella parvula HOM05D003268 ORTHO05D003719 1.9e-85 319.7 257 70.0
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 7.2e-80 301.2 214 70.6
A09p65470 Brassica napus HOM05D003268 ORTHO05D003719 1.9e-77 293.1 243 64.6
BraA09t41892Z Brassica rapa HOM05D003268 ORTHO05D003719 1.9e-77 293.1 243 64.6
C08p00580 Brassica napus HOM05D003268 ORTHO05D003719 5.7e-77 291.6 215 70.2
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 4.5e-74 282.0 227 68.3
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 3.6e-71 272.3 221 67.4
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 2.3e-70 269.6 247 61.9
A08p34520 Brassica napus HOM05D003268 ORTHO05D003719 3.9e-70 268.9 216 66.2
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 2.6e-69 266.2 215 67.9
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 1.3e-68 263.8 261 59.0
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 4.8e-68 261.9 260 60.8
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 1.8e-67 260.0 228 64.5
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 1.3e-65 253.8 189 71.4
CARHR009490 Cardamine hirsuta HOM05D003268 ORTHO05D003719 6.5e-65 251.5 256 57.4
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 2.3e-62 243.0 196 67.3
BolC8t52481H Brassica oleracea HOM05D003268 ORTHO05D003719 5.2e-62 241.9 153 73.2
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 8.8e-62 241.1 197 68.0
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 2.5e-56 223.0 276 47.8
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.5e-53 213.8 244 51.2
BcaC07g38513 Brassica carinata HOM05D003268 ORTHO05D003719 1.3e-52 210.7 247 53.4
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 4.1e-51 205.7 264 48.9
BcaC07g36965 Brassica carinata HOM05D003268 ORTHO05D003719 2.3e-46 189.9 128 68.0
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 3.5e-42 176.0 186 51.6
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 3.8e-41 172.6 237 45.6
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 5.0e-41 172.2 214 47.7
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 4.2e-40 169.1 192 52.1
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 2.1e-39 166.8 183 49.2
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.8e-38 163.7 189 48.1
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.8e-38 163.7 163 53.4
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.8e-38 163.7 163 53.4
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 3.0e-38 162.9 205 48.3
BcaC07g41877 Brassica carinata HOM05D003268 ORTHO05D003719 2.0e-37 160.2 214 50.9
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 2.0e-34 150.2 240 41.2
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 4.5e-34 149.1 225 40.9
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 1.1e-32 144.4 144 53.5
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 4.3e-32 142.5 166 47.6
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 2.1e-31 140.2 217 41.9
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 2.8e-31 139.8 218 39.0
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 2.8e-31 139.8 175 45.1
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 6.1e-31 138.7 267 37.8
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 1.8e-30 137.1 175 44.6
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 1.8e-30 137.1 221 39.8
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 3.1e-30 136.3 226 43.4
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 1.2e-29 134.4 200 42.5
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 1.2e-29 134.4 210 44.8
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 1.5e-29 134.0 224 42.0
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.5e-29 134.0 224 42.0
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 2.6e-29 133.3 164 50.0
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 4.4e-29 132.5 249 36.5
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.8e-29 131.3 180 42.2
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 2.2e-28 130.2 174 43.7
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 8.3e-28 128.3 189 41.3
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 1.4e-27 127.5 224 39.3
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 1.4e-27 127.5 177 42.4
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 1.9e-27 127.1 199 42.7
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 2.4e-27 126.7 211 41.2
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 3.2e-27 126.3 213 41.3
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 3.2e-27 126.3 189 42.3
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 9.2e-27 124.8 218 42.2
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 9.2e-27 124.8 175 42.3
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 1.2e-26 124.4 268 36.2
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 1.6e-26 124.0 206 39.3
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 2.0e-26 123.6 189 39.7
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 2.0e-26 123.6 196 40.3
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 2.7e-26 123.2 218 39.0
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 3.5e-26 122.9 177 41.8
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 3.5e-26 122.9 182 40.7
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 3.5e-26 122.9 182 40.7
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 3.5e-26 122.9 182 41.2
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 4.6e-26 122.5 179 40.2
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 4.6e-26 122.5 245 36.7
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 4.6e-26 122.5 245 36.7
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 6.0e-26 122.1 184 38.6
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 6.0e-26 122.1 183 39.3
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 1.0e-25 121.3 160 43.1
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 1.0e-25 121.3 184 39.7
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.7e-25 120.6 152 42.1
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 2.3e-25 120.2 180 40.6
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 3.9e-25 119.4 168 38.7
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 5.0e-25 119.0 190 38.9
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 5.0e-25 119.0 202 40.6
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 5.0e-25 119.0 219 37.9
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 5.0e-25 119.0 219 37.9
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.6e-25 118.6 194 39.7
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.1e-24 117.9 221 37.6
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 1.9e-24 117.1 205 39.0
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 1.9e-24 117.1 235 33.6
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 3.3e-24 116.3 199 38.2
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 3.3e-24 116.3 184 38.6
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 4.3e-24 115.9 186 38.7
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 4.3e-24 115.9 186 38.7
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 4.3e-24 115.9 222 36.5
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 4.3e-24 115.9 202 39.1
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 7.3e-24 115.2 171 37.4
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 9.5e-24 114.8 201 38.3
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 9.5e-24 114.8 166 42.8
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.5e-24 114.8 172 39.0
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 1.6e-23 114.0 170 40.0
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 2.1e-23 113.6 186 38.2
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 2.8e-23 113.2 188 41.0
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 2.8e-23 113.2 179 40.8
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 4.7e-23 112.5 186 38.2
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 4.7e-23 112.5 198 38.4
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 8.0e-23 111.7 190 35.8
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 8.0e-23 111.7 167 42.5
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 1.1e-22 111.3 158 39.9
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 1.1e-22 111.3 196 38.8
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 1.8e-22 110.5 174 37.9
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 2.3e-22 110.2 185 38.9
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 3.1e-22 109.8 195 38.5
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 4.0e-22 109.4 172 40.1
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 4.0e-22 109.4 173 38.7
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 6.8e-22 108.6 239 33.1
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 6.8e-22 108.6 174 37.9
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 6.8e-22 108.6 177 39.5
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 8.9e-22 108.2 172 38.4
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 1.2e-21 107.8 164 38.4
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 2.0e-21 107.1 176 40.3
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 2.0e-21 107.1 219 33.8
TWI09G0361 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 2.0e-21 107.1 185 35.7
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 2.6e-21 106.7 196 38.8
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 3.4e-21 106.3 201 34.3
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 5.8e-21 105.5 177 37.9
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 4.9e-20 102.4 187 31.6
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 4.9e-20 102.4 166 39.2
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 4.9e-20 102.4 177 38.4
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 4.9e-20 102.4 178 37.6
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 1.9e-19 100.5 173 37.6
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 1.9e-19 100.5 198 34.8
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 1.9e-19 100.5 188 36.2
Aa31LG1G5600 Aethionema arabicum HOM05D003268 ORTHO05D003719 4.1e-19 99.4 115 46.1
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.2e-18 97.8 160 35.6
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 1.6e-18 97.4 181 33.1
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 2.7e-18 96.7 164 37.8
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 3.5e-18 96.3 159 38.4
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 3.5e-18 96.3 158 34.2
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 6.0e-18 95.5 172 33.1
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 6.0e-18 95.5 169 35.5
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 7.8e-18 95.1 173 36.4
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 7.8e-18 95.1 187 35.8
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 1.7e-17 94.0 164 34.8
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 2.3e-17 93.6 187 36.9
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.3e-17 93.6 169 34.9
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 3.0e-17 93.2 174 33.9
Sp3g15630 Schrenkiella parvula HOM05D003268 ORTHO05D003719 5.1e-17 92.4 190 34.2
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 1.1e-16 91.3 197 32.5
Carub.0003s1718 Capsella rubella HOM05D003268 ORTHO05D003719 1.1e-16 91.3 178 34.3
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.5e-16 90.9 202 33.2
PGSC0003DMG400024495 Solanum tuberosum HOM05D003268 ORTHO05D003719 1.9e-16 90.5 206 30.1
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 5.6e-16 89.0 165 35.8
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 5.6e-16 89.0 165 35.8
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 7.3e-16 88.6 171 35.7
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 7.3e-16 88.6 172 33.1
Sabra08G0150300 Salix brachista HOM05D003268 ORTHO05D003719 9.5e-16 88.2 131 38.2
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 9.5e-16 88.2 161 32.3
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 1.2e-15 87.8 171 34.5
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 1.2e-15 87.8 161 33.5
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 1.2e-15 87.8 131 38.9
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 1.6e-15 87.4 171 35.1
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 1.6e-15 87.4 171 35.1
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 1.6e-15 87.4 171 35.1
Prupe.1G105300 Prunus persica HOM05D003268 ORTHO05D003719 2.1e-15 87.0 224 28.6
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 2.8e-15 86.7 194 33.5
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 4.7e-15 85.9 177 34.5
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 1.8e-14 84.0 172 37.2
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 4.0e-14 82.8 171 32.7
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 4.0e-14 82.8 181 33.7
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 4.0e-14 82.8 162 34.6
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 1.2e-13 81.3 179 33.5
C01p46720 Brassica napus HOM05D003268 ORTHO05D003719 3.4e-13 79.7 152 34.2
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 9.9e-13 78.2 201 28.9
A01p36890 Brassica napus HOM05D003268 ORTHO05D003719 2.2e-12 77.0 172 33.7
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.2e-12 77.0 77 45.5
HanXRQChr07g0197201 Helianthus annuus HOM05D003268 ORTHO05D003719 2.9e-12 76.6 178 29.2
ATR0796G330 Amborella trichopoda HOM05D003268 ORTHO05D003719 3.7e-12 76.3 234 27.4
BraA01t03748Z Brassica rapa HOM05D003268 ORTHO05D003719 6.4e-12 75.5 160 33.8
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 2.4e-11 73.6 155 37.4
unitig_578.g15945 Utricularia gibba HOM05D003268 ORTHO05D003719 2.4e-11 73.6 110 38.2
Os05g0277200 Oryza sativa ssp. japonica HOM05D003268 ORTHO05D003719 2.3e-09 67.0 228 29.4
Aqoxy5G02799 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 1.5e-08 64.3 188 29.3
Dinv24510 Davidia involucrata HOM05D003268 ORTHO05D003719 5.2e-06 55.8 100 40.0


User provided reference genes

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