Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 5.8e-89 330.9 169 100.0
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 4.9e-88 327.8 169 98.2
BraA06t23825Z Brassica rapa HOM05D009911 ORTHO05D009712 5.3e-82 307.8 169 94.7
A06p06120 Brassica napus HOM05D009911 ORTHO05D009712 2.0e-81 305.8 169 94.1
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 2.0e-57 226.1 166 72.9
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 1.0e-56 223.8 169 71.6
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 2.9e-56 222.2 170 71.8
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 2.9e-56 222.2 169 71.0
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 2.9e-56 222.2 170 71.8
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 3.0e-53 212.2 175 67.4
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 4.4e-52 208.4 175 66.3
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 1.1e-50 203.8 175 65.1
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 2.7e-49 199.1 171 64.9
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 7.2e-47 191.0 175 60.6
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 1.4e-42 176.8 175 56.0
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 1.4e-42 176.8 172 56.4
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 1.0e-40 170.6 175 53.7
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 9.8e-36 154.1 175 50.3
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 4.5e-33 145.2 173 45.7
C08p49490 Brassica napus HOM05D009911 ORTHO05D009712 4.3e-31 138.7 174 51.1
BcaC07g41882 Brassica carinata HOM05D009911 ORTHO05D009712 5.8e-28 128.3 174 49.4
BcaC07g41884 Brassica carinata HOM05D009911 ORTHO05D009712 1.1e-21 107.5 108 59.3
BolC5t29495H Brassica oleracea HOM05D009911 ORTHO05D009712 1.3e-16 90.5 88 60.2
A09p65510 Brassica napus HOM05D009911 ORTHO05D009712 1.4e-13 80.5 111 45.9
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 6.4e-11 71.6 162 28.4
BraA09t41896Z Brassica rapa HOM05D009911 ORTHO05D009712 7.1e-10 68.2 68 52.9
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.2e-09 67.4 167 26.3
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.6e-09 65.5 168 30.4
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 1.0e-08 64.3 164 27.4
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.0e-08 64.3 163 27.0
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.0e-08 64.3 169 29.0
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.5e-07 60.5 160 28.1
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.9e-07 60.1 160 26.9
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 3.3e-07 59.3 163 23.9
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 7.3e-07 58.2 157 22.9
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 1.6e-06 57.0 151 25.8
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 2.8e-06 56.2 161 25.5
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 3.6e-06 55.8 167 25.1
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 4.7e-06 55.5 175 22.9
CARHR158270 Cardamine hirsuta HOM05D009945 ORTHO05D012028 8.1e-06 54.7 160 26.2


User provided reference genes

Program Settings