Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 3.5e-115 418.3 210 100.0
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 3.5e-115 418.3 210 100.0
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 1.9e-113 412.5 210 98.6
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 1.6e-104 382.9 210 90.0
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 1.4e-103 379.8 210 89.5
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 5.1e-66 255.0 169 76.3
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 4.6e-59 231.9 183 66.1
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 5.8e-46 188.3 189 54.5
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 1.7e-45 186.8 196 52.0
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.9e-45 185.3 179 55.9
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 8.7e-42 174.5 186 50.5
C05p07370 Brassica napus HOM05D013394 ORTHO05D009712 3.3e-41 172.6 196 53.6
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 5.0e-13 79.0 164 29.9
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 1.4e-12 77.4 180 30.0
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 5.5e-12 75.5 165 31.5
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 1.2e-11 74.3 169 27.2
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.1e-11 73.6 179 26.8
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 6.1e-11 72.0 179 29.1
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 1.4e-10 70.9 179 28.5
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 1.8e-10 70.5 166 27.1
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 8.8e-10 68.2 167 26.3
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 2.6e-09 66.6 152 28.3
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 4.4e-09 65.9 176 26.1
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 5.7e-09 65.5 166 27.1
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 9.7e-09 64.7 151 27.8
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 9.7e-09 64.7 175 26.9
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 1.3e-08 64.3 147 26.5
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 4.8e-08 62.4 151 27.8
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 4.8e-08 62.4 166 28.3
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 6.3e-08 62.0 146 26.0
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 6.3e-08 62.0 149 29.5
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 8.2e-08 61.6 145 26.9
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 1.4e-07 60.8 147 25.9
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.8e-07 60.5 167 24.0
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.8e-07 60.5 149 28.2
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 2.4e-07 60.1 162 26.5
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.4e-07 60.1 162 26.5
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.4e-07 60.1 162 26.5
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 2.4e-07 60.1 142 26.1
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 3.1e-07 59.7 149 26.2
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 3.1e-07 59.7 143 26.6
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.1e-07 59.7 143 26.6
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.1e-07 59.7 152 26.3
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 3.1e-07 59.7 137 27.7
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 5.3e-07 58.9 144 27.8
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 2.0e-06 57.0 170 25.3
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 4.5e-06 55.8 147 24.5


User provided reference genes

Program Settings