Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29233H Brassica oleracea HOM05D009883 ORTHO05D024588 9.3e-213 743.4 416 100.0
C05p06360 Brassica napus HOM05D009883 ORTHO05D024588 1.0e-203 713.4 420 91.4
C08p33880 Brassica napus HOM05D009883 ORTHO05D024588 1.6e-193 679.5 419 93.1
C08p16430 Brassica napus HOM05D009883 ORTHO05D024588 2.2e-81 307.0 217 79.7
BraA03t13396Z Brassica rapa HOM05D009883 ORTHO05D024588 7.7e-66 255.4 141 94.3
C07p55460 Brassica napus HOM05D009883 ORTHO05D014964 5.5e-40 169.5 209 56.0
C01p16740 Brassica napus HOM05D009883 ORTHO05D014964 1.2e-39 168.3 209 55.5
BcaB02g07877 Brassica carinata HOM05D009883 ORTHO05D014964 1.5e-37 161.4 317 38.5
C03p45410 Brassica napus HOM05D009883 ORTHO05D014964 1.1e-32 145.2 174 51.1
A05p29390 Brassica napus HOM05D009883 ORTHO05D014964 2.2e-28 131.0 144 57.6
BraA01t04009Z Brassica rapa HOM05D009883 ORTHO05D014964 5.4e-27 126.3 151 51.7
BcaC05g30415 Brassica carinata HOM05D010756 ORTHO05D023874 1.1e-22 112.1 268 37.3
BcaC08g44551 Brassica carinata HOM05D010756 ORTHO05D023874 1.1e-22 112.1 262 38.5
BolC4t27575H Brassica oleracea HOM05D009883 ORTHO05D014964 1.5e-21 108.2 153 52.9
BolC3t16808H Brassica oleracea HOM05D009883 ORTHO05D014964 2.9e-20 104.0 135 48.9
BolC6t35759H Brassica oleracea HOM05D010756 ORTHO05D000925 2.9e-20 104.0 188 40.4
C07p34530 Brassica napus HOM05D009883 ORTHO05D042457 1.9e-19 101.3 105 61.0
BolC7t43984H Brassica oleracea HOM05D009883 ORTHO05D042457 1.9e-19 101.3 105 61.0
C08p32300 Brassica napus HOM05D010756 ORTHO05D000925 1.3e-17 95.1 108 53.7
BolC8t50844H Brassica oleracea HOM05D010756 ORTHO05D000925 1.3e-17 95.1 108 53.7
BcaB07g32252 Brassica carinata HOM05D009883 ORTHO05D000925 6.2e-15 86.3 153 38.6
C06p05200 Brassica napus HOM05D057676 ORTHO05D098270 4.0e-14 83.6 69 65.2
C02p10910 Brassica napus HOM05D010911 ORTHO05D041405 1.2e-13 82.0 88 61.4
BolC2t07161H Brassica oleracea HOM05D010911 ORTHO05D041405 1.2e-13 82.0 88 61.4
BcaNung01985 Brassica carinata HOM05D025747 ORTHO05D027206 1.5e-13 81.6 70 71.4
C07p63750 Brassica napus HOM05D025747 ORTHO05D027206 1.5e-13 81.6 70 71.4
BolC6t37992H Brassica oleracea HOM05D010756 ORTHO05D000925 2.0e-13 81.3 124 44.4
BraA02t08675Z Brassica rapa HOM05D001239 ORTHO05D000925 2.6e-13 80.9 143 42.0
BolC8t47090H Brassica oleracea HOM05D009883 ORTHO05D013233 4.4e-13 80.1 89 58.4
BcaB07g32459 Brassica carinata HOM05D009883 ORTHO05D014964 5.8e-13 79.7 59 72.9
C02p48850 Brassica napus HOM05D010911 ORTHO05D024084 9.9e-13 79.0 77 63.6
BolC2t10979H Brassica oleracea HOM05D010911 ORTHO05D024084 2.2e-12 77.8 77 63.6
C01p19620 Brassica napus HOM05D010911 ORTHO05D024084 4.9e-12 76.6 77 62.3
C02p57290 Brassica napus HOM05D025747 ORTHO05D027206 8.3e-12 75.9 50 84.0
BcaC03g16984 Brassica carinata HOM05D010911 ORTHO05D024084 1.1e-11 75.5 77 62.3
C09p12520 Brassica napus HOM05D031612 ORTHO05D041637 1.4e-11 75.1 84 54.8
BraA01t00649Z Brassica rapa HOM05D001239 ORTHO05D000925 1.9e-11 74.7 109 37.6
BolC8t49469H Brassica oleracea HOM05D001239 ORTHO05D000925 2.4e-11 74.3 118 34.7
C03p48840 Brassica napus HOM05D025747 ORTHO05D027206 4.1e-11 73.6 50 82.0
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 9.2e-11 72.4 82 50.0
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 1.6e-10 71.6 95 50.5
C06p08080 Brassica napus HOM05D001239 ORTHO05D000925 2.7e-10 70.9 116 41.4
BcaB06g28528 Brassica carinata HOM05D009883 ORTHO05D014964 4.6e-10 70.1 54 70.4
BolC3t14366H Brassica oleracea HOM05D010756 ORTHO05D000925 4.6e-10 70.1 91 44.0
BraA08t33512Z Brassica rapa HOM05D001239 ORTHO05D000925 4.6e-10 70.1 125 39.2
C04p60840 Brassica napus HOM05D009883 ORTHO05D014964 6.0e-10 69.7 227 33.9
BraA09t38272Z Brassica rapa HOM05D010756 ORTHO05D000925 1.0e-09 68.9 118 39.8
C05p20040 Brassica napus HOM05D009883 ORTHO05D013233 1.3e-09 68.6 64 62.5
BraA06t24278Z Brassica rapa HOM05D013699 ORTHO05D023882 1.7e-09 68.2 86 44.2
BraA04t17503Z Brassica rapa HOM05D001239 ORTHO05D000925 2.3e-09 67.8 117 40.2
BcaC03g13094 Brassica carinata HOM05D012955 ORTHO05D013233 5.1e-09 66.6 67 61.2
BcaC09g51105 Brassica carinata HOM05D009883 ORTHO05D014964 5.1e-09 66.6 63 66.7
BolC2t06001H Brassica oleracea HOM05D012955 ORTHO05D013233 5.1e-09 66.6 67 61.2
BolC2t06823H Brassica oleracea HOM05D010756 ORTHO05D000925 6.6e-09 66.2 71 53.5
BcaC09g51604 Brassica carinata HOM05D010911 ORTHO05D013233 8.6e-09 65.9 55 72.7
BraA07t28081Z Brassica rapa HOM05D001239 ORTHO05D000925 1.5e-08 65.1 119 35.3
BcaC01g01483 Brassica carinata HOM05D001239 ORTHO05D000925 1.9e-08 64.7 99 43.4
BolC1t01117H Brassica oleracea HOM05D012955 ORTHO05D013233 1.9e-08 64.7 69 59.4
BcaC08g44116 Brassica carinata HOM05D012955 ORTHO05D013233 2.5e-08 64.3 69 56.5
BcaC02g12210 Brassica carinata HOM05D000003 ORTHO05D000925 3.3e-08 63.9 159 33.3
BcaNung03341 Brassica carinata HOM05D010911 ORTHO05D032845 3.3e-08 63.9 62 67.7
C07p23330 Brassica napus HOM05D010911 ORTHO05D032845 3.3e-08 63.9 62 67.7
BcaC07g40017 Brassica carinata HOM05D010911 ORTHO05D013233 4.3e-08 63.5 49 71.4
C01p11480 Brassica napus HOM05D012955 ORTHO05D013233 9.5e-08 62.4 69 58.0
BolC1t03157H Brassica oleracea HOM05D010756 ORTHO05D000925 1.2e-07 62.0 66 51.5
BolC7t42866H Brassica oleracea HOM05D010911 ORTHO05D032845 1.6e-07 61.6 62 66.1
BolC7t42027H Brassica oleracea HOM05D001239 ORTHO05D000925 2.1e-07 61.2 107 34.6
BcaC01g06146 Brassica carinata HOM05D001239 ORTHO05D000925 6.2e-07 59.7 127 33.9
BcaC09g51106 Brassica carinata HOM05D013699 ORTHO05D023882 6.2e-07 59.7 73 45.2
BolC2t08127H Brassica oleracea HOM05D010756 ORTHO05D000925 1.1e-06 58.9 103 39.8
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 1.8e-06 58.2 59 59.3
BolC3t17885H Brassica oleracea HOM05D009883 ORTHO05D000925 1.8e-06 58.2 83 45.8
BcaB06g26236 Brassica carinata HOM05D010911 ORTHO05D013233 3.1e-06 57.4 56 62.5
BcaC07g40018 Brassica carinata HOM05D010756 ORTHO05D023874 6.8e-06 56.2 210 28.6
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 6.8e-06 56.2 165 28.5
BcaB01g02457 Brassica carinata HOM05D001239 ORTHO05D000925 8.9e-06 55.8 131 30.5


User provided reference genes

Program Settings