Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29133H Brassica oleracea HOM05D010239 ORTHO05D024417 2.7e-173 612.1 343 100.0
BcaC01g04928 Brassica carinata HOM05D010239 ORTHO05D024417 2.3e-169 599.0 342 98.5
C03p32000 Brassica napus HOM05D010239 ORTHO05D024417 2.3e-169 599.0 342 98.5
C03p00010 Brassica napus HOM05D010239 ORTHO05D024417 1.6e-165 586.3 342 97.1
C02p01760 Brassica napus HOM05D010239 ORTHO05D024417 4.6e-165 584.7 342 97.1
BcaC03g12959 Brassica carinata HOM05D010239 ORTHO05D090479 5.2e-145 518.1 307 96.4
BcaC05g29027 Brassica carinata HOM05D010239 ORTHO05D005077 5.2e-145 518.1 303 97.0
C09p67420 Brassica napus HOM05D010239 ORTHO05D032921 4.5e-128 461.8 267 94.4
BolC9t59504H Brassica oleracea HOM05D010239 ORTHO05D032921 4.5e-128 461.8 267 94.4
BcaB03g12442 Brassica carinata HOM05D003157 ORTHO05D004447 9.9e-128 460.7 279 95.3
BolC3t15543H Brassica oleracea HOM05D010239 ORTHO05D104682 1.1e-110 404.1 213 98.1
BcaB08g34407 Brassica carinata HOM05D010239 ORTHO05D032921 4.2e-110 402.1 234 98.3
A09p11800 Brassica napus HOM05D010239 ORTHO05D021857 2.3e-68 263.5 180 78.9
BcaC03g17842 Brassica carinata HOM05D010239 ORTHO05D021857 1.2e-67 261.2 180 78.9
A08p01330 Brassica napus HOM05D010239 ORTHO05D021857 3.5e-64 249.6 173 78.6
C02p58810 Brassica napus HOM05D010239 ORTHO05D021857 1.5e-62 244.2 265 57.4
BolC2t12312H Brassica oleracea HOM05D010239 ORTHO05D021857 2.4e-57 226.9 180 72.2
BraA08t32183Z Brassica rapa HOM05D010239 ORTHO05D021857 2.9e-50 203.4 173 68.8
BcaB01g01520 Brassica carinata HOM05D010239 ORTHO05D090601 2.7e-48 196.8 204 61.8
BolC9t58576H Brassica oleracea HOM05D010239 ORTHO05D106135 1.1e-41 174.9 114 99.1
BcaC03g18291 Brassica carinata HOM05D010239 ORTHO05D090330 5.2e-36 156.0 102 80.4
BolC6t38748H Brassica oleracea HOM05D007694 ORTHO05D040580 2.2e-18 97.4 133 43.6
C06p36270 Brassica napus HOM05D007694 ORTHO05D040580 3.8e-18 96.7 191 37.2
BolC7t45648H Brassica oleracea HOM05D007694 ORTHO05D018628 6.4e-18 95.9 132 47.7
BcaB01g03011 Brassica carinata HOM05D010239 ORTHO05D095759 7.1e-17 92.4 86 62.8
BcaC02g07899 Brassica carinata HOM05D007694 ORTHO05D032824 3.5e-16 90.1 93 53.8
C04p62200 Brassica napus HOM05D007694 ORTHO05D032824 3.5e-16 90.1 93 53.8
BolC4t27699H Brassica oleracea HOM05D007694 ORTHO05D032824 3.5e-16 90.1 93 53.8
C04p68250 Brassica napus HOM05D007694 ORTHO05D017623 1.3e-15 88.2 199 38.2
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 1.7e-15 87.8 160 41.2
BolC4t27454H Brassica oleracea HOM05D007694 ORTHO05D041000 1.7e-15 87.8 160 41.2
C03p27330 Brassica napus HOM05D007694 ORTHO05D019925 2.3e-15 87.4 99 49.5
BolC3t15113H Brassica oleracea HOM05D007694 ORTHO05D019925 3.9e-15 86.7 99 49.5
BcaC08g46337 Brassica carinata HOM05D007694 ORTHO05D019925 5.1e-15 86.3 99 48.5
BolC1t04613H Brassica oleracea HOM05D007694 ORTHO05D032021 5.1e-15 86.3 199 37.2
C03p03780 Brassica napus HOM05D007694 ORTHO05D032021 6.6e-15 85.9 199 37.2
C03p26050 Brassica napus HOM05D007694 ORTHO05D103481 8.7e-15 85.5 154 40.3
C09p74970 Brassica napus HOM05D007694 ORTHO05D018628 1.5e-14 84.7 139 43.9
BcaC06g34704 Brassica carinata HOM05D007694 ORTHO05D039975 1.9e-14 84.3 154 40.9
C06p41010 Brassica napus HOM05D007694 ORTHO05D019925 1.9e-14 84.3 106 45.3
BcaB06g25426 Brassica carinata HOM05D007694 ORTHO05D017623 2.5e-14 84.0 100 46.0
C03p37800 Brassica napus HOM05D007694 ORTHO05D018628 2.5e-14 84.0 154 40.3
BcaC08g45840 Brassica carinata HOM05D007694 ORTHO05D094686 4.3e-14 83.2 112 44.6
C07p15690 Brassica napus HOM05D007694 ORTHO05D039975 1.3e-13 81.6 154 40.3
BcaNung06212 Brassica carinata HOM05D007694 ORTHO05D032021 2.1e-13 80.9 141 41.1
C02p60690 Brassica napus HOM05D007694 ORTHO05D017623 2.8e-13 80.5 154 39.6
C01p17800 Brassica napus HOM05D007694 ORTHO05D017623 4.8e-13 79.7 154 39.6
BolC1t01714H Brassica oleracea HOM05D007694 ORTHO05D017623 4.8e-13 79.7 154 39.6
BraA03t11220Z Brassica rapa HOM05D007694 ORTHO05D017623 8.1e-13 79.0 155 41.3
BraA06t25774Z Brassica rapa HOM05D007694 ORTHO05D019925 1.1e-12 78.6 99 45.5
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 5.3e-12 76.3 102 45.1
BcaC09g51023 Brassica carinata HOM05D000022 ORTHO05D000071 5.3e-12 76.3 86 50.0
BolC4t23101H Brassica oleracea HOM05D007694 ORTHO05D017623 6.9e-12 75.9 152 36.2
A06p28320 Brassica napus HOM05D007694 ORTHO05D019925 9.0e-12 75.5 99 44.4
BcaC05g26461 Brassica carinata HOM05D007694 ORTHO05D090717 9.9e-11 72.0 78 50.0
BcaB04g18319 Brassica carinata HOM05D007694 ORTHO05D091879 2.2e-10 70.9 84 46.4
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 4.9e-10 69.7 113 42.5
BcaC04g22991 Brassica carinata HOM05D007694 ORTHO05D094549 6.4e-10 69.3 79 48.1
BcaC06g33706 Brassica carinata HOM05D007694 ORTHO05D019980 6.4e-10 69.3 87 51.7
C09p20580 Brassica napus HOM05D007694 ORTHO05D098549 1.4e-09 68.2 74 51.4
BcaC08g43501 Brassica carinata HOM05D007694 ORTHO05D032221 1.9e-09 67.8 115 43.5
BcaC02g07312 Brassica carinata HOM05D007694 ORTHO05D019980 3.2e-09 67.0 79 54.4
C04p52480 Brassica napus HOM05D007694 ORTHO05D017623 5.4e-09 66.2 129 39.5
BcaC07g36849 Brassica carinata HOM05D007694 ORTHO05D019980 9.3e-09 65.5 70 60.0
BcaB08g34287 Brassica carinata HOM05D007694 ORTHO05D018628 2.1e-08 64.3 129 38.8
C05p39780 Brassica napus HOM05D007694 ORTHO05D018628 3.5e-08 63.5 68 54.4
BolC5t32721H Brassica oleracea HOM05D007694 ORTHO05D018628 3.5e-08 63.5 68 54.4
BcaC05g25793 Brassica carinata HOM05D007694 ORTHO05D092144 4.6e-08 63.2 110 40.0
BcaC07g39619 Brassica carinata HOM05D007694 ORTHO05D090536 4.6e-08 63.2 123 40.7
BcaB04g17819 Brassica carinata HOM05D000471 ORTHO05D000199 8.7e-07 58.9 59 55.9
BraA03t14786Z Brassica rapa HOM05D007694 ORTHO05D017623 1.5e-06 58.2 116 39.7
C06p08850 Brassica napus HOM05D007694 ORTHO05D032221 4.3e-06 56.6 119 38.7
BolC5t33755H Brassica oleracea HOM05D010036 ORTHO05D018636 7.4e-06 55.8 103 41.7
BolC6t35963H Brassica oleracea HOM05D007694 ORTHO05D032221 7.4e-06 55.8 105 41.9


User provided reference genes

Program Settings