Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.1e-264 916.0 449 100.0
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.9e-259 898.7 451 98.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 7.1e-259 896.7 449 97.8
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 7.1e-259 896.7 449 97.8
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 1.9e-243 845.5 453 91.8
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 7.9e-242 840.1 449 91.8
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 2.3e-241 838.6 449 91.8
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 8.2e-239 830.1 449 91.3
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 4.1e-230 801.2 453 87.6
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 9.1e-222 773.5 453 85.9
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 2.2e-212 742.3 415 85.8
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.0e-197 692.6 453 73.1
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.0e-196 690.3 414 80.2
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 2.2e-196 689.1 456 73.2
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 6.5e-196 687.6 449 75.7
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 9.4e-195 683.7 451 73.4
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 2.1e-194 682.6 418 78.9
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 6.1e-194 681.0 416 78.4
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.4e-193 679.9 400 86.2
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 1.8e-193 679.5 421 77.4
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.2e-193 677.9 448 74.8
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 5.2e-193 677.9 453 73.5
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.0e-192 676.0 440 72.7
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.4e-192 675.2 448 74.1
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 3.4e-192 675.2 440 73.4
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 4.4e-192 674.9 430 74.7
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 9.8e-192 673.7 419 76.6
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 1.3e-191 673.3 454 71.6
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.3e-191 673.3 421 77.2
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 3.7e-191 671.8 428 75.0
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 3.7e-191 671.8 428 75.0
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 4.8e-191 671.4 417 77.2
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.1e-190 670.2 449 72.4
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.1e-190 668.7 453 72.8
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 3.1e-190 668.7 445 72.6
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 5.4e-190 667.9 422 74.2
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 9.1e-190 667.2 424 75.9
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 9.1e-190 667.2 422 75.1
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.5e-189 664.8 458 72.1
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 1.3e-188 663.3 498 67.9
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.7e-188 662.9 424 75.5
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.3e-188 662.5 467 70.9
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 2.9e-188 662.1 421 74.3
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 6.6e-188 661.0 450 72.7
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.5e-187 659.8 450 72.7
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.9e-187 659.4 421 74.3
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 3.3e-187 658.7 419 76.8
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 3.3e-187 658.7 442 72.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.2e-186 656.8 454 70.9
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 1.2e-186 656.8 449 69.9
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.6e-186 656.4 409 77.3
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.6e-186 656.4 454 70.3
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 2.8e-186 655.6 421 75.8
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 8.0e-186 654.1 448 70.3
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.8e-185 652.9 411 74.9
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.3e-183 646.7 453 72.2
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 2.8e-183 645.6 423 72.6
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.4e-182 643.3 420 73.8
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 3.8e-180 635.2 483 67.3
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 1.4e-177 626.7 420 71.4
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 7.8e-173 610.9 362 80.1
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.9e-171 606.3 429 69.2
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 7.3e-171 604.4 368 77.4
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 7.5e-168 594.3 358 79.6
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 9.8e-168 594.0 389 73.8
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 3.2e-166 589.0 595 54.6
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 6.0e-165 584.7 439 67.0
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 6.0e-165 584.7 418 68.4
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 7.8e-165 584.3 547 58.1
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.0e-164 583.9 406 70.7
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.7e-164 583.2 378 74.6
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 5.1e-164 581.6 423 65.7
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 1.5e-163 580.1 406 67.2
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 3.1e-161 572.4 381 73.0
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 3.5e-157 558.9 407 68.3
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 7.8e-157 557.8 447 64.7
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 1.8e-145 520.0 358 70.9
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 6.9e-145 518.1 342 73.1
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 9.9e-144 514.2 357 68.3
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 3.8e-143 512.3 320 75.6
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 7.8e-141 504.6 378 66.4
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.1e-138 496.5 355 69.3
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 6.0e-133 478.4 340 68.2
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.0e-132 477.6 425 60.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.3e-124 450.7 285 75.8
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.0e-119 434.5 373 60.1
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 6.9e-113 411.8 421 50.1
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.5e-112 410.6 455 48.8
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 2.2e-111 406.8 409 51.6
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 8.8e-108 394.8 404 48.3
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 1.1e-105 387.9 315 61.3
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 7.2e-102 375.2 234 75.6
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.2e-83 314.7 236 64.4
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.8e-81 307.4 230 64.8
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 2.4e-81 307.0 200 74.5
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.4e-65 254.6 427 37.5
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.8e-60 237.7 395 37.2
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 5.2e-60 236.1 155 72.3
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.7e-56 223.8 127 82.7
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.3e-55 220.7 171 67.3
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 9.9e-43 178.7 226 46.9
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.4e-41 174.9 410 29.8
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 9.2e-41 172.2 179 46.9
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 3.9e-39 166.8 435 31.3
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 3.1e-36 157.1 89 83.1
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.9e-34 150.6 89 74.2
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 3.9e-31 140.2 126 57.1
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.5e-30 137.5 114 59.6
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 9.9e-27 125.6 122 52.5
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.0e-23 115.5 72 69.4
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.1e-20 105.5 84 64.3
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 4.9e-18 96.7 65 70.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.0e-16 89.7 45 91.1
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.3e-14 84.0 56 64.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 1.6e-13 81.6 72 55.6
BcaB02g06893 Brassica carinata HOM05D000595 ORTHO05D008454 1.5e-11 75.1 50 78.0
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 3.9e-07 60.5 59 49.2
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 78.4
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 5.1e-07 60.1 37 78.4
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.5e-06 58.5 53 47.2
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 9.6e-06 55.8 35 77.1


User provided reference genes

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