Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29030H Brassica oleracea HOM05D003940 ORTHO05D004461 5.3e-53 210.7 101 100.0
C05p02510 Brassica napus HOM05D003940 ORTHO05D004461 2.6e-52 208.4 101 99.0
A10p02740 Brassica napus HOM05D003940 ORTHO05D004461 2.2e-51 205.3 101 98.0
BraA10t42542Z Brassica rapa HOM05D003940 ORTHO05D004461 2.2e-51 205.3 101 98.0
BcaC05g24452 Brassica carinata HOM05D003940 ORTHO05D004461 2.1e-46 188.7 101 91.1
AT1G04330 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 2.8e-46 188.3 101 89.1
AL1G13930 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 8.1e-46 186.8 101 87.1
Sp1g03140 Schrenkiella parvula HOM05D003940 ORTHO05D004461 1.1e-45 186.4 101 88.1
Carub.0001s0351 Capsella rubella HOM05D003940 ORTHO05D004461 1.8e-45 185.7 101 89.1
CARHR003650 Cardamine hirsuta HOM05D003940 ORTHO05D004461 3.1e-45 184.9 101 88.1
Thhalv10009178m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 9.3e-42 173.3 101 84.2
BcaC07g42173 Brassica carinata HOM05D003940 ORTHO05D004461 3.7e-38 161.4 101 80.2
BcaC07g42193 Brassica carinata HOM05D003940 ORTHO05D004461 3.7e-38 161.4 101 80.2
Aa31LG1G20540 Aethionema arabicum HOM05D003940 ORTHO05D004461 1.4e-16 89.7 95 54.7
Cfa008351 Carpinus fangiana HOM05D003940 ORTHO05D004461 3.1e-13 78.6 99 51.5
THA.LOC104808609 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 9.1e-13 77.0 88 52.3
CSS0017531 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 1.2e-12 76.6 90 50.0
GSVIVG01027728001 Vitis vinifera HOM05D000515 ORTHO05D003188 1.2e-12 76.6 87 51.7
Aqoxy5G00265 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 1.6e-12 76.3 93 48.4
COL.COLO4_15828 Corchorus olitorius HOM05D003940 ORTHO05D004461 7.7e-12 73.9 103 50.5
Sed0016632 Sechium edule HOM05D003940 ORTHO05D004461 1.0e-11 73.6 95 47.4
CSS0034657 Camellia sinensis var. sinensis HOM05D003940 ORTHO05D004461 1.3e-11 73.2 82 48.8
AL3G37790 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 1.7e-11 72.8 86 53.5
Cpa.g.sc44.90 Carica papaya HOM05D003940 ORTHO05D004461 2.2e-11 72.4 83 51.8
Lalb_Chr21g0312371 Lupinus albus HOM05D003940 ORTHO05D004461 2.2e-11 72.4 74 55.4
Ciclev10006290m.g Citrus clementina HOM05D003940 ORTHO05D004461 2.9e-11 72.0 96 46.9
Lsat_1_v5_gn_5_72560 Lactuca sativa HOM05D003940 ORTHO05D004461 3.8e-11 71.6 86 50.0
PGR031G1035 Punica granatum HOM05D003940 ORTHO05D004461 3.8e-11 71.6 98 43.9
Sc19g0003500 Simmondsia chinensis HOM05D003940 ORTHO05D004461 3.8e-11 71.6 87 50.6
CiPaw.01G188000 Carya illinoinensis HOM05D003940 ORTHO05D004461 5.0e-11 71.2 85 48.2
Haze_11334 Corylus avellana HOM05D003940 ORTHO05D004461 5.0e-11 71.2 99 48.5
THA.LOC104822808 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 6.5e-11 70.9 97 50.5
BcaB06g26449 Brassica carinata HOM05D003940 ORTHO05D004461 8.5e-11 70.5 93 51.6
FAN22G2069 Fragaria x ananassa HOM05D003940 ORTHO05D004461 8.5e-11 70.5 105 43.8
TAR365G0320 Trochodendron aralioides HOM05D003940 ORTHO05D004461 1.1e-10 70.1 105 45.7
Actinidia04462 Actinidia chinensis HOM05D003940 ORTHO05D004461 1.5e-10 69.7 86 46.5
Thhalv10021654m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 1.5e-10 69.7 87 49.4
FAN17G2041 Fragaria x ananassa HOM05D003940 ORTHO05D004461 1.5e-10 69.7 102 44.1
Potri.010G073900 Populus trichocarpa HOM05D003940 ORTHO05D004461 1.5e-10 69.7 106 45.3
ClCG06G006840 Citrullus lanatus HOM05D003940 ORTHO05D004461 2.5e-10 68.9 86 52.3
Migut.N00250 Erythranthe guttata HOM05D003940 ORTHO05D004461 2.5e-10 68.9 89 52.8
Glyma.10G188200 Glycine max HOM05D003940 ORTHO05D004461 2.5e-10 68.9 83 51.8
MBI18_g43342_MAGBIO Magnolia biondii HOM05D003940 ORTHO05D004461 2.5e-10 68.9 95 46.3
DCAR_027292 Daucus carota HOM05D003940 ORTHO05D004461 3.2e-10 68.6 97 47.4
DCAR_027293 Daucus carota HOM05D003940 ORTHO05D004461 3.2e-10 68.6 97 47.4
Hma1.2p1_0986F.1_g244370 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 3.2e-10 68.6 87 46.0
THA.LOC104822248 Tarenaya hassleriana HOM05D003940 ORTHO05D004461 3.2e-10 68.6 96 50.0
TWI73G0411 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 3.2e-10 68.6 93 44.1
Duzib212G0271 Durio zibethinus HOM05D003940 ORTHO05D004461 4.2e-10 68.2 103 46.6
ECA233G6082 Erigeron canadensis HOM05D003940 ORTHO05D004461 4.2e-10 68.2 83 49.4
FvH4_4g03100 Fragaria vesca HOM05D003940 ORTHO05D004461 4.2e-10 68.2 105 43.8
FAN12G3937 Fragaria x ananassa HOM05D003940 ORTHO05D004461 4.2e-10 68.2 110 43.6
QL06p016655 Quercus lobata HOM05D003940 ORTHO05D004461 5.5e-10 67.8 101 47.5
Thecc.04G250000 Theobroma cacao HOM05D003940 ORTHO05D004461 7.2e-10 67.4 105 43.8
TAR362G0514 Trochodendron aralioides HOM05D003940 ORTHO05D004461 7.2e-10 67.4 101 46.5
Gohir.A02G037100 Gossypium hirsutum HOM05D003940 ORTHO05D004461 9.4e-10 67.0 105 41.9
Lj5g0009696 Lotus japonicus HOM05D003940 ORTHO05D004461 9.4e-10 67.0 78 53.8
Lalb_Chr19g0128361 Lupinus albus HOM05D003940 ORTHO05D004461 9.4e-10 67.0 96 51.0
AUR62015478 Chenopodium quinoa HOM05D000816 ORTHO05D005265 1.2e-09 66.6 94 47.9
AT3G23170 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 1.6e-09 66.2 86 52.3
A07p09330 Brassica napus HOM05D003940 ORTHO05D004461 1.6e-09 66.2 94 47.9
HanXRQChr03g0092241 Helianthus annuus HOM05D003940 ORTHO05D004461 1.6e-09 66.2 84 46.4
Hma1.2p1_0310F.1_g120730 Hydrangea macrophylla HOM05D003940 ORTHO05D004461 1.6e-09 66.2 108 44.4
BolC7t41935H Brassica oleracea HOM05D003940 ORTHO05D004461 2.1e-09 65.9 94 48.9
CANSAT78G1835 Cannabis sativa HOM05D003940 ORTHO05D004461 2.1e-09 65.9 95 46.3
Rhsim04G0188200 Rhododendron simsii HOM05D003940 ORTHO05D004461 2.1e-09 65.9 90 44.4
BraA07t28731Z Brassica rapa HOM05D003940 ORTHO05D004461 2.7e-09 65.5 94 47.9
Gohir.D02G043800 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.7e-09 65.5 95 46.3
HanXRQChr13g0425481 Helianthus annuus HOM05D003940 ORTHO05D004461 2.7e-09 65.5 89 46.1
Psat6g132880 Pisum sativum HOM05D003940 ORTHO05D004461 2.7e-09 65.5 80 52.5
TWI09G0780 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 2.7e-09 65.5 100 44.0
EL10Ac3g05913 Beta vulgaris HOM05D003940 ORTHO05D004461 3.6e-09 65.1 89 46.1
C07p14380 Brassica napus HOM05D003940 ORTHO05D004461 3.6e-09 65.1 94 48.9
Glyma.20G202600 Glycine max HOM05D003940 ORTHO05D004461 3.6e-09 65.1 83 50.6
Lsat_1_v5_gn_3_122140 Lactuca sativa HOM05D003940 ORTHO05D004461 3.6e-09 65.1 89 46.1
MD13G1210200 Malus domestica HOM05D003940 ORTHO05D004461 3.6e-09 65.1 102 47.1
Manes.15G038200 Manihot esculenta HOM05D003940 ORTHO05D004461 3.6e-09 65.1 103 40.8
Prupe.1G034700 Prunus persica HOM05D003940 ORTHO05D004461 3.6e-09 65.1 103 45.6
RcHm_v2.0_Chr4g0391391 Rosa chinensis HOM05D003940 ORTHO05D004461 3.6e-09 65.1 105 41.9
Sabra10G0034600 Salix brachista HOM05D003940 ORTHO05D004461 3.6e-09 65.1 104 43.3
TPR.G15869 Trifolium pratense HOM05D003940 ORTHO05D004461 3.6e-09 65.1 98 48.0
Phvul.007G129450 Phaseolus vulgaris HOM05D003940 ORTHO05D004461 4.7e-09 64.7 82 50.0
TAR636G1753 Trochodendron aralioides HOM05D003940 ORTHO05D004461 4.7e-09 64.7 100 45.0
Dinv44656 Davidia involucrata HOM05D003940 ORTHO05D004461 6.1e-09 64.3 101 45.5
Gorai.005G048200 Gossypium raimondii HOM05D003940 ORTHO05D004461 6.1e-09 64.3 95 45.3
Peaxi162Scf00024g01711 Petunia axillaris HOM05D003940 ORTHO05D004461 6.1e-09 64.3 99 42.4
vmacro08448 Vaccinium macrocarpon HOM05D003940 ORTHO05D004461 6.1e-09 64.3 95 43.2
CiPaw.02G114800 Carya illinoinensis HOM05D003940 ORTHO05D004461 8.0e-09 63.9 88 45.5
Potri.008G164801 Populus trichocarpa HOM05D003940 ORTHO05D004461 8.0e-09 63.9 103 43.7
Sp3g20820 Schrenkiella parvula HOM05D003940 ORTHO05D004461 8.0e-09 63.9 94 45.7
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 8.0e-09 63.9 94 45.7
Gohir.D09G226800 Gossypium hirsutum HOM05D003940 ORTHO05D004461 1.0e-08 63.5 106 40.6
CARHR220660 Cardamine hirsuta HOM05D003940 ORTHO05D004461 1.4e-08 63.2 96 40.6
Ca_09815_v3 Cicer arietinum L. HOM05D003940 ORTHO05D004461 1.4e-08 63.2 85 49.4
Psat6g138240 Pisum sativum HOM05D003940 ORTHO05D004461 1.4e-08 63.2 98 43.9
PSO210G0601 Papaver somniferum HOM05D003940 ORTHO05D004461 1.8e-08 62.8 100 40.0
Duzib151G0370 Durio zibethinus HOM05D003940 ORTHO05D004461 2.3e-08 62.4 105 43.8
Gohir.D10G154400 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.3e-08 62.4 104 43.3
Gorai.011G172300 Gossypium raimondii HOM05D003940 ORTHO05D004461 2.3e-08 62.4 104 43.3
Solyc09g089650.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 2.3e-08 62.4 97 43.3
Gohir.A09G225100 Gossypium hirsutum HOM05D003940 ORTHO05D004461 3.0e-08 62.0 106 40.6
Gorai.006G248700 Gossypium raimondii HOM05D003940 ORTHO05D004461 3.0e-08 62.0 106 40.6
TAR602G0001 Trochodendron aralioides HOM05D003940 ORTHO05D004461 3.0e-08 62.0 78 44.9
AUR62002262 Chenopodium quinoa HOM05D003940 ORTHO05D004461 4.0e-08 61.6 88 45.5
Medtr1g073910 Medicago truncatula HOM05D003940 ORTHO05D004461 5.2e-08 61.2 91 48.4
Sed0008236 Sechium edule HOM05D003940 ORTHO05D004461 5.2e-08 61.2 70 51.4
Sc13g0005150 Simmondsia chinensis HOM05D003940 ORTHO05D004461 5.2e-08 61.2 88 43.2
Solyc06g053700.1 Solanum lycopersicum HOM05D003940 ORTHO05D004461 5.2e-08 61.2 94 42.6
Sopen06g018810 Solanum pennellii HOM05D003940 ORTHO05D004461 5.2e-08 61.2 94 42.6
Sc25g0004050 Simmondsia chinensis HOM05D003940 ORTHO05D004461 6.7e-08 60.8 91 45.1
Aqoxy2G03616 Aquilegia oxysepala HOM05D003940 ORTHO05D004461 8.8e-08 60.5 106 36.8
MELO3C022975.2 Cucumis melo HOM05D003940 ORTHO05D004461 8.8e-08 60.5 111 38.7
MD16G1213100 Malus domestica HOM05D003940 ORTHO05D004461 8.8e-08 60.5 98 44.9
PGSC0003DMG400017255 Solanum tuberosum HOM05D003940 ORTHO05D004461 8.8e-08 60.5 95 43.2
AT4G14450 Arabidopsis thaliana HOM05D003940 ORTHO05D004461 1.1e-07 60.1 102 41.2
Carub.0003s2339 Capsella rubella HOM05D003940 ORTHO05D004461 1.1e-07 60.1 89 44.9
Peaxi162Scf00325g00012 Petunia axillaris HOM05D003940 ORTHO05D004461 1.5e-07 59.7 98 39.8
Peaxi162Scf00325g00015 Petunia axillaris HOM05D003940 ORTHO05D004461 1.5e-07 59.7 98 39.8
SalBow3G4424 Salvia bowleyana HOM05D003940 ORTHO05D004461 1.5e-07 59.7 91 48.4
Aa31LG8G9650 Aethionema arabicum HOM05D003940 ORTHO05D004461 2.0e-07 59.3 95 43.2
AL7G41690 Arabidopsis lyrata HOM05D003940 ORTHO05D004461 2.0e-07 59.3 98 43.9
CsaV3_2G012950 Cucumis sativus L. HOM05D003940 ORTHO05D004461 2.0e-07 59.3 99 41.4
Nitab4.5_0000342g0180 Nicotiana tabacum HOM05D003940 ORTHO05D004461 2.0e-07 59.3 102 41.2
SalBow2G1766 Salvia bowleyana HOM05D003940 ORTHO05D004461 2.0e-07 59.3 94 44.7
Sopen09g032590 Solanum pennellii HOM05D003940 ORTHO05D004461 2.0e-07 59.3 97 42.3
SGA_v2.0_scaffold101G29832 Striga asiatica HOM05D003940 ORTHO05D004461 2.0e-07 59.3 95 45.3
Cc03_g05120 Coffea canephora HOM05D003940 ORTHO05D004461 2.6e-07 58.9 97 44.3
Gohir.A10G112500 Gossypium hirsutum HOM05D003940 ORTHO05D004461 2.6e-07 58.9 104 42.3
Sp7g12530 Schrenkiella parvula HOM05D003940 ORTHO05D004461 2.6e-07 58.9 85 48.2
PGSC0003DMG400016324 Solanum tuberosum HOM05D003940 ORTHO05D004461 2.6e-07 58.9 94 41.5
CARHR099110 Cardamine hirsuta HOM05D003940 ORTHO05D004461 3.3e-07 58.5 85 48.2
PGR004G1022 Punica granatum HOM05D003940 ORTHO05D004461 3.3e-07 58.5 95 38.9
Oeu025569.1 Olea europaea HOM05D003940 ORTHO05D004461 4.4e-07 58.2 83 49.4
Nn1g00062 Nelumbo nucifera HOM05D003940 ORTHO05D004461 5.7e-07 57.8 122 36.1
Nn1g02702 Nelumbo nucifera HOM05D003940 ORTHO05D004461 5.7e-07 57.8 122 36.1
Glyma.10G008021 Glycine max HOM05D003940 ORTHO05D004461 7.5e-07 57.4 83 48.2
MSTRG.9915 Avicennia marina HOM05D003940 ORTHO05D004461 9.7e-07 57.0 92 43.5
CAN.G738.11 Capsicum annuum HOM05D003940 ORTHO05D004461 9.7e-07 57.0 100 40.0
Oeu063884.1 Olea europaea HOM05D003940 ORTHO05D004461 9.7e-07 57.0 82 48.8
Thhalv10027546m.g Eutrema salsugineum HOM05D003940 ORTHO05D004461 1.3e-06 56.6 90 46.7
TWI53G1738 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 1.3e-06 56.6 81 48.1
Nitab4.5_0007234g0020 Nicotiana tabacum HOM05D003940 ORTHO05D004461 1.7e-06 56.2 100 39.0
Carub.0007s2777 Capsella rubella HOM05D003940 ORTHO05D004461 2.2e-06 55.8 85 40.0
Migut.G00451 Erythranthe guttata HOM05D003940 ORTHO05D004461 2.2e-06 55.8 85 44.7
BraA03t13459Z Brassica rapa HOM05D003940 ORTHO05D004461 2.8e-06 55.5 91 42.9
CsaV3_3G012380 Cucumis sativus L. HOM05D000244 ORTHO05D000179 2.8e-06 55.5 84 45.2
Gorai.006G070500 Gossypium raimondii HOM05D003940 ORTHO05D004461 2.8e-06 55.5 82 45.1
Lj6g0004880 Lotus japonicus HOM05D003940 ORTHO05D004461 2.8e-06 55.5 98 42.9
Migut.G00452 Erythranthe guttata HOM05D003940 ORTHO05D004461 3.7e-06 55.1 85 42.4
A03p43180 Brassica napus HOM05D003940 ORTHO05D004461 6.3e-06 54.3 80 43.8
Lalb_Chr03g0037101 Lupinus albus HOM05D003940 ORTHO05D004461 8.2e-06 53.9 85 47.1
SHI00703 Sapria himalayana HOM05D003940 ORTHO05D004461 8.2e-06 53.9 87 39.1
TWI53G1893 Tripterygium wilfordii HOM05D003940 ORTHO05D004461 8.2e-06 53.9 81 46.9


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