Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 1.7e-67 259.2 132 100.0
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 7.1e-66 253.8 132 97.0
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 2.1e-65 252.3 132 97.0
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 1.3e-64 249.6 132 96.2
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 5.1e-64 247.7 132 94.7
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 1.1e-63 246.5 130 95.4
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-63 245.4 132 93.9
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 5.6e-63 244.2 130 94.6
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 5.6e-63 244.2 132 94.7
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 9.6e-63 243.4 137 92.7
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 1.4e-61 239.6 132 94.7
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 3.0e-56 221.9 116 95.7
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 1.1e-55 219.9 132 89.4
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 2.5e-55 218.8 116 94.0
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 4.3e-55 218.0 116 94.0
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 7.4e-55 217.2 116 93.1
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 7.4e-55 217.2 116 94.0
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 4.0e-53 211.5 108 99.1
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 4.0e-53 211.5 108 99.1
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 9.0e-53 210.3 116 89.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.2e-52 209.9 116 89.7
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.2e-52 209.9 116 89.7
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 2.6e-52 208.8 116 88.8
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 4.5e-52 208.0 116 89.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 4.5e-52 208.0 116 89.7
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 2.1e-49 199.1 116 88.8
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 5.1e-48 194.5 116 84.5
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 5.1e-48 194.5 116 84.5
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 9.6e-47 190.3 99 98.0
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 2.4e-45 185.7 111 90.1
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 6.9e-45 184.1 116 82.8
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 2.3e-40 169.1 94 92.6
BcaC09g50234 Brassica carinata HOM05D000353 ORTHO05D005681 5.0e-35 151.4 83 92.8
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 8.7e-32 140.6 78 92.3
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 8.2e-30 134.0 85 76.5
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 1.1e-29 133.7 117 59.8
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 2.9e-27 125.6 116 53.4
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 2.9e-27 125.6 116 53.4
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 1.4e-26 123.2 116 53.4
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 2.5e-26 122.5 116 51.7
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 2.5e-26 122.5 116 51.7
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 3.2e-26 122.1 116 51.7
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 4.2e-26 121.7 116 52.6
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 5.5e-26 121.3 116 52.6
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 5.5e-26 121.3 116 52.6
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 5.5e-26 121.3 116 52.6
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 7.2e-26 120.9 113 53.1
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 7.2e-26 120.9 113 53.1
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 9.4e-26 120.6 116 52.6
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 9.4e-26 120.6 116 52.6
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 2.1e-25 119.4 116 51.7
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 6.1e-25 117.9 116 52.6
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 1.0e-24 117.1 116 50.9
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 5.7e-23 111.3 107 54.2
C09p17520 Brassica napus HOM05D000353 ORTHO05D099299 2.8e-22 109.0 72 84.7
BcaB01g02874 Brassica carinata HOM05D000353 ORTHO05D011975 4.5e-20 101.7 85 63.5
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 7.7e-20 100.9 113 46.9
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 1.0e-19 100.5 116 44.0
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 3.8e-19 98.6 113 46.9
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 1.4e-18 96.7 116 40.5
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 4.2e-18 95.1 116 45.7
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 7.2e-18 94.4 116 44.0
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 9.4e-18 94.0 116 45.7
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.2e-17 93.6 112 42.0
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 1.2e-17 93.6 97 49.5
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 3.6e-17 92.0 95 52.6
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 6.1e-17 91.3 112 41.1
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 6.1e-17 91.3 112 41.1
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 1.0e-16 90.5 112 41.1
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.8e-16 89.7 112 39.3
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 8.8e-16 87.4 112 40.2
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 8.8e-16 87.4 95 50.5
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 3.3e-15 85.5 116 40.5
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 7.4e-15 84.3 116 38.8
BolC7t42422H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-14 83.6 78 53.8
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 2.2e-14 82.8 106 41.5
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 2.8e-14 82.4 106 39.6
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 4.8e-14 81.6 87 50.6
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 1.1e-13 80.5 91 44.0
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 1.1e-13 80.5 106 44.3
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 1.4e-13 80.1 87 49.4
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 1.4e-13 80.1 112 36.6
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 3.1e-13 79.0 114 37.7
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 9.1e-13 77.4 114 36.8
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 9.1e-13 77.4 114 36.8
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 1.6e-12 76.6 95 43.2
BcaB01g02451 Brassica carinata HOM05D003591 ORTHO05D021638 3.5e-12 75.5 115 37.4
BcaC05g27208 Brassica carinata HOM05D000353 ORTHO05D011975 5.9e-12 74.7 69 53.6
BolC8t48064H Brassica oleracea HOM05D000353 ORTHO05D033592 1.3e-11 73.6 105 38.1
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 2.2e-11 72.8 91 48.4
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 3.2e-10 68.9 109 40.4
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 4.2e-10 68.6 86 41.9
BcaB01g01176 Brassica carinata HOM05D000353 ORTHO05D092964 7.2e-10 67.8 75 41.3
C07p19110 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-09 66.6 62 51.6
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 4.7e-09 65.1 78 43.6
A05p21310 Brassica napus HOM05D000353 ORTHO05D042653 2.3e-08 62.8 116 32.8
BcaB02g11108 Brassica carinata HOM05D000353 ORTHO05D005681 5.2e-08 61.6 89 38.2
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 5.2e-08 61.6 99 34.3
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 1.2e-07 60.5 58 51.7
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 3.3e-07 58.9 64 48.4
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 3.3e-07 58.9 64 42.2
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-07 58.5 107 36.4
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 4.4e-07 58.5 107 36.4
BcaB05g21746 Brassica carinata HOM05D007309 ORTHO05D010099 5.7e-07 58.2 114 34.2
BcaB07g33228 Brassica carinata HOM05D000353 ORTHO05D023971 9.7e-07 57.4 89 36.0
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-07 57.4 107 35.5
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 9.7e-07 57.4 107 35.5
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 9.7e-07 57.4 107 35.5
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 2.2e-06 56.2 107 34.6
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 2.8e-06 55.8 105 32.4
BolC9t59255H Brassica oleracea HOM05D000353 ORTHO05D105477 2.8e-06 55.8 32 81.2
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 3.7e-06 55.5 73 42.5
A08p10030 Brassica napus HOM05D000353 ORTHO05D033592 3.7e-06 55.5 76 38.2
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-06 55.5 107 33.6
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-06 55.5 107 34.6
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-06 55.5 107 34.6
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 3.7e-06 55.5 107 33.6
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 4.8e-06 55.1 107 33.6
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 4.8e-06 55.1 53 50.9
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 6.3e-06 54.7 107 33.6
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-06 54.7 108 36.1
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 6.3e-06 54.7 107 34.6
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 8.2e-06 54.3 56 51.8
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 8.2e-06 54.3 107 33.6
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 8.2e-06 54.3 56 51.8


User provided reference genes

Program Settings