Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26390H Brassica oleracea HOM05D000614 ORTHO05D000463 6.1e-64 247.3 122 100.0
BraA06t25367Z Brassica rapa HOM05D000614 ORTHO05D000463 3.1e-47 191.8 111 86.5
A06p22770 Brassica napus HOM05D000614 ORTHO05D000463 4.0e-47 191.4 111 86.5
BraA06t25362Z Brassica rapa HOM05D000614 ORTHO05D000463 8.9e-47 190.3 111 85.6
C04p47920 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
C04p47930 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
C04p47950 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
C04p47960 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
C04p47980 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
BolC4t26381H Brassica oleracea HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
BolC4t26391H Brassica oleracea HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
BolC4t26392H Brassica oleracea HOM05D000614 ORTHO05D000463 1.2e-46 189.9 97 96.9
C04p47900 Brassica napus HOM05D000614 ORTHO05D000463 4.4e-46 188.0 97 95.9
C04p47760 Brassica napus HOM05D000614 ORTHO05D000463 7.5e-46 187.2 97 94.8
C04p47780 Brassica napus HOM05D000614 ORTHO05D000463 7.5e-46 187.2 97 95.9
BolC4t26379H Brassica oleracea HOM05D000614 ORTHO05D000463 2.2e-45 185.7 97 93.8
C04p47880 Brassica napus HOM05D000614 ORTHO05D000463 6.4e-45 184.1 92 97.8
BraA06t25370Z Brassica rapa HOM05D000614 ORTHO05D000463 6.0e-43 177.6 97 88.7
A06p22790 Brassica napus HOM05D000614 ORTHO05D000463 7.8e-43 177.2 97 88.7
BraA06t25366Z Brassica rapa HOM05D000614 ORTHO05D000463 7.8e-43 177.2 97 88.7
BraA06t25371Z Brassica rapa HOM05D000614 ORTHO05D000463 7.8e-43 177.2 97 88.7
A04p13980 Brassica napus HOM05D000614 ORTHO05D000463 1.3e-42 176.4 97 88.7
BraA04t17060Z Brassica rapa HOM05D000614 ORTHO05D000463 1.3e-42 176.4 97 88.7
BraA06t25358Z Brassica rapa HOM05D000614 ORTHO05D000463 1.3e-42 176.4 96 89.6
BraA06t25359Z Brassica rapa HOM05D000614 ORTHO05D000463 1.3e-42 176.4 96 89.6
BolC4t26380H Brassica oleracea HOM05D000614 ORTHO05D000463 1.7e-42 176.0 97 90.7
BraA04t17059Z Brassica rapa HOM05D000614 ORTHO05D000463 3.9e-42 174.9 97 87.6
BraA06t25364Z Brassica rapa HOM05D000614 ORTHO05D000463 3.9e-42 174.9 97 87.6
A06p22820 Brassica napus HOM05D000614 ORTHO05D000463 5.1e-42 174.5 97 87.6
BraA06t25363Z Brassica rapa HOM05D000614 ORTHO05D000463 5.1e-42 174.5 96 88.5
A06p22800 Brassica napus HOM05D000614 ORTHO05D000463 6.6e-42 174.1 97 87.6
A06p22760 Brassica napus HOM05D000614 ORTHO05D000463 8.6e-42 173.7 96 88.5
BcaC02g08991 Brassica carinata HOM05D000614 ORTHO05D000463 9.5e-41 170.2 85 97.6
BraA04t17061Z Brassica rapa HOM05D000614 ORTHO05D000463 9.5e-41 170.2 97 85.6
A06p22810 Brassica napus HOM05D000614 ORTHO05D000463 2.3e-39 165.6 99 83.8
A04p13970 Brassica napus HOM05D000614 ORTHO05D000463 9.9e-38 160.2 85 90.6
BcaC02g08993 Brassica carinata HOM05D000614 ORTHO05D000463 3.2e-36 155.2 83 91.6
A04p13950 Brassica napus HOM05D000614 ORTHO05D000463 3.2e-36 155.2 85 88.2
A04p13990 Brassica napus HOM05D000614 ORTHO05D000463 2.1e-35 152.5 83 88.0
BcaB01g02936 Brassica carinata HOM05D000614 ORTHO05D000463 6.0e-35 151.0 96 77.1
BcaB06g28027 Brassica carinata HOM05D000614 ORTHO05D000463 6.0e-35 151.0 96 79.2
BcaC02g08388 Brassica carinata HOM05D000614 ORTHO05D000463 5.1e-34 147.9 92 78.3
C04p54800 Brassica napus HOM05D000614 ORTHO05D000463 5.1e-34 147.9 92 78.3
C04p47940 Brassica napus HOM05D000614 ORTHO05D000463 6.6e-34 147.5 80 92.5
C04p54880 Brassica napus HOM05D000614 ORTHO05D000463 6.6e-34 147.5 92 78.3
C04p54920 Brassica napus HOM05D000614 ORTHO05D000463 6.6e-34 147.5 92 78.3
BraA04t17530Z Brassica rapa HOM05D000614 ORTHO05D000463 8.6e-34 147.1 97 75.3
C04p54820 Brassica napus HOM05D000614 ORTHO05D000463 1.1e-33 146.7 92 77.2
C04p54870 Brassica napus HOM05D000614 ORTHO05D000463 1.1e-33 146.7 92 77.2
C04p54770 Brassica napus HOM05D000614 ORTHO05D000463 1.9e-33 146.0 92 77.2
BolC4t27024H Brassica oleracea HOM05D000614 ORTHO05D000463 1.9e-33 146.0 92 77.2
BolC4t27026H Brassica oleracea HOM05D000614 ORTHO05D000463 1.9e-33 146.0 92 77.2
A08p06200 Brassica napus HOM05D000614 ORTHO05D000463 2.5e-33 145.6 92 77.2
BraA04t16672Z Brassica rapa HOM05D000614 ORTHO05D000463 3.3e-33 145.2 92 76.1
BraA04t17531Z Brassica rapa HOM05D000614 ORTHO05D000463 3.3e-33 145.2 97 75.3
A04p19320 Brassica napus HOM05D000614 ORTHO05D000463 4.3e-33 144.8 92 77.2
A10p09470 Brassica napus HOM05D000614 ORTHO05D000463 2.8e-32 142.1 92 77.2
C04p47790 Brassica napus HOM05D000614 ORTHO05D000463 2.8e-32 142.1 80 90.0
C04p47970 Brassica napus HOM05D000614 ORTHO05D000463 8.1e-32 140.6 76 92.1
C04p47990 Brassica napus HOM05D000614 ORTHO05D000463 8.1e-32 140.6 76 92.1
A02p29700 Brassica napus HOM05D000614 ORTHO05D000463 1.1e-31 140.2 92 75.0
BolC4t27029H Brassica oleracea HOM05D000614 ORTHO05D000463 1.4e-31 139.8 92 75.0
BraA08t32622Z Brassica rapa HOM05D000614 ORTHO05D000463 1.4e-31 139.8 92 75.0
A04p10100 Brassica napus HOM05D000614 ORTHO05D000463 2.4e-31 139.0 92 73.9
C04p47770 Brassica napus HOM05D000614 ORTHO05D000463 3.1e-31 138.7 80 87.5
A08p04410 Brassica napus HOM05D000614 ORTHO05D000463 4.0e-31 138.3 92 73.9
A04p19200 Brassica napus HOM05D000614 ORTHO05D000463 2.6e-30 135.6 92 73.9
BraA10t43022Z Brassica rapa HOM05D000614 ORTHO05D000463 1.3e-29 133.3 85 77.6
BraA04t17521Z Brassica rapa HOM05D000614 ORTHO05D000463 6.4e-29 131.0 83 77.1
BraA08t32467Z Brassica rapa HOM05D000614 ORTHO05D000463 6.4e-29 131.0 83 75.9
BraA02t07994Z Brassica rapa HOM05D000614 ORTHO05D000463 1.9e-28 129.4 83 75.9
BraA08t32621Z Brassica rapa HOM05D000614 ORTHO05D000463 5.4e-28 127.9 83 75.9
C04p54790 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-27 126.7 81 74.1
C04p54850 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-27 126.7 81 74.1
C04p54900 Brassica napus HOM05D000614 ORTHO05D000463 1.2e-27 126.7 81 74.1
C04p54810 Brassica napus HOM05D000614 ORTHO05D000463 3.5e-27 125.2 81 72.8
C04p54860 Brassica napus HOM05D000614 ORTHO05D000463 3.5e-27 125.2 81 72.8
A04p19360 Brassica napus HOM05D000614 ORTHO05D000463 7.8e-27 124.0 81 74.1
BraA04t17532Z Brassica rapa HOM05D000614 ORTHO05D000463 3.9e-26 121.7 83 74.7
BolC4t27027H Brassica oleracea HOM05D000614 ORTHO05D000463 5.1e-26 121.3 81 71.6
A04p19340 Brassica napus HOM05D000614 ORTHO05D000463 1.1e-25 120.2 81 71.6
A04p19350 Brassica napus HOM05D000614 ORTHO05D000463 1.1e-25 120.2 81 71.6
A04p19330 Brassica napus HOM05D000614 ORTHO05D000463 1.5e-25 119.8 81 71.6
A06p22840 Brassica napus HOM05D000614 ORTHO05D000463 4.8e-24 114.8 61 91.8
Sp7g01030 Schrenkiella parvula HOM05D000614 ORTHO05D000463 1.8e-23 112.8 85 69.4
BcaNung06290 Brassica carinata HOM05D000614 ORTHO05D000463 2.0e-22 109.4 96 63.5
BcaB01g02940 Brassica carinata HOM05D000614 ORTHO05D000463 1.3e-21 106.7 64 84.4
BcaB04g18726 Brassica carinata HOM05D000614 ORTHO05D000463 2.2e-21 105.9 96 56.2
BcaC02g08385 Brassica carinata HOM05D000614 ORTHO05D000463 4.9e-21 104.8 60 81.7
BcaC02g08386 Brassica carinata HOM05D000614 ORTHO05D000463 4.9e-21 104.8 60 81.7
BcaC02g08387 Brassica carinata HOM05D000614 ORTHO05D000463 4.9e-21 104.8 60 81.7
BcaC02g08389 Brassica carinata HOM05D000614 ORTHO05D000463 4.9e-21 104.8 60 81.7
BcaC02g08392 Brassica carinata HOM05D000614 ORTHO05D000463 1.4e-20 103.2 60 80.0
Sp7g03660 Schrenkiella parvula HOM05D000614 ORTHO05D000463 1.9e-20 102.8 86 62.8
BcaC02g08390 Brassica carinata HOM05D000614 ORTHO05D000463 2.4e-20 102.4 60 80.0
BcaNung06292 Brassica carinata HOM05D000614 ORTHO05D000463 2.4e-20 102.4 92 59.8
BcaB02g10656 Brassica carinata HOM05D000614 ORTHO05D000463 6.6e-18 94.4 85 55.3
BcaB04g18729 Brassica carinata HOM05D000614 ORTHO05D000463 6.6e-18 94.4 85 55.3
BcaB04g18728 Brassica carinata HOM05D000614 ORTHO05D000463 1.1e-17 93.6 85 54.1
BcaB04g18730 Brassica carinata HOM05D000614 ORTHO05D000463 2.5e-17 92.4 85 54.1
AL7G49060 Arabidopsis lyrata HOM05D000614 ORTHO05D000463 2.4e-12 75.9 96 49.0
A04p13960 Brassica napus HOM05D000614 ORTHO05D000463 1.6e-11 73.2 38 89.5
BcaNung06291 Brassica carinata HOM05D000614 ORTHO05D000463 1.3e-10 70.1 44 75.0
AT5G40680 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 3.7e-08 62.0 110 39.1
BcaB07g30186 Brassica carinata HOM05D000614 ORTHO05D000463 3.7e-08 62.0 111 42.3
Carub.0007s3480 Capsella rubella HOM05D000614 ORTHO05D000463 6.2e-08 61.2 124 41.1
BcaC06g33859 Brassica carinata HOM05D000614 ORTHO05D000463 4.0e-07 58.5 114 39.5
BolC7t44134H Brassica oleracea HOM05D000614 ORTHO05D000463 4.0e-07 58.5 114 39.5
BraA06t27072Z Brassica rapa HOM05D000614 ORTHO05D000463 1.2e-06 57.0 114 38.6
BcaC06g33856 Brassica carinata HOM05D000614 ORTHO05D000463 2.0e-06 56.2 110 40.0
BcaC03g17427 Brassica carinata HOM05D000614 ORTHO05D000463 3.4e-06 55.5 113 38.9
BolC2t11445H Brassica oleracea HOM05D000614 ORTHO05D000463 3.4e-06 55.5 113 38.9
Sp2g16260 Schrenkiella parvula HOM05D000614 ORTHO05D000463 3.4e-06 55.5 113 37.2
AT3G27150 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 4.5e-06 55.1 113 38.1
C02p53760 Brassica napus HOM05D000614 ORTHO05D000463 4.5e-06 55.1 113 39.8
Aa31LG2G5480 Aethionema arabicum HOM05D000614 ORTHO05D007818 5.8e-06 54.7 107 39.3
AL5G16260 Arabidopsis lyrata HOM05D000614 ORTHO05D000463 7.6e-06 54.3 114 37.7
BcaB03g12205 Brassica carinata HOM05D000614 ORTHO05D000463 7.6e-06 54.3 99 38.4
Thhalv10005262m.g Eutrema salsugineum HOM05D000614 ORTHO05D000463 7.6e-06 54.3 91 41.8
BraA02t08518Z Brassica rapa HOM05D000614 ORTHO05D000463 1.0e-05 53.9 113 38.1


User provided reference genes

Program Settings