Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26389H Brassica oleracea HOM05D001224 ORTHO05D028247 3.2e-34 147.9 76 100.0
C05p42020 Brassica napus HOM05D001224 ORTHO05D028247 2.0e-33 145.2 76 98.7
BolC5t31763H Brassica oleracea HOM05D001224 ORTHO05D028247 7.8e-33 143.3 76 97.4
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 6.2e-30 133.7 97 77.3
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 4.0e-29 131.0 97 76.3
BolC1t03176H Brassica oleracea HOM05D001224 ORTHO05D010571 7.5e-28 126.7 94 74.5
BraA06t25344Z Brassica rapa HOM05D001224 ORTHO05D028247 7.8e-25 116.7 77 83.1
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.1e-21 106.3 84 72.6
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 8.9e-21 103.2 84 71.4
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 2.0e-20 102.1 79 73.4
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 5.8e-20 100.5 79 72.2
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 1.7e-19 99.0 77 72.7
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 1.7e-19 99.0 79 70.9
C05p27310 Brassica napus HOM05D001224 ORTHO05D010571 1.7e-19 99.0 77 72.7
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 1.7e-19 99.0 77 72.7
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 3.7e-19 97.8 84 69.0
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 3.7e-19 97.8 81 69.1
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 3.7e-19 97.8 77 71.4
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 4.9e-19 97.4 78 71.8
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 4.9e-19 97.4 76 72.4
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 4.9e-19 97.4 78 71.8
C07p01180 Brassica napus HOM05D001224 ORTHO05D010571 6.4e-19 97.1 62 85.5
BolC8t49589H Brassica oleracea HOM05D001224 ORTHO05D010571 6.4e-19 97.1 77 71.4
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 8.3e-19 96.7 77 71.4
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 1.1e-18 96.3 77 71.4
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 1.1e-18 96.3 77 71.4
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 1.4e-18 95.9 84 67.9
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 3.2e-18 94.7 84 70.2
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 3.2e-18 94.7 77 70.1
BolC4t25341H Brassica oleracea HOM05D001224 ORTHO05D010571 3.2e-18 94.7 77 70.1
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 4.1e-18 94.4 79 69.6
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 9.2e-18 93.2 71 78.9
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-17 92.8 77 70.1
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.2e-17 92.8 77 70.1
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 2.1e-17 92.0 77 68.8
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 1.0e-16 89.7 77 68.8
C07p08950 Brassica napus HOM05D001224 ORTHO05D042023 1.6e-14 82.4 76 64.5
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.1e-13 79.7 63 74.6
BraA03t15284Z Brassica rapa HOM05D001224 ORTHO05D042023 1.1e-13 79.7 76 63.2
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 4.4e-12 74.3 36 100.0
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 7.6e-12 73.6 39 92.3
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-11 72.8 64 60.9
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-11 72.8 35 100.0
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 2.9e-11 71.6 88 51.1
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 4.9e-11 70.9 85 50.6
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 4.9e-11 70.9 60 66.7
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 8.4e-11 70.1 91 48.4
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 8.4e-11 70.1 51 76.5
C04p35170 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-10 69.7 64 59.4
BcaC02g09920 Brassica carinata HOM05D001224 ORTHO05D014478 1.4e-10 69.3 63 61.9
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 1.4e-10 69.3 64 60.9
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 1.4e-10 69.3 60 65.0
BcaC02g11120 Brassica carinata HOM05D001224 ORTHO05D010571 3.2e-10 68.2 39 87.2
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 4.1e-10 67.8 36 91.7
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 7.1e-10 67.0 59 66.1
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 3.9e-08 61.2 48 75.0
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 9.6e-07 56.6 91 41.8
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 2.1e-06 55.5 37 81.1
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 3.6e-06 54.7 71 47.9
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 4.7e-06 54.3 78 43.6


User provided reference genes

Program Settings