Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 3.1e-148 528.5 277 100.0
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 1.7e-125 453.0 237 99.2
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 2.4e-124 449.1 237 97.9
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 2.4e-124 449.1 237 97.9
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 9.6e-97 357.5 237 79.3
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 2.2e-93 346.3 215 83.3
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 1.4e-79 300.4 237 68.4
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 6.9e-79 298.1 240 66.7
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 4.5e-78 295.4 249 64.3
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 1.7e-77 293.5 248 60.9
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 4.5e-70 268.9 152 92.1
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 6.7e-66 255.0 248 59.3
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 2.7e-59 233.0 243 53.5
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 5.3e-55 218.8 244 51.2
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 5.3e-55 218.8 249 53.0
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 2.0e-54 216.9 240 50.8
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 2.9e-53 213.0 246 52.0
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 2.5e-52 209.9 243 49.8
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 1.0e-50 204.5 274 46.7
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 2.3e-50 203.4 250 48.8
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 3.9e-50 202.6 237 50.6
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 2.0e-49 200.3 237 50.2
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 1.4e-47 194.1 244 45.1
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 1.5e-46 190.7 242 47.1
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 2.0e-33 147.1 290 34.8
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 2.4e-31 140.2 292 34.9
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 1.6e-30 137.5 132 52.3
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 2.0e-30 137.1 316 33.5
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 3.5e-30 136.3 293 33.4
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 1.0e-29 134.8 282 33.3
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 1.3e-29 134.4 288 34.4
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 1.3e-29 134.4 282 33.3
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 2.2e-29 133.7 254 35.4
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 3.8e-29 132.9 310 32.6
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 5.0e-29 132.5 282 33.3
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 8.5e-29 131.7 261 36.8
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 3.2e-28 129.8 262 33.2
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 5.5e-28 129.0 278 31.7
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 3.6e-27 126.3 358 30.7
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 4.7e-27 125.9 262 31.7
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 4.7e-27 125.9 279 33.3
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 1.0e-26 124.8 295 30.8
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.4e-26 124.4 277 34.3
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 1.4e-26 124.4 313 32.3
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 4.0e-26 122.9 238 35.3
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 5.2e-26 122.5 305 31.8
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 8.8e-26 121.7 274 33.6
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 1.2e-25 121.3 272 32.4
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 1.2e-25 121.3 289 29.4
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 2.0e-25 120.6 271 32.5
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.6e-25 120.2 253 35.2
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 5.7e-25 119.0 298 31.2
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 7.5e-25 118.6 279 31.9
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 7.5e-25 118.6 125 47.2
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 7.5e-25 118.6 277 33.9
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 9.8e-25 118.2 296 32.8
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 1.3e-24 117.9 232 34.9
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 3.7e-24 116.3 307 30.0
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 3.7e-24 116.3 225 33.3
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 3.7e-24 116.3 278 30.6
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 4.8e-24 115.9 280 30.0
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 4.8e-24 115.9 301 32.6
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 6.3e-24 115.5 257 34.6
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 6.3e-24 115.5 266 29.7
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 1.8e-23 114.0 128 46.1
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 2.4e-23 113.6 280 32.1
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 9.1e-23 111.7 264 29.9
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 1.6e-22 110.9 292 30.1
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 2.7e-22 110.2 322 29.2
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 3.5e-22 109.8 280 32.1
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 5.9e-22 109.0 264 31.4
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.7e-21 107.5 125 43.2
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 2.9e-21 106.7 273 30.4
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 3.8e-21 106.3 297 29.6
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 1.1e-20 104.8 295 27.8
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 1.1e-20 104.8 152 39.5
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 1.9e-20 104.0 103 49.5
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 3.2e-20 103.2 145 36.6
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 4.2e-20 102.8 328 28.7
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 5.5e-20 102.4 140 39.3
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 9.5e-20 101.7 154 36.4
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 3.6e-19 99.8 123 40.7
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 3.6e-19 99.8 257 31.1
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 1.4e-18 97.8 118 44.1
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.8e-18 97.4 323 29.1
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 1.8e-18 97.4 128 39.8
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.0e-18 96.7 127 41.7
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 4.0e-18 96.3 125 40.8
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 6.8e-18 95.5 125 42.4
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 6.8e-18 95.5 125 42.4
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.2e-17 94.7 326 25.8
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 5.7e-17 92.4 331 24.8
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 1.3e-16 91.3 358 28.2
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 2.8e-16 90.1 193 30.6
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 1.1e-15 88.2 315 27.0
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 2.4e-15 87.0 105 42.9
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 2.0e-14 84.0 125 36.0
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 4.5e-14 82.8 125 35.2
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 2.9e-13 80.1 238 30.3
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.5e-12 77.0 71 53.5
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 7.3e-12 75.5 127 33.1
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 4.7e-11 72.8 139 32.4
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 3.0e-10 70.1 125 34.4
BcaC06g30992 Brassica carinata HOM05D000131 ORTHO05D008778 6.8e-10 68.9 81 46.9
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 4.4e-09 66.2 154 27.3
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 2.2e-08 63.9 98 36.7
Pp3c22_7000 Physcomitrium patens HOM05D000336 ORTHO05D002705 8.3e-08 62.0 119 37.0
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 8.3e-08 62.0 206 26.7
SEGI_16878 Sequoiadendron giganteum HOM05D000336 ORTHO05D002705 1.4e-07 61.2 92 35.9
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 2.0e-06 57.4 64 45.3
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 5.9e-06 55.8 64 45.3


User provided reference genes

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