Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26309H Brassica oleracea HOM05D007751 ORTHO05D009813 1.5e-38 162.5 90 100.0
C04p47120 Brassica napus HOM05D007751 ORTHO05D009813 5.6e-30 134.0 74 100.0
BolC4t26306H Brassica oleracea HOM05D007751 ORTHO05D009813 5.6e-30 134.0 74 100.0
A04p13370 Brassica napus HOM05D007751 ORTHO05D009813 1.6e-29 132.5 74 98.6
BraA04t16992Z Brassica rapa HOM05D007751 ORTHO05D009813 2.8e-29 131.7 74 98.6
Sp6g11910 Schrenkiella parvula HOM05D007751 ORTHO05D009813 5.2e-20 100.9 74 77.0
Thhalv10015309m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 3.4e-19 98.2 71 81.7
Sp6g11880 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.4e-17 92.0 73 68.5
C03p33340 Brassica napus HOM05D007751 ORTHO05D009813 3.5e-16 88.2 73 65.8
BcaC01g04833 Brassica carinata HOM05D007751 ORTHO05D009813 1.3e-15 86.3 73 64.4
BraA03t10746Z Brassica rapa HOM05D007751 ORTHO05D009813 3.9e-15 84.7 73 64.4
BcaB01g04307 Brassica carinata HOM05D007751 ORTHO05D009813 2.5e-14 82.0 73 61.6
BcaC01g06316 Brassica carinata HOM05D007751 ORTHO05D009813 2.5e-14 82.0 73 61.6
BolC3t14109H Brassica oleracea HOM05D007751 ORTHO05D009813 2.5e-14 82.0 73 61.6
C03p16960 Brassica napus HOM05D007751 ORTHO05D009813 4.3e-14 81.3 73 61.6
A03p14510 Brassica napus HOM05D007751 ORTHO05D009813 5.6e-14 80.9 73 61.6
Sp6g11920 Schrenkiella parvula HOM05D007751 ORTHO05D009813 2.8e-13 78.6 77 63.6
AT5G50040 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.4e-12 76.3 74 66.2
Carub.0008s0995 Capsella rubella HOM05D007751 ORTHO05D009813 1.8e-12 75.9 76 68.4
AT5G50050 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.6e-11 72.0 76 63.2
Carub.0008s0997 Capsella rubella HOM05D007751 ORTHO05D009813 5.8e-11 70.9 74 62.2
CARHR257930 Cardamine hirsuta HOM05D007751 ORTHO05D009813 5.8e-11 70.9 68 63.2
Carub.0008s0996 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-10 69.7 76 61.8
Carub.0008s0998 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-10 69.7 76 64.5
Carub.0008s1000 Capsella rubella HOM05D007751 ORTHO05D009813 1.3e-10 69.7 75 65.3
CARHR258610 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.3e-10 69.7 74 62.2
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 4.9e-10 67.8 77 57.1
AL8G24040 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.4e-10 67.4 78 61.5
Carub.0008s0999 Capsella rubella HOM05D007751 ORTHO05D009813 8.4e-10 67.0 75 62.7
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 1.9e-09 65.9 75 58.7
Thhalv10014776m.g Eutrema salsugineum HOM05D007751 ORTHO05D009813 9.3e-09 63.5 77 50.6
AT5G50030 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 2.1e-08 62.4 76 51.3
Carub.0008s0994 Capsella rubella HOM05D007751 ORTHO05D009813 3.5e-08 61.6 75 52.0
AL8G24030 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 6.0e-08 60.8 76 50.0
CARHR258630 Cardamine hirsuta HOM05D007751 ORTHO05D009813 7.8e-08 60.5 76 52.6
Sp6g11860 Schrenkiella parvula HOM05D007751 ORTHO05D009813 1.3e-07 59.7 77 49.4
CARHR284460 Cardamine hirsuta HOM05D007751 ORTHO05D009813 1.1e-06 56.6 80 47.5
AT5G50060 Arabidopsis thaliana HOM05D007751 ORTHO05D009813 1.5e-06 56.2 67 47.8
Carub.0008s1001 Capsella rubella HOM05D007751 ORTHO05D009813 3.3e-06 55.1 80 46.2
Aa31sc47G80 Aethionema arabicum HOM05D007751 ORTHO05D009813 7.3e-06 53.9 49 57.1
AL8G24050 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 9.6e-06 53.5 67 47.8


User provided reference genes

Program Settings