Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10498 Brassica carinata HOM05D012926 ORTHO05D015502 6.1e-55 217.2 110 100.0
BolC4t24366H Brassica oleracea HOM05D012926 ORTHO05D015502 6.1e-55 217.2 110 100.0
BcaC02g10064 Brassica carinata HOM05D012926 ORTHO05D015502 5.9e-50 200.7 108 95.4
BolC4t24888H Brassica oleracea HOM05D012926 ORTHO05D015502 2.9e-49 198.4 110 93.6
C04p33250 Brassica napus HOM05D012926 ORTHO05D015502 2.0e-45 185.7 132 78.0
C04p28200 Brassica napus HOM05D012926 ORTHO05D015502 4.4e-45 184.5 92 100.0
C09p22140 Brassica napus HOM05D012926 ORTHO05D015502 2.5e-32 142.1 90 84.4
BolC9t55128H Brassica oleracea HOM05D012926 ORTHO05D015502 3.3e-32 141.7 90 84.4
BraA10t42577Z Brassica rapa HOM05D012926 ORTHO05D015502 3.0e-25 118.6 92 71.7
BcaC04g21937 Brassica carinata HOM05D012926 ORTHO05D015502 7.3e-16 87.4 47 87.2
Thhalv10006040m.g Eutrema salsugineum HOM05D000194 ORTHO05D000069 2.8e-15 85.5 98 57.1
Sp5g04890 Schrenkiella parvula HOM05D000194 ORTHO05D000069 6.2e-15 84.3 89 57.3
BcaC08g44869 Brassica carinata HOM05D000194 ORTHO05D000069 1.4e-14 83.2 83 62.7
C06p24830 Brassica napus HOM05D000194 ORTHO05D000069 1.4e-14 83.2 83 62.7
BcaC08g43577 Brassica carinata HOM05D012926 ORTHO05D015502 2.4e-14 82.4 50 76.0
Carub.0005s2466 Capsella rubella HOM05D000194 ORTHO05D000069 1.2e-13 80.1 98 54.1
BolC6t37636H Brassica oleracea HOM05D000194 ORTHO05D000069 1.5e-13 79.7 83 61.4
AL5G39470 Arabidopsis lyrata HOM05D000194 ORTHO05D000069 2.6e-13 79.0 98 52.0
AT3G57800 Arabidopsis thaliana HOM05D000194 ORTHO05D000069 5.8e-13 77.8 86 60.5
Aa31LG10G12540 Aethionema arabicum HOM05D000194 ORTHO05D000069 1.7e-12 76.3 97 51.5
A07p23690 Brassica napus HOM05D000194 ORTHO05D000069 2.9e-12 75.5 97 51.5
A04p02900 Brassica napus HOM05D000194 ORTHO05D000069 4.9e-12 74.7 97 48.5
BraA04t16013Z Brassica rapa HOM05D000194 ORTHO05D000069 4.9e-12 74.7 97 48.5
BcaC02g12037 Brassica carinata HOM05D012926 ORTHO05D015502 1.1e-11 73.6 53 67.9
CARHR168130 Cardamine hirsuta HOM05D000194 ORTHO05D000069 1.4e-11 73.2 86 58.1
BcaB02g08293 Brassica carinata HOM05D000194 ORTHO05D000069 3.2e-11 72.0 78 56.4
BraA07t30021Z Brassica rapa HOM05D000194 ORTHO05D000069 3.2e-11 72.0 97 49.5
BcaC02g09962 Brassica carinata HOM05D000194 ORTHO05D000069 2.1e-10 69.3 76 53.9
C04p34560 Brassica napus HOM05D000194 ORTHO05D000069 2.1e-10 69.3 76 53.9
BolC4t25017H Brassica oleracea HOM05D000194 ORTHO05D000069 2.1e-10 69.3 76 53.9
BcaB02g07572 Brassica carinata HOM05D000194 ORTHO05D000069 2.3e-09 65.9 82 52.4
BcaC07g40337 Brassica carinata HOM05D000194 ORTHO05D000069 3.3e-08 62.0 79 50.6
C08p33390 Brassica napus HOM05D000194 ORTHO05D000069 3.3e-08 62.0 79 50.6
BolC8t50938H Brassica oleracea HOM05D000194 ORTHO05D000069 3.3e-08 62.0 79 50.6
BraA09t40517Z Brassica rapa HOM05D000194 ORTHO05D000069 9.6e-08 60.5 77 50.6
BcaB05g24590 Brassica carinata HOM05D012926 ORTHO05D093936 1.3e-07 60.1 71 46.5
A09p50690 Brassica napus HOM05D000194 ORTHO05D000069 1.6e-07 59.7 77 50.6
BcaC03g16795 Brassica carinata HOM05D025113 ORTHO05D094679 4.8e-07 58.2 61 54.1
AL4G40660 Arabidopsis lyrata HOM05D000194 ORTHO05D000069 1.4e-06 56.6 98 43.9
CARHR137340 Cardamine hirsuta HOM05D000194 ORTHO05D000069 9.0e-06 53.9 98 45.9


User provided reference genes

Program Settings