Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t24331H Brassica oleracea HOM05D000017 ORTHO05D000013 3.7e-47 191.0 87 100.0
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-42 173.7 87 87.4
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 6.1e-42 173.7 87 87.4
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-41 172.2 87 85.1
BolC4t25142H Brassica oleracea HOM05D000017 ORTHO05D000013 1.8e-41 172.2 87 88.5
A05p09870 Brassica napus HOM05D000017 ORTHO05D000013 6.0e-37 157.1 87 79.3
A05p25800 Brassica napus HOM05D000017 ORTHO05D000013 6.0e-37 157.1 87 79.3
A09p29980 Brassica napus HOM05D000017 ORTHO05D000013 6.0e-37 157.1 87 79.3
BraA09t38561Z Brassica rapa HOM05D000017 ORTHO05D000013 9.5e-35 149.8 95 72.6
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 2.2e-31 138.7 87 64.4
C03p60170 Brassica napus HOM05D000017 ORTHO05D015524 1.4e-30 136.0 84 67.9
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 2.8e-26 121.7 54 94.4
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 1.4e-25 119.4 54 90.7
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 1.5e-24 115.9 54 88.9
BraA07t28119Z Brassica rapa HOM05D000017 ORTHO05D000013 3.7e-23 111.3 54 85.2
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 2.8e-18 95.1 87 46.0
BraA05t21217Z Brassica rapa HOM05D000017 ORTHO05D000013 2.8e-18 95.1 87 46.0
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-17 92.4 87 46.0
BraA08t32812Z Brassica rapa HOM05D000017 ORTHO05D000013 3.1e-17 91.7 84 45.2
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 7.6e-16 87.0 87 41.4
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 2.7e-13 78.6 63 54.0
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 6.0e-13 77.4 63 50.8
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 1.7e-12 75.9 71 46.5
C02p39170 Brassica napus HOM05D006142 ORTHO05D000013 1.7e-12 75.9 68 48.5
C06p09170 Brassica napus HOM05D006142 ORTHO05D000013 3.0e-12 75.1 63 50.8
Thhalv10010932m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 3.9e-12 74.7 84 39.3
C02p54970 Brassica napus HOM05D006142 ORTHO05D000013 4.3e-11 71.2 65 47.7
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 4.3e-11 71.2 61 49.2
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 9.9e-08 60.1 52 46.2
CANSAT11G1763 Cannabis sativa HOM05D000017 ORTHO05D000013 1.3e-07 59.7 75 36.0
Thhalv10002279m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.7e-07 59.3 49 40.8
Thhalv10002182m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 2.9e-07 58.5 72 34.7
Thhalv10027116m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 4.9e-07 57.8 49 38.8
THA.LOC104825417 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 8.4e-07 57.0 80 35.0
BraA06t26007Z Brassica rapa HOM05D000017 ORTHO05D000013 1.1e-06 56.6 58 41.4
TAR423G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 1.1e-06 56.6 87 27.6
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 1.4e-06 56.2 84 33.3
PSO675G3510 Papaver somniferum HOM05D000017 ORTHO05D000013 1.4e-06 56.2 59 35.6
CANSAT01G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-06 55.8 59 42.4
CANSAT11G2678 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-06 55.8 59 42.4
CANSAT80G1346 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-06 55.8 59 40.7
PSO339G5683 Papaver somniferum HOM05D000017 ORTHO05D000013 1.9e-06 55.8 59 35.6
PSO478G2058 Papaver somniferum HOM05D000017 ORTHO05D000013 1.9e-06 55.8 59 35.6
PSO384G3602 Papaver somniferum HOM05D000017 ORTHO05D000013 2.4e-06 55.5 59 35.6
PSO478G1230 Papaver somniferum HOM05D000017 ORTHO05D000013 2.4e-06 55.5 59 35.6
PSO541G2885 Papaver somniferum HOM05D000017 ORTHO05D000013 2.4e-06 55.5 59 35.6
PSO724G0349 Papaver somniferum HOM05D000017 ORTHO05D000013 2.4e-06 55.5 59 35.6
PSO478G2776 Papaver somniferum HOM05D000017 ORTHO05D000013 3.2e-06 55.1 59 35.6
BolC9t55669H Brassica oleracea HOM05D008389 ORTHO05D010630 4.2e-06 54.7 73 39.7
PSO478G4719 Papaver somniferum HOM05D000017 ORTHO05D000013 4.2e-06 54.7 59 35.6
TAR511G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 4.2e-06 54.7 86 26.7
Thhalv10029395m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 5.4e-06 54.3 87 31.0
Oeu044755.1 Olea europaea HOM05D000017 ORTHO05D000013 5.4e-06 54.3 87 32.2
PSO729G0078 Papaver somniferum HOM05D000017 ORTHO05D000013 5.4e-06 54.3 51 39.2
Atru.chr1.3834 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-06 53.9 66 36.4
Atru.chr7.1109 Acer truncatum HOM05D000017 ORTHO05D000013 7.1e-06 53.9 66 36.4
CANSAT01G0145 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-06 53.9 53 41.5
CANSAT35G0343 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-06 53.9 59 40.7
CANSAT78G2173 Cannabis sativa HOM05D000017 ORTHO05D000013 7.1e-06 53.9 59 40.7
TAR239G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 7.1e-06 53.9 83 27.7
CANSAT11G1886 Cannabis sativa HOM05D000017 ORTHO05D000013 9.3e-06 53.5 55 40.0
CANSAT80G0590 Cannabis sativa HOM05D000017 ORTHO05D000013 9.3e-06 53.5 53 41.5
PSO782G2651 Papaver somniferum HOM05D000017 ORTHO05D000013 9.3e-06 53.5 59 33.9


User provided reference genes

Program Settings