Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 3.1e-63 245.0 123 100.0
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 2.0e-62 242.3 123 98.4
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 2.0e-62 242.3 123 98.4
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-62 241.9 123 98.4
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-62 241.9 123 98.4
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-62 241.9 123 98.4
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 2.6e-62 241.9 123 98.4
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 2.6e-62 241.9 123 98.4
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 6.6e-58 227.3 123 88.6
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 6.6e-58 227.3 123 88.6
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 3.3e-57 224.9 123 87.8
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 3.3e-57 224.9 123 88.6
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 5.6e-57 224.2 123 91.1
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 2.1e-56 222.2 123 87.0
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 8.1e-56 220.3 123 90.2
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 3.1e-55 218.4 123 85.4
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 3.1e-55 218.4 123 85.4
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 2.9e-53 211.8 123 86.2
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 4.9e-53 211.1 124 86.3
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 7.1e-52 207.2 115 90.4
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 7.8e-51 203.8 119 84.9
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 6.0e-43 177.6 123 76.4
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 1.4e-36 156.4 121 62.8
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 2.5e-25 119.0 123 51.2
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 3.3e-25 118.6 124 51.6
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 3.3e-25 118.6 123 51.2
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 5.7e-25 117.9 129 52.7
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 9.7e-25 117.1 121 52.1
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 3.7e-24 115.2 127 50.4
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 4.8e-24 114.8 125 48.0
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 8.2e-24 114.0 126 50.0
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.1e-23 113.6 123 48.8
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 1.1e-23 113.6 125 51.2
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 1.4e-23 113.2 126 50.8
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.4e-23 112.5 123 48.8
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 2.4e-23 112.5 123 48.8
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 2.4e-23 112.5 123 50.4
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.4e-23 112.5 125 50.4
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 2.4e-23 112.5 131 48.9
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 4.1e-23 111.7 130 50.0
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 4.1e-23 111.7 123 51.2
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 4.1e-23 111.7 130 50.0
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 4.1e-23 111.7 128 48.4
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 5.3e-23 111.3 121 52.1
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 5.3e-23 111.3 127 49.6
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 5.3e-23 111.3 125 51.2
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 6.9e-23 110.9 129 46.5
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 6.9e-23 110.9 129 45.7
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 9.0e-23 110.5 129 50.4
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 9.0e-23 110.5 125 49.6
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.2e-22 110.2 125 49.6
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.5e-22 109.8 121 50.4
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 3.4e-22 108.6 125 48.8
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 4.5e-22 108.2 128 49.2
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 7.6e-22 107.5 129 44.2
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 7.6e-22 107.5 131 47.3
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 1.0e-21 107.1 128 49.2
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 1.0e-21 107.1 126 48.4
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 1.7e-21 106.3 128 48.4
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 1.7e-21 106.3 128 48.4
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 1.7e-21 106.3 129 48.1
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 1.7e-21 106.3 132 47.7
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 1.7e-21 106.3 132 47.7
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.7e-21 106.3 121 52.1
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 1.7e-21 106.3 129 43.4
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 2.2e-21 105.9 130 46.9
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 3.8e-21 105.1 136 43.4
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 5.0e-21 104.8 128 46.1
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 5.0e-21 104.8 126 48.4
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 8.5e-21 104.0 138 43.5
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 8.5e-21 104.0 133 43.6
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.1e-20 103.6 123 48.0
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.1e-20 103.6 123 48.0
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 1.1e-20 103.6 133 44.4
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 1.1e-20 103.6 128 46.1
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 1.4e-20 103.2 129 44.2
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.4e-20 103.2 134 45.5
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 1.4e-20 103.2 129 46.5
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.4e-20 103.2 123 48.0
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 1.9e-20 102.8 117 46.2
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 2.5e-20 102.4 129 46.5
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.5e-20 102.4 129 46.5
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 3.2e-20 102.1 114 50.0
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 5.5e-20 101.3 134 41.0
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 7.2e-20 100.9 123 48.0
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 9.3e-20 100.5 135 43.0
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 9.3e-20 100.5 129 45.7
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 9.3e-20 100.5 137 44.5
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.2e-19 100.1 130 40.8
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 1.6e-19 99.8 136 44.1
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 2.1e-19 99.4 135 40.7
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 2.1e-19 99.4 128 45.3
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.7e-19 99.0 111 50.5
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 3.6e-19 98.6 128 43.8
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 6.1e-19 97.8 104 46.2
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 6.1e-19 97.8 131 42.7
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 7.9e-19 97.4 108 50.0
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 1.4e-18 96.7 92 53.3
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 1.8e-18 96.3 127 43.3
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 3.0e-18 95.5 126 41.3
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 3.9e-18 95.1 129 41.1
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 1.5e-17 93.2 118 45.8
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 1.5e-17 93.2 118 47.5
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.5e-17 93.2 108 47.2
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 1.7e-16 89.7 128 42.2
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.8e-15 86.3 129 40.3
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 2.4e-15 85.9 143 38.5
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 2.0e-14 82.8 138 39.1
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 2.6e-14 82.4 144 35.4
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 3.8e-13 78.6 118 39.0
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 8.5e-13 77.4 120 39.2
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 9.4e-12 73.9 118 40.7
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 9.4e-12 73.9 117 39.3
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 1.2e-11 73.6 102 44.1
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 1.4e-10 70.1 78 50.0
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 3.0e-10 68.9 123 39.8
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 8.8e-10 67.4 97 39.2
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 1.1e-09 67.0 126 37.3
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 7.4e-09 64.3 77 44.2
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 3.4e-06 55.5 121 35.5


User provided reference genes

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