Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 1.1e-55 219.5 102 100.0
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 5.7e-55 217.2 102 99.0
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-53 213.0 100 98.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 5.3e-53 210.7 102 98.0
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 7.5e-39 163.7 102 75.5
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 9.7e-39 163.3 103 77.7
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.0e-35 153.3 97 73.2
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 3.8e-35 151.4 103 73.8
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 6.5e-35 150.6 102 67.6
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 6.5e-35 150.6 102 67.6
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 8.5e-35 150.2 103 70.9
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-34 149.8 103 72.8
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-34 149.8 103 72.8
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 7.2e-34 147.1 103 68.9
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-32 142.9 100 68.0
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-31 139.8 92 69.6
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-31 139.8 92 69.6
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-31 139.8 92 69.6
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.6e-31 138.7 90 66.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 4.4e-31 137.9 102 65.7
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 4.4e-31 137.9 102 65.7
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 4.4e-31 137.9 91 65.9
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 5.7e-31 137.5 102 66.7
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.7e-30 136.0 97 63.9
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-30 136.0 91 65.9
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 3.7e-30 134.8 88 68.2
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 3.7e-30 134.8 88 68.2
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 3.7e-30 134.8 88 68.2
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-30 134.4 89 64.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 4.8e-30 134.4 102 64.7
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 8.3e-30 133.7 94 63.8
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.4e-29 132.9 97 61.9
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-29 132.9 101 62.4
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-29 132.9 107 62.6
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-29 132.9 89 62.9
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 1.8e-29 132.5 78 73.1
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.8e-29 132.5 99 67.7
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.1e-29 131.7 87 69.0
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.1e-29 131.7 85 63.5
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 4.1e-29 131.3 75 73.3
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.4e-29 131.0 90 64.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 5.4e-29 131.0 89 66.3
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 5.4e-29 131.0 91 64.8
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 5.4e-29 131.0 91 64.8
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-28 129.8 107 60.7
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.2e-28 129.8 92 65.2
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.6e-28 129.4 85 61.2
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.7e-28 128.6 89 60.7
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.7e-28 128.6 89 60.7
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 3.5e-28 128.3 92 66.3
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.5e-28 127.9 90 66.7
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 4.5e-28 127.9 97 63.9
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 5.9e-28 127.5 85 63.5
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.9e-28 127.5 92 60.9
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.3e-27 125.6 97 59.8
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 3.8e-27 124.8 89 64.0
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.0e-27 124.4 92 66.3
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 6.5e-27 124.0 98 62.2
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.5e-26 122.9 102 56.9
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.5e-26 122.9 90 61.1
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.6e-25 119.4 95 61.1
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-25 117.9 89 64.0
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-24 116.7 99 60.6
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-24 116.7 75 69.3
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.0e-24 116.7 95 57.9
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.4e-24 116.3 65 72.3
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-24 116.3 91 59.3
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.3e-24 115.5 91 60.4
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.8e-24 114.0 91 58.2
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.9e-24 113.6 96 51.0
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.4e-23 111.3 70 75.7
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 4.4e-23 111.3 92 59.8
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 7.5e-23 110.5 72 72.2
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.5e-23 110.5 91 61.5
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 8.3e-22 107.1 92 55.4
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-21 106.7 78 56.4
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.4e-21 105.5 91 57.1
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.1e-21 105.1 90 57.8
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.3e-19 99.0 96 47.9
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 3.0e-16 88.6 95 49.5
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.0e-16 88.2 89 48.3
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 2.6e-15 85.5 87 44.8
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 2.6e-15 85.5 87 43.7
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 4.4e-15 84.7 84 45.2
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 5.8e-15 84.3 86 44.2
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 5.8e-15 84.3 87 43.7
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 5.8e-15 84.3 87 43.7
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 7.5e-15 84.0 87 43.7
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 7.5e-15 84.0 87 43.7
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 1.3e-14 83.2 86 41.9
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.7e-14 82.8 87 42.5
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 2.2e-14 82.4 94 48.9
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 2.2e-14 82.4 86 44.2
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 4.9e-14 81.3 94 47.9
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 4.9e-14 81.3 88 47.7
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 4.9e-14 81.3 88 47.7
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 8.3e-14 80.5 91 48.4
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-13 79.7 92 48.9
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.8e-13 79.3 86 41.9
CARHR123510 Cardamine hirsuta HOM05D014590 ORTHO05D017585 2.4e-13 79.0 90 52.2
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 9.2e-13 77.0 88 46.6
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 2.0e-12 75.9 95 44.2
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 6.0e-12 74.3 92 43.5
A04p02110 Brassica napus HOM05D014590 ORTHO05D017585 1.1e-10 70.1 89 42.7
BraA04t15937Z Brassica rapa HOM05D014590 ORTHO05D017585 1.1e-10 70.1 89 42.7
BcaC02g10070 Brassica carinata HOM05D014590 ORTHO05D017585 7.3e-10 67.4 82 41.5
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 1.6e-09 66.2 88 37.5
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 1.6e-09 66.2 88 37.5
Carub.0005s2631 Capsella rubella HOM05D014590 ORTHO05D017585 4.7e-09 64.7 91 40.7


User provided reference genes

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