Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC2t08091H Brassica oleracea HOM05D002831 ORTHO05D004341 1.6e-51 206.1 124 100.0
BNapus_Darmor_BZH_scaffold_232p00070 Brassica napus HOM05D002831 ORTHO05D004341 3.3e-49 198.4 122 96.7
BcaC03g14518 Brassica carinata HOM05D002831 ORTHO05D004341 5.3e-47 191.0 122 93.4
A02p11720 Brassica napus HOM05D002831 ORTHO05D004341 1.7e-45 186.0 122 91.8
BraA02t06237Z Brassica rapa HOM05D002831 ORTHO05D004341 2.3e-42 175.6 123 91.1
Aa31LG3G8920 Aethionema arabicum HOM05D002831 ORTHO05D004341 2.6e-25 119.0 124 68.5
AT5G52550 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 2.2e-24 115.9 124 67.7
AL8G27020 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 2.9e-21 105.5 121 67.8
BcaB05g21966 Brassica carinata HOM05D002831 ORTHO05D004341 1.0e-18 97.1 115 64.3
C02p19540 Brassica napus HOM05D002831 ORTHO05D004341 2.3e-18 95.9 59 94.9
CARHR265540 Cardamine hirsuta HOM05D002831 ORTHO05D004341 4.0e-18 95.1 127 57.5
Carub.0008s1268 Capsella rubella HOM05D002831 ORTHO05D004341 4.4e-17 91.7 125 60.0
A01p16930 Brassica napus HOM05D002831 ORTHO05D004341 9.8e-17 90.5 157 49.7
THA.LOC104800271 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 7.0e-15 84.3 111 60.4
C01p21210 Brassica napus HOM05D002831 ORTHO05D004341 1.7e-13 79.7 156 47.4
THA.LOC104811959 Tarenaya hassleriana HOM05D002831 ORTHO05D004341 9.4e-12 73.9 110 56.4
Nn1g01625 Nelumbo nucifera HOM05D002831 ORTHO05D004341 5.7e-09 64.7 130 46.9
BraA01t01648Z Brassica rapa HOM05D002831 ORTHO05D004341 4.9e-08 61.6 69 66.7
ATR0661G020 Amborella trichopoda HOM05D002831 ORTHO05D004341 6.3e-08 61.2 59 72.9
AL7G27410 Arabidopsis lyrata HOM05D002831 ORTHO05D004341 1.1e-07 60.5 69 66.7
C07p54490 Brassica napus HOM05D000048 ORTHO05D000445 1.1e-07 60.5 69 63.8
BolC7t45934H Brassica oleracea HOM05D000048 ORTHO05D000445 1.1e-07 60.5 69 63.8
Carub.0007s1527 Capsella rubella HOM05D002831 ORTHO05D004341 1.1e-07 60.5 69 65.2
Oeu060465.1 Olea europaea HOM05D002831 ORTHO05D004341 1.1e-07 60.5 50 72.0
PSO478G4817 Papaver somniferum HOM05D002831 ORTHO05D004341 1.1e-07 60.5 68 66.2
PSO782G2858 Papaver somniferum HOM05D002831 ORTHO05D004341 1.1e-07 60.5 68 66.2
Thhalv10027473m.g Eutrema salsugineum HOM05D002831 ORTHO05D004341 1.8e-07 59.7 50 74.0
BolC1t02046H Brassica oleracea HOM05D002831 ORTHO05D004341 7.0e-07 57.8 96 52.1
HPP92_022210 Vanilla planifolia HOM05D002831 ORTHO05D004341 7.0e-07 57.8 59 69.5
HPP92_022231 Vanilla planifolia HOM05D002831 ORTHO05D004341 7.0e-07 57.8 59 69.5
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 9.2e-07 57.4 59 69.5
CSS0004722 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 9.2e-07 57.4 62 69.4
CSS0021117 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D004341 9.2e-07 57.4 62 69.4
AT4G25670 Arabidopsis thaliana HOM05D002831 ORTHO05D004341 1.2e-06 57.0 101 52.5
Lj1P1004T73 Lonicera japonica HOM05D002831 ORTHO05D004341 1.2e-06 57.0 62 69.4
Ah.13g069150 Amaranthus hybridus HOM05D002831 ORTHO05D004341 1.6e-06 56.6 59 67.8
AUR62021127 Chenopodium quinoa HOM05D002831 ORTHO05D004341 1.6e-06 56.6 59 67.8
Eucgr.A02748 Eucalyptus grandis HOM05D002831 ORTHO05D004341 2.0e-06 56.2 66 62.1
HPP92_022228 Vanilla planifolia HOM05D002831 ORTHO05D004341 2.0e-06 56.2 59 67.8
Carub.0007s1530 Capsella rubella HOM05D002831 ORTHO05D004341 2.7e-06 55.8 101 51.5
DCAR_020268 Daucus carota HOM05D002831 ORTHO05D004341 3.5e-06 55.5 62 67.7
AUR62031417 Chenopodium quinoa HOM05D002831 ORTHO05D004341 4.5e-06 55.1 59 66.1
TWI23G0387 Tripterygium wilfordii HOM05D002831 ORTHO05D004341 5.9e-06 54.7 66 63.6
BolC1t02049H Brassica oleracea HOM05D002831 ORTHO05D004341 7.7e-06 54.3 50 72.0
Ciclev10005857m.g Citrus clementina HOM05D002831 ORTHO05D004341 7.7e-06 54.3 47 76.6
Sp7g23710 Schrenkiella parvula HOM05D002831 ORTHO05D004341 7.7e-06 54.3 101 50.5


User provided reference genes

Program Settings