Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC2t08063H Brassica oleracea HOM05D008266 ORTHO05D000062 4.8e-90 334.3 154 100.0
BcaC02g08794 Brassica carinata HOM05D008266 ORTHO05D000062 1.1e-86 323.2 154 96.1
BcaB07g32592 Brassica carinata HOM05D008266 ORTHO05D000062 2.4e-57 225.7 154 61.7
BcaC01g01797 Brassica carinata HOM05D008266 ORTHO05D000062 5.9e-56 221.1 154 61.7
BcaC03g17092 Brassica carinata HOM05D008266 ORTHO05D000062 1.2e-53 213.4 148 61.5
Aa31sc75G50 Aethionema arabicum HOM05D000107 ORTHO05D000062 3.9e-47 191.8 155 54.8
Sp4g06240 Schrenkiella parvula HOM05D008134 ORTHO05D006374 6.6e-47 191.0 155 62.6
BcaC08g44727 Brassica carinata HOM05D008266 ORTHO05D000062 6.4e-42 174.5 125 58.4
BcaB07g30750 Brassica carinata HOM05D008266 ORTHO05D000062 1.9e-41 172.9 125 59.2
BcaC09g48783 Brassica carinata HOM05D008266 ORTHO05D000062 3.2e-41 172.2 80 97.5
BcaC04g18851 Brassica carinata HOM05D008266 ORTHO05D000062 1.2e-40 170.2 125 56.8
BcaC01g03082 Brassica carinata HOM05D008266 ORTHO05D009904 1.6e-40 169.9 138 55.1
BcaC07g39552 Brassica carinata HOM05D008266 ORTHO05D000062 6.0e-40 167.9 125 57.6
BcaC03g17259 Brassica carinata HOM05D008266 ORTHO05D000062 7.8e-40 167.5 138 55.8
BcaC04g20587 Brassica carinata HOM05D008266 ORTHO05D000062 1.0e-39 167.2 124 55.6
BcaC07g37918 Brassica carinata HOM05D008266 ORTHO05D009904 1.2e-37 160.2 125 56.0
BcaB01g00797 Brassica carinata HOM05D008266 ORTHO05D000062 6.8e-36 154.5 103 62.1
Sp1g31350 Schrenkiella parvula HOM05D008266 ORTHO05D000062 1.5e-35 153.3 113 61.1
BcaC01g02221 Brassica carinata HOM05D008266 ORTHO05D009904 2.9e-34 149.1 113 56.6
THA.LOC104825104 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 1.2e-32 143.7 155 37.4
THA.LOC104816687 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.3e-31 139.4 160 34.4
THA.LOC104815415 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 6.6e-31 137.9 160 33.8
BcaC06g35408 Brassica carinata HOM05D008266 ORTHO05D000062 3.3e-30 135.6 131 38.9
THA.LOC104810224 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 4.3e-30 135.2 156 33.3
THA.LOC104810640 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.0e-27 126.3 160 32.5
SpUn0001_0660 Schrenkiella parvula HOM05D007948 ORTHO05D006374 1.9e-25 119.8 86 57.0
SpUn0003_0170 Schrenkiella parvula HOM05D008266 ORTHO05D000062 2.1e-24 116.3 103 60.2
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-22 110.5 156 34.0
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 7.3e-22 107.8 154 33.8
Sp2g13780 Schrenkiella parvula HOM05D008266 ORTHO05D000062 7.3e-22 107.8 72 69.4
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-21 106.7 156 32.7
BcaC01g03173 Brassica carinata HOM05D008266 ORTHO05D000062 3.6e-21 105.5 155 29.0
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 3.6e-21 105.5 156 33.3
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-20 103.2 156 32.1
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-20 101.7 154 31.8
COL.COLO4_29949 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.6e-19 99.4 157 31.8
ECA234G0534 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.6e-19 99.4 152 32.2
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 4.4e-19 98.6 156 31.4
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-19 97.8 138 33.3
COL.COLO4_04360 Corchorus olitorius HOM05D010609 ORTHO05D010911 1.3e-18 97.1 156 30.8
COL.COLO4_16857 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.3e-18 97.1 144 32.6
COL.COLO4_28468 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.3e-18 97.1 146 32.2
THA.LOC104807779 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.7e-18 96.7 119 31.9
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.7e-18 96.7 106 37.7
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.7e-18 96.7 156 26.9
COL.COLO4_19578 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.9e-18 95.9 150 30.7
COL.COLO4_24438 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.9e-18 95.9 157 31.2
TPR.G25746 Trifolium pratense HOM05D000107 ORTHO05D000062 2.9e-18 95.9 157 31.2
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-17 94.0 156 26.9
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-17 94.0 156 26.9
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-17 94.0 156 27.6
COL.COLO4_04723 Corchorus olitorius HOM05D000107 ORTHO05D000062 3.2e-17 92.4 137 32.8
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.3e-17 90.9 147 33.3
SpUn1206_0010 Schrenkiella parvula HOM05D008266 ORTHO05D000062 9.3e-17 90.9 96 51.0
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.3e-17 90.9 156 26.3
COL.COLO4_37049 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.2e-16 90.5 154 28.6
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 1.2e-16 90.5 157 27.4
COL.COLO4_07386 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.6e-16 90.1 137 32.8
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 1.6e-16 90.1 148 33.8
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 1.6e-16 90.1 157 28.7
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 2.1e-16 89.7 156 26.3
THA.LOC104798660 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.7e-16 89.4 98 36.7
THA.LOC104810679 Tarenaya hassleriana HOM05D000107 ORTHO05D009534 2.7e-16 89.4 98 36.7
THA.LOC104815165 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.7e-16 89.4 98 36.7
THA.LOC104818152 Tarenaya hassleriana HOM05D000107 ORTHO05D009534 2.7e-16 89.4 98 36.7
THA.LOC104820082 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 2.7e-16 89.4 98 36.7
BcaB02g11130 Brassica carinata HOM05D008266 ORTHO05D000062 2.3e-15 86.3 75 45.3
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.3e-15 86.3 156 25.6
Aa31sc360G20 Aethionema arabicum HOM05D001086 ORTHO05D001112 3.0e-15 85.9 155 31.0
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 3.9e-15 85.5 82 41.5
ECA247G2380 Erigeron canadensis HOM05D000107 ORTHO05D000062 5.1e-15 85.1 148 31.1
BolC5t33452H Brassica oleracea HOM05D001086 ORTHO05D009904 1.1e-14 84.0 151 31.1
COL.COLO4_23532 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.1e-14 84.0 144 25.7
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 1.5e-14 83.6 106 40.6
BcaC08g47042 Brassica carinata HOM05D008266 ORTHO05D000062 1.9e-14 83.2 77 42.9
BcaNung02471 Brassica carinata HOM05D008266 ORTHO05D000062 3.3e-14 82.4 85 42.4
SHI51771 Sapria himalayana HOM05D000107 ORTHO05D000062 7.3e-14 81.3 156 27.6
THA.LOC104798989 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 9.6e-14 80.9 90 34.4
Manes.13G071916 Manihot esculenta HOM05D000107 ORTHO05D009534 1.6e-13 80.1 156 25.6
COL.COLO4_08610 Corchorus olitorius HOM05D000107 ORTHO05D000062 4.8e-13 78.6 152 28.3
CAN.G628.16 Capsicum annuum HOM05D000292 ORTHO05D000172 8.1e-13 77.8 156 26.9
Ca_12327_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.4e-12 76.3 127 33.1
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.0e-12 75.5 131 30.5
BcaB03g16140 Brassica carinata HOM05D008266 ORTHO05D000062 5.3e-12 75.1 86 36.0
SHI31941 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-12 74.7 123 30.1
TPR.G36007 Trifolium pratense HOM05D000107 ORTHO05D000062 9.0e-12 74.3 156 29.5
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 1.2e-11 73.9 71 40.8
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.2e-11 73.9 154 27.3
BcaB04g17841 Brassica carinata HOM05D008266 ORTHO05D000062 1.5e-11 73.6 74 39.2
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.6e-11 72.8 141 29.8
SHI37598 Sapria himalayana HOM05D000107 ORTHO05D000062 5.8e-11 71.6 156 28.2
SHI41193 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-11 71.2 155 29.7
COL.COLO4_25025 Corchorus olitorius HOM05D010609 ORTHO05D010911 9.9e-11 70.9 110 30.0
ECA234G1982 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.3e-10 70.5 115 31.3
BolC2t08050H Brassica oleracea HOM05D008266 ORTHO05D000062 1.7e-10 70.1 31 100.0
Carub.0006s2725 Capsella rubella HOM05D001086 ORTHO05D009904 2.2e-10 69.7 129 26.4
C06p15090 Brassica napus HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
BolC1t04557H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
BolC2t10248H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
BolC3t20058H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
BolC6t36685H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
BolC7t42130H Brassica oleracea HOM05D008266 ORTHO05D000062 4.9e-10 68.6 31 96.8
COL.COLO4_33324 Corchorus olitorius HOM05D000107 ORTHO05D000062 6.4e-10 68.2 103 32.0
COL.COLO4_33848 Corchorus olitorius HOM05D000107 ORTHO05D000062 6.4e-10 68.2 91 34.1
BcaC04g19807 Brassica carinata HOM05D008134 ORTHO05D006374 1.1e-09 67.4 29 96.6
SHI03191 Sapria himalayana HOM05D000107 ORTHO05D009534 1.1e-09 67.4 156 26.3
EL10Ac9g20869 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-09 67.0 154 26.0
BolC5t31567H Brassica oleracea HOM05D008266 ORTHO05D000062 1.9e-09 66.6 31 93.5
SHI50626 Sapria himalayana HOM05D000648 ORTHO05D000062 2.4e-09 66.2 156 25.6
EL10Ac7g17546 Beta vulgaris HOM05D000107 ORTHO05D000062 3.2e-09 65.9 154 25.3
BcaB06g26682 Brassica carinata HOM05D008266 ORTHO05D000062 3.2e-09 65.9 74 35.1
Ca_20271_v3 Cicer arietinum L. HOM05D000107 ORTHO05D011816 3.2e-09 65.9 139 26.6
Manes.10G087532 Manihot esculenta HOM05D000107 ORTHO05D009534 3.2e-09 65.9 120 25.8
BolC3t18806H Brassica oleracea HOM05D008266 ORTHO05D000062 4.2e-09 65.5 31 93.5
THA.LOC104823114 Tarenaya hassleriana HOM05D000107 ORTHO05D000062 5.5e-09 65.1 74 37.8
EL10Ac6g14362 Beta vulgaris HOM05D000107 ORTHO05D000062 9.3e-09 64.3 154 24.7
Ca_07081_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.3e-09 64.3 139 23.7
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 9.3e-09 64.3 66 40.9
EL10Ac5g11499 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-08 63.5 154 24.0
EL10Ac5g12078 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-08 63.5 154 24.7
Rhsim02G0157900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-08 63.5 158 27.2
EL10Ac3g06762 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-08 63.2 154 24.7
EL10Ac3g06764 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-08 63.2 154 24.7
EL10Ac6g14419 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-08 63.2 154 24.7
EL10Ac5g10888 Beta vulgaris HOM05D000107 ORTHO05D000062 2.7e-08 62.8 154 24.7
EL10Ac3g06535 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-08 62.4 154 24.0
EL10Ac5g11788 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-08 62.4 154 24.7
PSO541G6361 Papaver somniferum HOM05D000107 ORTHO05D000062 3.5e-08 62.4 153 26.8
PSO781G0150 Papaver somniferum HOM05D000107 ORTHO05D000062 3.5e-08 62.4 153 26.8
SHI40666 Sapria himalayana HOM05D000648 ORTHO05D009534 3.5e-08 62.4 155 27.1
Manes.09G152601 Manihot esculenta HOM05D000107 ORTHO05D000062 4.6e-08 62.0 94 29.8
EL10Ac7g16686 Beta vulgaris HOM05D000107 ORTHO05D000062 6.0e-08 61.6 154 24.0
AUR62043240 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.0e-08 61.6 153 26.1
PSO781G0158 Papaver somniferum HOM05D000107 ORTHO05D000062 6.0e-08 61.6 153 26.8
EL10Ac1g01791 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-08 61.2 154 24.0
EL10Ac8g19870 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-08 61.2 155 25.2
Manes.11G017526 Manihot esculenta HOM05D000107 ORTHO05D000062 1.0e-07 60.8 94 28.7
SHI33135 Sapria himalayana HOM05D000648 ORTHO05D009534 1.0e-07 60.8 147 27.2
TWI73G1301 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.0e-07 60.8 130 28.5
EL10Ac3g06668 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-07 60.5 168 24.4
EL10Ac5g11174 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-07 60.5 154 24.0
EL10Ac1g02241 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-07 60.1 152 24.3
COL.COLO4_36911 Corchorus olitorius HOM05D000107 ORTHO05D000062 1.8e-07 60.1 64 37.5
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-07 60.1 154 23.4
TWI34G0033 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.3e-07 59.7 157 25.5
TWI79G1100 Tripterygium wilfordii HOM05D000107 ORTHO05D009534 2.3e-07 59.7 101 30.7
EL10Ac4g08668 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-07 59.3 152 24.3
EL10Ac7g17163 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-07 59.3 155 22.6
EL10Ac9g21064 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-07 59.3 155 22.6
CSS0011195 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.0e-07 59.3 157 24.8
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 3.0e-07 59.3 127 27.6
EL10Ac2g03559 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-07 58.9 155 22.6
EL10Ac3g07223 Beta vulgaris HOM05D000107 ORTHO05D000062 3.9e-07 58.9 155 21.9
CAN.G80.40 Capsicum annuum HOM05D000107 ORTHO05D000062 3.9e-07 58.9 85 29.4
Ca_20306_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 3.9e-07 58.9 67 38.8
EL10Ac6g13586 Beta vulgaris HOM05D000107 ORTHO05D000062 8.7e-07 57.8 155 21.9
EL10Ac6g13628 Beta vulgaris HOM05D000107 ORTHO05D000062 8.7e-07 57.8 155 21.9
COL.COLO4_10168 Corchorus olitorius HOM05D000107 ORTHO05D000062 8.7e-07 57.8 82 34.1
COL.COLO4_22692 Corchorus olitorius HOM05D025240 ORTHO05D019037 1.1e-06 57.4 117 26.5
EL10Ac1g02032 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-06 57.0 159 23.9
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 1.5e-06 57.0 67 37.3
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-06 56.6 159 23.9
EL10Ac8g19519 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-06 56.6 155 21.9
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-06 56.2 159 23.9
TPR.G20799 Trifolium pratense HOM05D000107 ORTHO05D000062 2.5e-06 56.2 61 42.6
EL10Ac2g03017 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-06 55.8 154 22.7
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 3.3e-06 55.8 159 23.9
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 4.3e-06 55.5 159 23.9
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.3e-06 55.5 128 25.0
Sp4g09210 Schrenkiella parvula HOM05D008266 ORTHO05D000062 5.6e-06 55.1 32 75.0
EL10Ac3g06998 Beta vulgaris HOM05D000107 ORTHO05D000062 7.4e-06 54.7 159 22.6
EL10Ac4g08589 Beta vulgaris HOM05D000107 ORTHO05D000062 9.6e-06 54.3 154 24.0
BcaB01g04231 Brassica carinata HOM05D018744 ORTHO05D000062 9.6e-06 54.3 39 46.2
TWI53G1662 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.6e-06 54.3 126 23.0


User provided reference genes

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