Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung07292 Brassica carinata HOM05D005751 ORTHO05D007198 8.8e-90 333.6 165 100.0
A03p13000 Brassica napus HOM05D005751 ORTHO05D007198 1.4e-58 229.9 174 70.7
BraA03t10610Z Brassica rapa HOM05D005751 ORTHO05D007198 1.4e-58 229.9 174 70.7
BolC3t13958H Brassica oleracea HOM05D005751 ORTHO05D007198 1.8e-58 229.6 174 70.7
C03p15170 Brassica napus HOM05D005751 ORTHO05D007198 2.3e-58 229.2 174 70.7
BcaB01g04441 Brassica carinata HOM05D005751 ORTHO05D007198 5.2e-58 228.0 143 81.1
Sp6g18760 Schrenkiella parvula HOM05D005751 ORTHO05D007198 9.2e-55 217.2 177 66.7
BcaC01g06463 Brassica carinata HOM05D005751 ORTHO05D007198 3.0e-53 212.2 174 67.8
CARHR270800 Cardamine hirsuta HOM05D005751 ORTHO05D007198 3.9e-53 211.8 172 65.7
AL8G32950 Arabidopsis lyrata HOM05D005751 ORTHO05D007198 6.6e-53 211.1 177 64.4
Thhalv10014727m.g Eutrema salsugineum HOM05D005751 ORTHO05D007198 1.1e-52 210.3 177 65.0
BcaC04g20019 Brassica carinata HOM05D005751 ORTHO05D007198 1.9e-52 209.5 156 71.2
BcaB08g36014 Brassica carinata HOM05D005751 ORTHO05D007198 1.6e-51 206.5 181 62.4
BraA10t43528Z Brassica rapa HOM05D005751 ORTHO05D007198 2.8e-51 205.7 176 64.2
A10p14370 Brassica napus HOM05D005751 ORTHO05D007198 4.7e-51 204.9 176 63.6
AT5G57040 Arabidopsis thaliana HOM05D005751 ORTHO05D007198 6.8e-50 201.1 179 63.7
BolC9t57719H Brassica oleracea HOM05D005751 ORTHO05D007198 6.8e-50 201.1 176 62.5
Carub.0008s1755 Capsella rubella HOM05D005751 ORTHO05D007198 1.3e-48 196.8 141 70.9
Aa31LG3G12940 Aethionema arabicum HOM05D005751 ORTHO05D007198 4.7e-43 178.3 132 68.2
Gohir.A06G073900 Gossypium hirsutum HOM05D005751 ORTHO05D007198 1.2e-38 163.7 126 62.7
COL.COLO4_18163 Corchorus olitorius HOM05D005751 ORTHO05D007198 1.6e-38 163.3 136 62.5
THA.LOC104811753 Tarenaya hassleriana HOM05D005751 ORTHO05D007198 1.6e-38 163.3 177 54.2
Duzib168G1813 Durio zibethinus HOM05D005751 ORTHO05D007198 2.1e-38 162.9 178 49.4
Thecc.09G083800 Theobroma cacao HOM05D005751 ORTHO05D007198 2.1e-38 162.9 122 63.9
Duzib150G0581 Durio zibethinus HOM05D005751 ORTHO05D007198 6.0e-38 161.4 116 66.4
EL10Ac8g19167 Beta vulgaris HOM05D005751 ORTHO05D007198 7.8e-38 161.0 153 55.6
Manes.16G099500 Manihot esculenta HOM05D005751 ORTHO05D007198 1.3e-37 160.2 115 67.8
Ciclev10009538m.g Citrus clementina HOM05D005751 ORTHO05D007198 1.7e-37 159.8 110 70.9
Gohir.D06G072800 Gossypium hirsutum HOM05D005751 ORTHO05D007198 1.7e-37 159.8 126 61.1
Lj4g0012446 Lotus japonicus HOM05D005751 ORTHO05D007198 2.3e-37 159.5 115 65.2
CANSAT56G3008 Cannabis sativa HOM05D005751 ORTHO05D007198 3.0e-37 159.1 154 57.1
Migut.J00571 Erythranthe guttata HOM05D005751 ORTHO05D007198 3.0e-37 159.1 181 48.1
Sc18g0002310 Simmondsia chinensis HOM05D005751 ORTHO05D007198 3.0e-37 159.1 127 60.6
TWI34G0035 Tripterygium wilfordii HOM05D005751 ORTHO05D007198 3.9e-37 158.7 122 62.3
Cfa003053 Carpinus fangiana HOM05D005751 ORTHO05D007198 5.1e-37 158.3 139 61.2
Ah.09g227980 Amaranthus hybridus HOM05D005751 ORTHO05D007198 8.6e-37 157.5 127 59.8
AUR62009007 Chenopodium quinoa HOM05D005751 ORTHO05D007198 8.6e-37 157.5 111 66.7
AUR62023295 Chenopodium quinoa HOM05D005751 ORTHO05D007198 8.6e-37 157.5 111 66.7
Ca_21296_v3 Cicer arietinum L. HOM05D005751 ORTHO05D007198 8.6e-37 157.5 135 58.5
Haze_25944 Corylus avellana HOM05D005751 ORTHO05D007198 8.6e-37 157.5 139 60.4
Sabra06G0116100 Salix brachista HOM05D005751 ORTHO05D007198 1.1e-36 157.1 115 67.0
SGA_v2.0_scaffold91G28064 Striga asiatica HOM05D005751 ORTHO05D007198 1.1e-36 157.1 138 58.0
MSTRG.19491 Avicennia marina HOM05D005751 ORTHO05D007198 1.5e-36 156.8 109 69.7
Hund08697 Selenicereus undatus HOM05D005751 ORTHO05D007198 1.5e-36 156.8 117 64.1
VMungo1215G3373 Vigna mungo HOM05D005751 ORTHO05D007198 1.5e-36 156.8 115 64.3
arahy.Tifrunner.gnm1.ann1.ZDQ9N1 Arachis hypogaea HOM05D005751 ORTHO05D007198 2.5e-36 156.0 130 60.0
Prupe.7G205300 Prunus persica HOM05D005751 ORTHO05D007198 2.5e-36 156.0 122 62.3
arahy.Tifrunner.gnm1.ann1.9N5J50 Arachis hypogaea HOM05D005751 ORTHO05D007198 3.3e-36 155.6 130 60.0
Hma1.2p1_0169F.1_g074820 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 3.3e-36 155.6 113 65.5
Medtr4g125860 Medicago truncatula HOM05D005751 ORTHO05D007198 4.3e-36 155.2 122 60.7
ECA234G1336 Erigeron canadensis HOM05D005751 ORTHO05D007198 5.6e-36 154.8 124 61.3
Glyma.17G052700 Glycine max HOM05D005751 ORTHO05D007198 5.6e-36 154.8 122 61.5
MD15G1211500 Malus domestica HOM05D005751 ORTHO05D007198 5.6e-36 154.8 109 69.7
Potri.018G056200 Populus trichocarpa HOM05D005751 ORTHO05D007198 5.6e-36 154.8 128 61.7
Solyc07g040950.3 Solanum lycopersicum HOM05D005751 ORTHO05D007198 5.6e-36 154.8 154 54.5
TAR624G1021 Trochodendron aralioides HOM05D005751 ORTHO05D007198 5.6e-36 154.8 122 62.3
DCAR_028277 Daucus carota HOM05D005751 ORTHO05D007198 7.3e-36 154.5 116 62.9
PGSC0003DMG400010712 Solanum tuberosum HOM05D005751 ORTHO05D007198 7.3e-36 154.5 126 61.9
Actinidia39706 Actinidia chinensis HOM05D005751 ORTHO05D007198 9.6e-36 154.1 111 65.8
Peaxi162Scf00494g00510 Petunia axillaris HOM05D005751 ORTHO05D007198 9.6e-36 154.1 109 67.9
QL02p061913 Quercus lobata HOM05D005751 ORTHO05D007198 9.6e-36 154.1 117 64.1
Lsat_1_v5_gn_5_143221 Lactuca sativa HOM05D005751 ORTHO05D007198 1.2e-35 153.7 134 58.2
Sopen07g020020 Solanum pennellii HOM05D005751 ORTHO05D007198 1.2e-35 153.7 126 61.9
Cpa.g.sc28.129 Carica papaya HOM05D005751 ORTHO05D007198 1.6e-35 153.3 107 68.2
CiPaw.03G211900 Carya illinoinensis HOM05D005751 ORTHO05D007198 1.6e-35 153.3 106 69.8
MELO3C015494.2 Cucumis melo HOM05D005751 ORTHO05D007198 1.6e-35 153.3 115 65.2
Lalb_Chr12g0199911 Lupinus albus HOM05D005751 ORTHO05D007198 1.6e-35 153.3 115 64.3
Nitab4.5_0001519g0150 Nicotiana tabacum HOM05D005751 ORTHO05D007198 1.6e-35 153.3 130 58.5
Cc06_g11700 Coffea canephora HOM05D005751 ORTHO05D007198 2.8e-35 152.5 131 58.8
CsaV3_1G040650 Cucumis sativus L. HOM05D005751 ORTHO05D007198 2.8e-35 152.5 115 64.3
Dinv36789 Davidia involucrata HOM05D005751 ORTHO05D007198 4.7e-35 151.8 113 61.9
SalBow6G2198 Salvia bowleyana HOM05D005751 ORTHO05D007198 4.7e-35 151.8 143 55.2
ClCG03G015400 Citrullus lanatus HOM05D005751 ORTHO05D007198 6.2e-35 151.4 115 64.3
HanXRQChr12g0354491 Helianthus annuus HOM05D005751 ORTHO05D007198 6.2e-35 151.4 110 64.5
Nitab4.5_0006861g0030 Nicotiana tabacum HOM05D005751 ORTHO05D007198 6.2e-35 151.4 126 60.3
Aqoxy7G04004 Aquilegia oxysepala HOM05D005751 ORTHO05D007198 8.1e-35 151.0 129 58.1
Glyma.13G106600 Glycine max HOM05D005751 ORTHO05D007198 8.1e-35 151.0 136 55.9
CAN.G235.10 Capsicum annuum HOM05D005751 ORTHO05D007198 1.1e-34 150.6 126 61.1
Sed0022874 Sechium edule HOM05D005751 ORTHO05D007198 1.4e-34 150.2 115 63.5
Phvul.003G134400 Phaseolus vulgaris HOM05D005751 ORTHO05D007198 1.8e-34 149.8 115 61.7
Eucgr.C03409 Eucalyptus grandis HOM05D005751 ORTHO05D007198 2.4e-34 149.4 129 58.1
Oeu051302.1 Olea europaea HOM05D005751 ORTHO05D007198 2.4e-34 149.4 106 67.0
FvH4_1g07980 Fragaria vesca HOM05D005751 ORTHO05D007198 3.1e-34 149.1 109 65.1
Gorai.010G084800 Gossypium raimondii HOM05D005751 ORTHO05D007198 4.0e-34 148.7 117 61.5
GSVIVG01015161001 Vitis vinifera HOM05D005751 ORTHO05D007198 6.9e-34 147.9 122 58.2
VMungo1215G1838 Vigna mungo HOM05D005751 ORTHO05D007198 1.2e-33 147.1 128 57.0
CSS0015550 Camellia sinensis var. sinensis HOM05D005751 ORTHO05D007198 1.5e-33 146.7 106 64.2
Rhsim05G0015000 Rhododendron simsii HOM05D005751 ORTHO05D007198 2.6e-33 146.0 106 66.0
Psat0s1725g0120 Pisum sativum HOM05D005751 ORTHO05D007198 3.4e-33 145.6 132 56.1
Atru.chr7.1637 Acer truncatum HOM05D005751 ORTHO05D007198 4.4e-33 145.2 98 72.4
ATR1153G002 Amborella trichopoda HOM05D005751 ORTHO05D007198 4.4e-33 145.2 110 62.7
PSO210G7392 Papaver somniferum HOM05D005751 ORTHO05D007198 7.6e-33 144.4 117 58.1
AUR62044275 Chenopodium quinoa HOM05D005751 ORTHO05D007198 9.9e-33 144.1 100 68.0
Zm00001eb032820 Zea mays HOM05D005751 ORTHO05D007198 9.9e-33 144.1 138 51.4
vmacro17149 Vaccinium macrocarpon HOM05D005751 ORTHO05D007198 1.7e-32 143.3 106 63.2
PSO210G0920 Papaver somniferum HOM05D005751 ORTHO05D007198 2.2e-32 142.9 117 56.4
PGR102G3219 Punica granatum HOM05D005751 ORTHO05D007198 4.9e-32 141.7 123 56.9
C09p48710 Brassica napus HOM05D005751 ORTHO05D007198 1.1e-31 140.6 93 73.1
Os07g0160400 Oryza sativa ssp. japonica HOM05D005751 ORTHO05D007198 1.1e-31 140.6 132 50.8
MD02G1084200 Malus domestica HOM05D005751 ORTHO05D007198 2.4e-31 139.4 100 67.0
CDE02G0045 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 5.4e-31 138.3 146 47.9
HPP92_020002 Vanilla planifolia HOM05D005751 ORTHO05D007198 1.2e-30 137.1 106 59.4
RcHm_v2.0_Chr2g0094011 Rosa chinensis HOM05D005751 ORTHO05D007198 4.6e-30 135.2 136 51.5
RcHm_v2.0_Chr2g0093891 Rosa chinensis HOM05D005751 ORTHO05D007198 1.0e-29 134.0 100 63.0
TPR.G20403 Trifolium pratense HOM05D005751 ORTHO05D007198 1.7e-29 133.3 106 60.4
CBR_g3298 Chara braunii HOM05D005751 ORTHO05D007198 4.3e-28 128.6 143 47.6
Mapoly0070s0082 Marchantia polymorpha HOM05D005751 ORTHO05D007198 4.3e-28 128.6 145 46.9
FAN19G0250 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.4e-26 123.6 124 51.6
SMO356G0241 Selaginella moellendorffii HOM05D005751 ORTHO05D007198 5.8e-25 118.2 102 54.9
Cre10.g466500 Chlamydomonas reinhardtii HOM05D005751 ORTHO05D007198 3.8e-24 115.5 101 54.5
Pp3c3_33270 Physcomitrium patens HOM05D005751 ORTHO05D007198 6.4e-24 114.8 131 45.8
FAN23G0534 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.6e-22 110.2 91 59.3
FAN26G0267 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.6e-22 110.2 91 59.3
FAN26G0888 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.6e-22 110.2 91 59.3
SEGI_26166 Sequoiadendron giganteum HOM05D005751 ORTHO05D007198 2.1e-22 109.8 96 54.2
Pp3c4_10740 Physcomitrium patens HOM05D005751 ORTHO05D007198 2.7e-22 109.4 103 51.5
Nn6g35546 Nelumbo nucifera HOM05D005751 ORTHO05D007198 1.1e-20 104.0 96 57.3
unitig_0.g2267 Utricularia gibba HOM05D005751 ORTHO05D007198 4.3e-20 102.1 78 64.1
Hma1.2p1_0169F.1_g074830 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 4.8e-19 98.6 78 61.5
MCO05G344 Micromonas commoda HOM05D005751 ORTHO05D007198 3.4e-17 92.4 106 40.6
AagrBONN_evm.TU.Sc2ySwM_228.5761 Anthoceros agrestis HOM05D005751 ORTHO05D007198 7.6e-17 91.3 124 41.1
Gohir.A07G143100 Gossypium hirsutum HOM05D005751 ORTHO05D007198 5.5e-15 85.1 71 57.7
Mapoly0083s0052 Marchantia polymorpha HOM05D005751 ORTHO05D007198 7.1e-15 84.7 98 44.9
PRCOL_00003968 Prasinoderma coloniale HOM05D005751 ORTHO05D007198 2.1e-14 83.2 91 44.0
Mapoly0078s0028 Marchantia polymorpha HOM05D005751 ORTHO05D007198 7.9e-14 81.3 124 37.1
AUR62029026 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.3e-12 75.9 99 45.5
MBI05_g15475_MAGBIO Magnolia biondii HOM05D005751 ORTHO05D007198 1.5e-09 67.0 35 82.9
CDE04G1502 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 1.9e-07 60.1 35 71.4
Gohir.A04G044500 Gossypium hirsutum HOM05D005751 ORTHO05D007198 7.9e-06 54.7 42 54.8


User provided reference genes

Program Settings