Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung07133 Brassica carinata HOM05D005413 ORTHO05D006536 2.2e-64 248.8 125 100.0
BcaC01g06609 Brassica carinata HOM05D005413 ORTHO05D006536 4.4e-57 224.6 125 92.0
BolC3t13687H Brassica oleracea HOM05D005413 ORTHO05D006536 4.4e-57 224.6 125 92.0
BraA03t10367Z Brassica rapa HOM05D005413 ORTHO05D006536 4.4e-57 224.6 125 92.0
C03p12140 Brassica napus HOM05D005413 ORTHO05D006536 1.7e-56 222.6 125 91.2
A03p10550 Brassica napus HOM05D005413 ORTHO05D006536 4.8e-56 221.1 125 91.2
Thhalv10014324m.g Eutrema salsugineum HOM05D005413 ORTHO05D006536 8.8e-50 200.3 131 81.7
BcaB01g04747 Brassica carinata HOM05D005413 ORTHO05D006536 9.7e-49 196.8 122 84.4
CARHR191490 Cardamine hirsuta HOM05D005413 ORTHO05D006536 4.8e-40 167.9 132 70.5
Sp6g23150 Schrenkiella parvula HOM05D005413 ORTHO05D006536 6.1e-35 151.0 132 67.4
Aa31LG1G13390 Aethionema arabicum HOM05D005413 ORTHO05D006536 1.7e-29 132.9 138 60.9
AL6G33000 Arabidopsis lyrata HOM05D005413 ORTHO05D006536 1.2e-25 120.2 81 79.0
Thecc.09G267600 Theobroma cacao HOM05D005413 ORTHO05D006536 2.6e-25 119.0 129 55.8
COL.COLO4_00160 Corchorus olitorius HOM05D005413 ORTHO05D006536 2.2e-24 115.9 129 55.0
AT5G22040 Arabidopsis thaliana HOM05D005413 ORTHO05D006536 3.7e-24 115.2 82 76.8
Duzib170G0305 Durio zibethinus HOM05D005413 ORTHO05D006536 4.9e-24 114.8 129 53.5
CiPaw.14G092700 Carya illinoinensis HOM05D005413 ORTHO05D006536 8.3e-24 114.0 129 52.7
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 1.9e-23 112.8 128 53.1
Rhsim01G0199900 Rhododendron simsii HOM05D005413 ORTHO05D006536 2.4e-23 112.5 130 54.6
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 7.0e-23 110.9 129 51.2
Rhsim01G0199600 Rhododendron simsii HOM05D005413 ORTHO05D006536 2.7e-22 109.0 130 53.8
Actinidia11676 Actinidia chinensis HOM05D005413 ORTHO05D006536 3.5e-22 108.6 129 50.4
FvH4_3g26150 Fragaria vesca HOM05D005413 ORTHO05D006536 6.0e-22 107.8 129 48.8
FAN11G2501 Fragaria x ananassa HOM05D005413 ORTHO05D006536 6.0e-22 107.8 129 48.8
FAN21G0466 Fragaria x ananassa HOM05D005413 ORTHO05D006536 6.0e-22 107.8 129 48.8
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 7.8e-22 107.5 129 51.2
Carub.0006s1968 Capsella rubella HOM05D005413 ORTHO05D006536 1.0e-21 107.1 79 74.7
Duzib168G1403 Durio zibethinus HOM05D005413 ORTHO05D006536 1.0e-21 107.1 129 51.2
FAN25G1874 Fragaria x ananassa HOM05D005413 ORTHO05D006536 1.7e-21 106.3 129 48.1
Gohir.D05G079900 Gossypium hirsutum HOM05D005413 ORTHO05D006536 3.9e-21 105.1 118 51.7
Gorai.009G081500 Gossypium raimondii HOM05D005413 ORTHO05D006536 3.9e-21 105.1 118 51.7
vmacro14313 Vaccinium macrocarpon HOM05D005413 ORTHO05D006536 3.9e-21 105.1 130 50.8
RcHm_v2.0_Chr5g0049091 Rosa chinensis HOM05D005413 ORTHO05D006536 5.0e-21 104.8 129 48.1
FAN16G0400 Fragaria x ananassa HOM05D005413 ORTHO05D006536 6.6e-21 104.4 129 48.1
FAN16G2334 Fragaria x ananassa HOM05D005413 ORTHO05D006536 6.6e-21 104.4 129 48.1
Gohir.A05G077100 Gossypium hirsutum HOM05D005413 ORTHO05D006536 8.6e-21 104.0 118 50.8
Lj2A950G18 Lonicera japonica HOM05D005413 ORTHO05D006536 1.2e-19 100.1 129 49.6
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 1.6e-19 99.8 129 49.6
GSVIVG01037530001 Vitis vinifera HOM05D005413 ORTHO05D006536 6.2e-19 97.8 129 48.1
unitig_899.g15382 Utricularia gibba HOM05D005413 ORTHO05D006536 1.1e-18 97.1 128 46.1
ECA238G0598 Erigeron canadensis HOM05D005413 ORTHO05D006536 3.1e-18 95.5 132 48.5
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 3.1e-18 95.5 129 46.5
Oeu031446.2 Olea europaea HOM05D005413 ORTHO05D006536 1.5e-17 93.2 120 46.7
Cc01_g07840 Coffea canephora HOM05D005413 ORTHO05D006536 2.6e-17 92.4 131 46.6
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 2.6e-17 92.4 129 44.2
Atru.chr3.3078 Acer truncatum HOM05D005413 ORTHO05D006536 3.4e-17 92.0 129 47.3
Atru.chr3.3087 Acer truncatum HOM05D005413 ORTHO05D006536 3.4e-17 92.0 129 47.3
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 3.4e-17 92.0 129 46.5
TAR623G0045 Trochodendron aralioides HOM05D005413 ORTHO05D006536 5.8e-17 91.3 129 43.4
MSTRG.12398 Avicennia marina HOM05D005413 ORTHO05D006536 2.2e-16 89.4 129 46.5
Manes.11G103700 Manihot esculenta HOM05D005413 ORTHO05D006536 2.9e-16 89.0 118 46.6
Lalb_Chr19g0136161 Lupinus albus HOM05D005413 ORTHO05D006536 3.7e-16 88.6 120 46.7
Peaxi162Scf00429g00512 Petunia axillaris HOM05D005413 ORTHO05D006536 6.4e-16 87.8 129 43.4
Nitab4.5_0000158g0110 Nicotiana tabacum HOM05D005413 ORTHO05D006536 8.3e-16 87.4 136 40.4
arahy.Tifrunner.gnm1.ann1.C0JSMI Arachis hypogaea HOM05D005413 ORTHO05D006536 1.1e-15 87.0 128 45.3
TPR.G4599 Trifolium pratense HOM05D005413 ORTHO05D006536 1.1e-15 87.0 133 42.1
arahy.Tifrunner.gnm1.ann1.K4CWT5 Arachis hypogaea HOM05D005413 ORTHO05D006536 1.4e-15 86.7 128 45.3
TWI79G1192 Tripterygium wilfordii HOM05D005413 ORTHO05D006536 1.9e-15 86.3 129 44.2
THA.LOC104815083 Tarenaya hassleriana HOM05D005413 ORTHO05D006536 3.2e-15 85.5 136 46.3
Prupe.6G147200 Prunus persica HOM05D005413 ORTHO05D006536 4.1e-15 85.1 109 46.8
Medtr4g050330 Medicago truncatula HOM05D005413 ORTHO05D006536 5.4e-15 84.7 136 42.6
MD11G1174800 Malus domestica HOM05D005413 ORTHO05D006536 7.0e-15 84.3 129 42.6
ClCG02G022490 Citrullus lanatus HOM05D005413 ORTHO05D006536 1.2e-14 83.6 121 43.8
Sed0018758 Sechium edule HOM05D005413 ORTHO05D006536 1.2e-14 83.6 130 43.1
Eucgr.J00585 Eucalyptus grandis HOM05D005413 ORTHO05D006536 1.6e-14 83.2 130 43.1
DCAR_018207 Daucus carota HOM05D005413 ORTHO05D006536 2.1e-14 82.8 128 41.4
MELO3C014525.2 Cucumis melo HOM05D005413 ORTHO05D006536 3.5e-14 82.0 121 43.8
CsaV3_6G038630 Cucumis sativus L. HOM05D005413 ORTHO05D006536 3.5e-14 82.0 121 43.8
Psat7g200680 Pisum sativum HOM05D005413 ORTHO05D006536 3.5e-14 82.0 128 43.0
PGR119G0748 Punica granatum HOM05D005413 ORTHO05D006536 3.0e-13 79.0 131 42.7
Nitab4.5_0008364g0010 Nicotiana tabacum HOM05D005413 ORTHO05D006536 5.1e-13 78.2 137 38.7
Hund06812 Selenicereus undatus HOM05D005413 ORTHO05D006536 8.6e-13 77.4 120 47.5
TAR633G2414 Trochodendron aralioides HOM05D005413 ORTHO05D006536 1.1e-12 77.0 120 39.2
HPP92_015644 Vanilla planifolia HOM05D005413 ORTHO05D006536 1.1e-12 77.0 131 42.7
Sopen11g029620 Solanum pennellii HOM05D005413 ORTHO05D006536 3.3e-12 75.5 131 40.5
Solyc11g071950.3 Solanum lycopersicum HOM05D005413 ORTHO05D006536 4.3e-12 75.1 131 40.5
PGSC0003DMG400002998 Solanum tuberosum HOM05D005413 ORTHO05D006536 9.5e-12 73.9 131 40.5
MD03G1159500 Malus domestica HOM05D005413 ORTHO05D006536 6.2e-11 71.2 107 43.9
Ca_19483_v3 Cicer arietinum L. HOM05D005413 ORTHO05D006536 1.1e-10 70.5 131 39.7
Dinv03807 Davidia involucrata HOM05D005413 ORTHO05D006536 1.1e-10 70.5 120 41.7
VMungo1127G2102 Vigna mungo HOM05D005413 ORTHO05D006536 5.2e-10 68.2 129 39.5
HanXRQChr05g0137071 Helianthus annuus HOM05D005413 ORTHO05D006536 6.8e-10 67.8 120 43.3
Potri.008G001700 Populus trichocarpa HOM05D005413 ORTHO05D006536 8.9e-10 67.4 122 42.6
Lalb_Chr03g0028501 Lupinus albus HOM05D005413 ORTHO05D006536 1.2e-09 67.0 133 39.8
Potri.008G015500 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.2e-09 67.0 118 42.4
Potri.010G244600 Populus trichocarpa HOM05D005413 ORTHO05D006536 1.2e-09 67.0 130 40.0
Dinv04422 Davidia involucrata HOM05D005413 ORTHO05D006536 3.4e-09 65.5 120 40.0
Lj3g0006130 Lotus japonicus HOM05D005413 ORTHO05D006536 3.4e-09 65.5 132 37.9
Phvul.011G100200 Phaseolus vulgaris HOM05D005413 ORTHO05D006536 3.4e-09 65.5 128 38.3
Sabra08G0009400 Salix brachista HOM05D005413 ORTHO05D006536 3.4e-09 65.5 121 39.7
Migut.D02382 Erythranthe guttata HOM05D005413 ORTHO05D006536 9.9e-09 63.9 132 40.9
Sabra10G0191100 Salix brachista HOM05D005413 ORTHO05D006536 9.9e-09 63.9 130 38.5
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 9.9e-09 63.9 115 40.0
Os03g0274700 Oryza sativa ssp. japonica HOM05D005413 ORTHO05D006536 1.3e-08 63.5 136 39.7
Zm00001eb012330 Zea mays HOM05D005413 ORTHO05D006536 2.9e-08 62.4 132 34.8
DCAR_012252 Daucus carota HOM05D005413 ORTHO05D006536 3.7e-08 62.0 111 44.1
Aqoxy1G00612 Aquilegia oxysepala HOM05D005413 ORTHO05D006536 6.4e-08 61.2 112 39.3
Glyma.12G095900 Glycine max HOM05D005413 ORTHO05D006536 6.4e-08 61.2 132 38.6
SGA_v2.0_scaffold22G09835 Striga asiatica HOM05D005413 ORTHO05D006536 6.4e-08 61.2 119 39.5
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 1.4e-07 60.1 135 34.8
AUR62024117 Chenopodium quinoa HOM05D005413 ORTHO05D006536 2.4e-07 59.3 121 39.7
Thecc.10G119400 Theobroma cacao HOM05D005413 ORTHO05D006536 3.2e-07 58.9 118 37.3
CSS0050484 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 5.4e-07 58.2 130 35.4
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 5.4e-07 58.2 119 37.0
Hma1.2p1_0098F.1_g048260 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 7.1e-07 57.8 120 37.5
Glyma.11G171773 Glycine max HOM05D005413 ORTHO05D006536 1.2e-06 57.0 133 36.1
AUR62005613 Chenopodium quinoa HOM05D005413 ORTHO05D006536 1.6e-06 56.6 121 38.0
CDE07G0886 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 2.1e-06 56.2 138 37.7
MBI15_g31416_MAGBIO Magnolia biondii HOM05D005413 ORTHO05D006536 2.7e-06 55.8 118 35.6
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 6.0e-06 54.7 137 34.3


User provided reference genes

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