Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung07009 Brassica carinata HOM05D001827 ORTHO05D001790 7.5e-44 181.0 169 100.0
C03p16210 Brassica napus HOM05D001827 ORTHO05D001790 5.9e-33 144.8 163 74.2
BraA03t10681Z Brassica rapa HOM05D001827 ORTHO05D001790 1.0e-32 144.1 163 88.3
A03p13780 Brassica napus HOM05D001827 ORTHO05D001790 3.3e-31 139.0 163 80.4
Carub.0008s1622 Capsella rubella HOM05D001827 ORTHO05D001790 2.6e-28 129.4 166 71.1
BolC3t14044H Brassica oleracea HOM05D001827 ORTHO05D001790 1.3e-24 117.1 163 82.8
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 2.5e-23 112.8 163 47.2
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 9.5e-23 110.9 163 43.6
THA.LOC104811675 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 8.9e-21 104.4 163 64.4
THA.LOC104817709 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 1.2e-17 94.0 163 61.3
CANSAT11G0161 Cannabis sativa HOM05D001827 ORTHO05D001790 7.8e-17 91.3 162 54.9
Eucgr.F02039 Eucalyptus grandis HOM05D001827 ORTHO05D001790 2.5e-15 86.3 163 55.8
MBI14_g13533_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 2.1e-14 83.2 163 46.6
Sp6g17740 Schrenkiella parvula HOM05D001827 ORTHO05D001790 4.0e-13 79.0 163 50.3
C09p46840 Brassica napus HOM05D001827 ORTHO05D001790 1.5e-12 77.0 162 60.5
BolC9t57534H Brassica oleracea HOM05D001827 ORTHO05D001790 1.5e-12 77.0 162 60.5
Sc03g0011630 Simmondsia chinensis HOM05D001827 ORTHO05D001790 3.4e-12 75.9 162 41.4
Sed0003258 Sechium edule HOM05D001827 ORTHO05D001790 1.3e-11 73.9 98 55.1
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 2.2e-11 73.2 163 43.6
BcaC04g20191 Brassica carinata HOM05D001827 ORTHO05D001790 3.7e-11 72.4 163 60.1
Cfa016913 Carpinus fangiana HOM05D001827 ORTHO05D001790 3.2e-10 69.3 99 43.4
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 4.1e-10 68.9 163 42.3
Haze_09842 Corylus avellana HOM05D001827 ORTHO05D001790 4.1e-10 68.9 99 44.4
MD11G1032400 Malus domestica HOM05D001827 ORTHO05D001790 4.1e-10 68.9 99 40.4
BcaB08g35954 Brassica carinata HOM05D001827 ORTHO05D001790 5.4e-10 68.6 156 59.0
MBI14_g08894_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 5.4e-10 68.6 163 41.7
CsaV3_3G004170 Cucumis sativus L. HOM05D001827 ORTHO05D001790 7.1e-10 68.2 99 42.4
ClCG10G004390 Citrullus lanatus HOM05D001827 ORTHO05D001790 9.2e-10 67.8 99 42.4
FvH4_3g42741 Fragaria vesca HOM05D001827 ORTHO05D001790 1.2e-09 67.4 99 41.4
CSS0010892 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 1.6e-09 67.0 99 41.4
CSS0027094 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 1.6e-09 67.0 99 41.4
MELO3C014113.2 Cucumis melo HOM05D001827 ORTHO05D001790 1.6e-09 67.0 99 41.4
FAN11G2212 Fragaria x ananassa HOM05D001827 ORTHO05D001790 2.1e-09 66.6 99 58.6
FAN16G2144 Fragaria x ananassa HOM05D001827 ORTHO05D001790 2.1e-09 66.6 99 58.6
FAN25G2361 Fragaria x ananassa HOM05D001827 ORTHO05D001790 2.1e-09 66.6 99 58.6
DCAR_013243 Daucus carota HOM05D001827 ORTHO05D001790 6.0e-09 65.1 99 58.6
FAN21G2473 Fragaria x ananassa HOM05D001827 ORTHO05D001790 6.0e-09 65.1 99 58.6
TWI39G0045 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 6.0e-09 65.1 99 39.4
Oeu046939.1 Olea europaea HOM05D001827 ORTHO05D001790 7.8e-09 64.7 163 42.9
Thhalv10012934m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 1.0e-08 64.3 163 51.5
vmacro11602 Vaccinium macrocarpon HOM05D001827 ORTHO05D001790 1.0e-08 64.3 99 62.6
RcHm_v2.0_Chr5g0076481 Rosa chinensis HOM05D001827 ORTHO05D001790 1.3e-08 63.9 99 39.4
Glyma.08G330800 Glycine max HOM05D001827 ORTHO05D001790 1.7e-08 63.5 99 57.6
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 1.7e-08 63.5 163 28.8
Rhsim06G0231100 Rhododendron simsii HOM05D001827 ORTHO05D001790 2.3e-08 63.2 99 61.6
Lj1C892G3 Lonicera japonica HOM05D001827 ORTHO05D001790 3.0e-08 62.8 163 56.4
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 5.1e-08 62.0 99 36.4
Actinidia04995 Actinidia chinensis HOM05D001827 ORTHO05D001790 6.6e-08 61.6 99 39.4
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 6.6e-08 61.6 163 28.2
CAN.G623.22 Capsicum annuum HOM05D001827 ORTHO05D001790 8.6e-08 61.2 99 38.4
Oeu005481.1 Olea europaea HOM05D001827 ORTHO05D001790 8.6e-08 61.2 163 47.9
Solyc07g065680.3 Solanum lycopersicum HOM05D001827 ORTHO05D001790 8.6e-08 61.2 98 39.8
PGSC0003DMG400022271 Solanum tuberosum HOM05D001827 ORTHO05D001790 8.6e-08 61.2 99 39.4
BcaNung07007 Brassica carinata HOM05D001827 ORTHO05D001790 1.1e-07 60.8 33 93.9
PGR083G1584 Punica granatum HOM05D001827 ORTHO05D001790 1.1e-07 60.8 163 50.3
CSS0038969 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 1.5e-07 60.5 99 64.6
CSS0046389 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 1.5e-07 60.5 99 64.6
Duzib268G1786 Durio zibethinus HOM05D001827 ORTHO05D001790 1.5e-07 60.5 99 49.5
ECA240G1712 Erigeron canadensis HOM05D001812 ORTHO05D001874 1.5e-07 60.5 162 53.7
Sabra16G0242100 Salix brachista HOM05D001827 ORTHO05D001790 1.5e-07 60.5 99 38.4
Hund23030 Selenicereus undatus HOM05D001827 ORTHO05D001790 3.3e-07 59.3 172 43.6
AT5G55860 Arabidopsis thaliana HOM05D001827 ORTHO05D001790 4.3e-07 58.9 163 47.2
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 4.3e-07 58.9 162 29.0
Peaxi162Scf00139g01120 Petunia axillaris HOM05D001827 ORTHO05D001790 4.3e-07 58.9 99 37.4
Sopen07g033890 Solanum pennellii HOM05D001827 ORTHO05D001790 4.3e-07 58.9 98 38.8
PSO210G6911 Papaver somniferum HOM05D001827 ORTHO05D001790 5.6e-07 58.5 99 36.4
GSVIVG01014707001 Vitis vinifera HOM05D001827 ORTHO05D001790 7.3e-07 58.2 92 59.8
AL8G31440 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 9.5e-07 57.8 162 50.0
arahy.Tifrunner.gnm1.ann1.21F8WZ Arachis hypogaea HOM05D001827 ORTHO05D001790 9.5e-07 57.8 156 28.2
arahy.Tifrunner.gnm1.ann1.5CFI8R Arachis hypogaea HOM05D001827 ORTHO05D001790 9.5e-07 57.8 156 28.2
PSO210G4928 Papaver somniferum HOM05D001827 ORTHO05D001790 9.5e-07 57.8 99 36.4
SGA_v2.0_scaffold42G15974 Striga asiatica HOM05D001827 ORTHO05D001790 9.5e-07 57.8 98 34.7
TPR.G8584 Trifolium pratense HOM05D001827 ORTHO05D001790 1.2e-06 57.4 163 27.6
EL10Ac4g07523 Beta vulgaris HOM05D001827 ORTHO05D001790 2.8e-06 56.2 99 42.4
Hma1.2p1_1516F.1_g288370 Hydrangea macrophylla HOM05D001827 ORTHO05D001790 2.8e-06 56.2 99 44.4
Nitab4.5_0004583g0090 Nicotiana tabacum HOM05D001827 ORTHO05D001790 3.6e-06 55.8 99 42.4
RcHm_v2.0_Chr5g0076561 Rosa chinensis HOM05D001827 ORTHO05D001790 6.2e-06 55.1 97 44.3
Ciclev10007701m.g Citrus clementina HOM05D001827 ORTHO05D001790 8.1e-06 54.7 99 54.5


User provided reference genes

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