Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06975 Brassica carinata HOM05D000138 ORTHO05D000078 1.6e-99 366.3 187 100.0
C07p62630 Brassica napus HOM05D000138 ORTHO05D000078 1.8e-66 256.5 131 96.2
BolC7t46679H Brassica oleracea HOM05D000138 ORTHO05D000078 1.8e-66 256.5 131 96.2
A03p65590 Brassica napus HOM05D000138 ORTHO05D000078 2.3e-66 256.1 130 96.2
BraA03t15609Z Brassica rapa HOM05D000138 ORTHO05D000078 2.3e-66 256.1 130 96.2
A01p01300 Brassica napus HOM05D000138 ORTHO05D000078 1.7e-61 240.0 131 90.8
BraA01t00127Z Brassica rapa HOM05D000138 ORTHO05D000078 1.7e-61 240.0 131 90.8
Sp7g35400 Schrenkiella parvula HOM05D000138 ORTHO05D000078 2.2e-61 239.6 131 90.1
C01p01460 Brassica napus HOM05D000138 ORTHO05D000078 5.0e-61 238.4 137 87.6
BolC1t00143H Brassica oleracea HOM05D000138 ORTHO05D000078 5.0e-61 238.4 137 87.6
BcaC01g00389 Brassica carinata HOM05D000138 ORTHO05D000078 2.5e-60 236.1 131 86.3
BolC3t20159H Brassica oleracea HOM05D000138 ORTHO05D000078 2.5e-60 236.1 131 86.3
C03p79210 Brassica napus HOM05D000138 ORTHO05D000078 4.2e-60 235.3 131 86.3
BcaB03g12332 Brassica carinata HOM05D000138 ORTHO05D000078 2.1e-59 233.0 131 85.5
A08p22790 Brassica napus HOM05D000138 ORTHO05D000078 7.9e-59 231.1 131 84.7
BraA08t34245Z Brassica rapa HOM05D000138 ORTHO05D000078 1.8e-58 229.9 131 84.0
AL7G12930 Arabidopsis lyrata HOM05D000138 ORTHO05D000078 1.8e-55 219.9 131 84.7
CARHR246140 Cardamine hirsuta HOM05D000138 ORTHO05D000078 1.1e-52 210.7 132 82.6
AT4G37750 Arabidopsis thaliana HOM05D000138 ORTHO05D000078 1.6e-51 206.8 131 82.4
Carub.0007s0250 Capsella rubella HOM05D000138 ORTHO05D000078 2.5e-49 199.5 122 82.8
Thhalv10024807m.g Eutrema salsugineum HOM05D000138 ORTHO05D000078 2.6e-46 189.5 134 76.1
Aa31LG6G14630 Aethionema arabicum HOM05D000138 ORTHO05D000078 1.2e-35 154.1 132 65.9
THA.LOC104807640 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 1.7e-21 107.1 170 44.1
ClCG01G017810 Citrullus lanatus HOM05D000138 ORTHO05D000078 9.8e-17 91.3 108 51.9
CsaV3_6G044340 Cucumis sativus L. HOM05D000138 ORTHO05D000078 2.2e-16 90.1 114 49.1
Sed0008770 Sechium edule HOM05D000138 ORTHO05D000078 2.8e-16 89.7 114 49.1
MELO3C007657.2 Cucumis melo HOM05D000138 ORTHO05D000078 6.3e-16 88.6 114 48.2
Cfa004390 Carpinus fangiana HOM05D000138 ORTHO05D000078 1.8e-15 87.0 118 44.1
QL06p038836 Quercus lobata HOM05D000138 ORTHO05D000078 2.4e-15 86.7 116 45.7
CSS0022420 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 1.6e-14 84.0 149 41.6
Haze_15023 Corylus avellana HOM05D000138 ORTHO05D000078 1.6e-14 84.0 118 43.2
Nn6g34524 Nelumbo nucifera HOM05D000138 ORTHO05D000078 2.0e-14 83.6 142 40.8
THA.LOC104804195 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 2.0e-14 83.6 148 43.2
Gorai.008G086000 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.7e-14 83.2 161 37.9
Duzib187G1195 Durio zibethinus HOM05D000138 ORTHO05D000078 3.5e-14 82.8 130 41.5
Gohir.A12G080500 Gossypium hirsutum HOM05D000138 ORTHO05D000078 5.9e-14 82.0 161 37.9
Gohir.D12G077200 Gossypium hirsutum HOM05D000138 ORTHO05D000078 5.9e-14 82.0 161 37.9
Gohir.D11G210900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 7.7e-14 81.6 99 49.5
Dinv23047 Davidia involucrata HOM05D000138 ORTHO05D000078 1.0e-13 81.3 122 45.1
Nn5g30670 Nelumbo nucifera HOM05D000138 ORTHO05D000078 1.0e-13 81.3 145 41.4
Dinv26961 Davidia involucrata HOM05D000138 ORTHO05D000078 1.7e-13 80.5 107 47.7
Thecc.01G076700 Theobroma cacao HOM05D000138 ORTHO05D000078 1.7e-13 80.5 152 38.8
Duzib147G1509 Durio zibethinus HOM05D000138 ORTHO05D000078 2.3e-13 80.1 130 41.5
Gorai.007G226500 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.3e-13 80.1 99 48.5
MD15G1301100 Malus domestica HOM05D000138 ORTHO05D000078 2.3e-13 80.1 114 47.4
GSVIVG01007388001 Vitis vinifera HOM05D000138 ORTHO05D000078 2.3e-13 80.1 102 49.0
FAN28G0690 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.9e-13 79.7 105 48.6
TAR628G1427 Trochodendron aralioides HOM05D000138 ORTHO05D000078 2.9e-13 79.7 144 41.0
TWI56G0187 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 3.8e-13 79.3 91 48.4
TWI77G0091 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 8.6e-13 78.2 119 39.5
Ciclev10025111m.g Citrus clementina HOM05D000138 ORTHO05D000078 1.1e-12 77.8 116 40.5
Manes.12G117800 Manihot esculenta HOM05D000138 ORTHO05D000078 1.1e-12 77.8 121 43.0
Potri.007G007400 Populus trichocarpa HOM05D000138 ORTHO05D000078 2.5e-12 76.6 123 41.5
THA.LOC104801659 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 2.5e-12 76.6 149 36.9
MD02G1190000 Malus domestica HOM05D000138 ORTHO05D000078 3.3e-12 76.3 117 47.0
Atru.chr3.1064 Acer truncatum HOM05D000138 ORTHO05D000078 4.3e-12 75.9 121 43.8
Sabra14G0006800 Salix brachista HOM05D000138 ORTHO05D000078 4.3e-12 75.9 146 36.3
Prupe.6G216400 Prunus persica HOM05D000138 ORTHO05D000078 5.6e-12 75.5 89 52.8
TWI36G0342 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 5.6e-12 75.5 91 49.5
TAR381G0918 Trochodendron aralioides HOM05D000138 ORTHO05D000078 5.6e-12 75.5 123 40.7
CANSAT01G1215 Cannabis sativa HOM05D000138 ORTHO05D000078 7.3e-12 75.1 104 47.1
Dinv44927 Davidia involucrata HOM05D000138 ORTHO05D000078 1.2e-11 74.3 95 49.5
Potri.014G012200 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.2e-11 74.3 125 40.0
Gohir.A11G212200 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.6e-11 73.9 99 47.5
FvH4_1g18270 Fragaria vesca HOM05D000138 ORTHO05D000078 2.1e-11 73.6 89 50.6
FAN19G2436 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.1e-11 73.6 89 50.6
MBI16_g06072_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 2.1e-11 73.6 88 48.9
SHI11870 Sapria himalayana HOM05D000138 ORTHO05D000078 2.1e-11 73.6 88 47.7
ATR0739G123 Amborella trichopoda HOM05D000138 ORTHO05D000078 2.8e-11 73.2 93 51.6
Dinv39204 Davidia involucrata HOM05D000138 ORTHO05D000078 2.8e-11 73.2 102 48.0
TAR625G0484 Trochodendron aralioides HOM05D000138 ORTHO05D000078 3.6e-11 72.8 128 39.8
Potri.005G148400 Populus trichocarpa HOM05D000138 ORTHO05D000078 6.1e-11 72.0 98 46.9
Sabra07G0005700 Salix brachista HOM05D000138 ORTHO05D000078 6.1e-11 72.0 141 37.6
CSS0000458 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 8.0e-11 71.6 83 51.8
CSS0003046 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 8.0e-11 71.6 83 51.8
Cfa013732 Carpinus fangiana HOM05D000138 ORTHO05D000078 8.0e-11 71.6 98 46.9
FAN23G1896 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.0e-10 71.2 89 48.3
FAN26G3403 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.0e-10 71.2 89 50.6
TWI12G1460 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 1.0e-10 71.2 103 46.6
Aqoxy5G00813 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 1.8e-10 70.5 96 43.8
Aqoxy6G02447 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 1.8e-10 70.5 142 37.3
Nitab4.5_0000142g0400 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.8e-10 70.5 104 43.3
Haze_22378 Corylus avellana HOM05D000138 ORTHO05D000078 2.3e-10 70.1 95 47.4
RcHm_v2.0_Chr2g0108831 Rosa chinensis HOM05D000138 ORTHO05D000078 2.3e-10 70.1 87 48.3
Cc10_g07680 Coffea canephora HOM05D000138 ORTHO05D000078 3.0e-10 69.7 111 42.3
PGSC0003DMG402021429 Solanum tuberosum HOM05D000138 ORTHO05D000078 3.0e-10 69.7 119 39.5
TAR376G0008 Trochodendron aralioides HOM05D000138 ORTHO05D000078 3.0e-10 69.7 121 37.2
Lj4C165T8 Lonicera japonica HOM05D000138 ORTHO05D000078 4.0e-10 69.3 121 40.5
Manes.18G050000 Manihot esculenta HOM05D000138 ORTHO05D000078 4.0e-10 69.3 93 47.3
PSO017G0015 Papaver somniferum HOM05D000138 ORTHO05D000078 5.2e-10 68.9 155 35.5
PSO170G4756 Papaver somniferum HOM05D000138 ORTHO05D000078 5.2e-10 68.9 155 35.5
Thecc.08G084000 Theobroma cacao HOM05D000138 ORTHO05D000078 5.2e-10 68.9 123 39.0
Nitab4.5_0001494g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 6.8e-10 68.6 85 51.8
Nitab4.5_0005305g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 6.8e-10 68.6 117 39.3
Potri.002G114800 Populus trichocarpa HOM05D000138 ORTHO05D000078 6.8e-10 68.6 93 46.2
Sabra02G0090800 Salix brachista HOM05D000138 ORTHO05D000078 6.8e-10 68.6 98 44.9
Solyc02g092050.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 6.8e-10 68.6 119 37.8
Gohir.A06G026300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 8.9e-10 68.2 103 42.7
Gohir.D06G023600 Gossypium hirsutum HOM05D000138 ORTHO05D000078 8.9e-10 68.2 103 42.7
Gorai.010G028100 Gossypium raimondii HOM05D000138 ORTHO05D000078 8.9e-10 68.2 103 42.7
GSVIVG01009294001 Vitis vinifera HOM05D000138 ORTHO05D000078 8.9e-10 68.2 99 47.5
arahy.Tifrunner.gnm1.ann1.9T6609 Arachis hypogaea HOM05D000138 ORTHO05D000078 1.2e-09 67.8 91 42.9
CAN.G1343.9 Capsicum annuum HOM05D000138 ORTHO05D000078 1.2e-09 67.8 117 42.7
Manes.05G184000 Manihot esculenta HOM05D000138 ORTHO05D000078 1.2e-09 67.8 106 43.4
Lj4g0014754 Lotus japonicus HOM05D000138 ORTHO05D000078 1.5e-09 67.4 113 41.6
Lj5g0008412 Lotus japonicus HOM05D000138 ORTHO05D000078 1.5e-09 67.4 115 40.9
Atru.chr13.875 Acer truncatum HOM05D000138 ORTHO05D000078 2.0e-09 67.0 87 48.3
Lj4A752T18 Lonicera japonica HOM05D000138 ORTHO05D000078 2.0e-09 67.0 115 45.2
CSS0028484 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 2.6e-09 66.6 86 48.8
Duzib093G0161 Durio zibethinus HOM05D000138 ORTHO05D000078 2.6e-09 66.6 120 39.2
Phvul.009G074300 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 2.6e-09 66.6 133 36.8
VMungo1309G0528 Vigna mungo HOM05D000138 ORTHO05D000078 3.4e-09 66.2 137 38.7
Peaxi162Scf00096g01849 Petunia axillaris HOM05D000138 ORTHO05D000078 4.4e-09 65.9 124 41.1
Sopen04g031090 Solanum pennellii HOM05D000138 ORTHO05D000078 4.4e-09 65.9 124 38.7
Actinidia16407 Actinidia chinensis HOM05D000138 ORTHO05D000078 5.7e-09 65.5 114 40.4
arahy.Tifrunner.gnm1.ann1.ZL8GWI Arachis hypogaea HOM05D000138 ORTHO05D000078 5.7e-09 65.5 90 42.2
Cc07_g07380 Coffea canephora HOM05D000138 ORTHO05D000078 5.7e-09 65.5 110 40.0
Phvul.003G232600 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 5.7e-09 65.5 120 39.2
vmacro18010 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 5.7e-09 65.5 121 40.5
CiPaw.07G171600 Carya illinoinensis HOM05D000138 ORTHO05D000078 7.5e-09 65.1 134 40.3
Solyc04g077490.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 7.5e-09 65.1 124 38.7
SGA_v2.0_scaffold15G07503 Striga asiatica HOM05D000138 ORTHO05D000078 7.5e-09 65.1 121 42.1
MSTRG.25020 Avicennia marina HOM05D000138 ORTHO05D000078 9.8e-09 64.7 90 48.9
Sopen02g036630 Solanum pennellii HOM05D000138 ORTHO05D000078 9.8e-09 64.7 151 34.4
Rhsim06G0064900 Rhododendron simsii HOM05D000138 ORTHO05D000078 1.3e-08 64.3 88 48.9
Sc02g0008130 Simmondsia chinensis HOM05D000138 ORTHO05D000078 1.3e-08 64.3 106 43.4
TPR.G30206 Trifolium pratense HOM05D000138 ORTHO05D000078 1.3e-08 64.3 119 42.9
MSTRG.3482 Avicennia marina HOM05D000138 ORTHO05D000078 1.7e-08 63.9 120 39.2
Glyma.17G158300 Glycine max HOM05D000138 ORTHO05D000078 1.7e-08 63.9 104 41.3
Lalb_Chr23g0267641 Lupinus albus HOM05D000138 ORTHO05D000078 1.7e-08 63.9 138 39.1
Sabra05G0117400 Salix brachista HOM05D000138 ORTHO05D000078 1.7e-08 63.9 127 37.0
THA.LOC104799831 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 1.7e-08 63.9 91 46.2
CAN.G1559.1 Capsicum annuum HOM05D000138 ORTHO05D000078 2.2e-08 63.5 111 41.4
MD08G1077100 Malus domestica HOM05D000138 ORTHO05D000078 2.2e-08 63.5 96 47.9
Glyma.05G108600 Glycine max HOM05D000138 ORTHO05D000078 2.9e-08 63.2 103 40.8
PGSC0003DMG400004921 Solanum tuberosum HOM05D000138 ORTHO05D000078 2.9e-08 63.2 124 37.1
Cpa.g.sc160.33 Carica papaya HOM05D000138 ORTHO05D000078 3.7e-08 62.8 86 47.7
Migut.H00323 Erythranthe guttata HOM05D000138 ORTHO05D000078 4.9e-08 62.4 161 33.5
Hma1.2p1_1678F.1_g297080 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 4.9e-08 62.4 136 37.5
Lalb_Chr11g0063041 Lupinus albus HOM05D000138 ORTHO05D000078 4.9e-08 62.4 157 36.3
unitig_32.g10781 Utricularia gibba HOM05D000138 ORTHO05D000078 4.9e-08 62.4 119 42.0
VMungo0251G0094 Vigna mungo HOM05D000138 ORTHO05D000078 4.9e-08 62.4 120 37.5
MD15G1064600 Malus domestica HOM05D000138 ORTHO05D000078 6.4e-08 62.0 98 45.9
Manes.13G108800 Manihot esculenta HOM05D000138 ORTHO05D000078 6.4e-08 62.0 146 34.9
FAN27G0712 Fragaria x ananassa HOM05D000138 ORTHO05D000078 8.3e-08 61.6 89 48.3
Glyma.17G232290 Glycine max HOM05D000138 ORTHO05D000078 8.3e-08 61.6 125 37.6
Prupe.1G418600 Prunus persica HOM05D000138 ORTHO05D000078 8.3e-08 61.6 92 44.6
THA.LOC104825796 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 8.3e-08 61.6 82 43.9
TPR.G13083 Trifolium pratense HOM05D000138 ORTHO05D000078 8.3e-08 61.6 97 42.3
vmacro21414 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 8.3e-08 61.6 89 47.2
arahy.Tifrunner.gnm1.ann1.7SA24Y Arachis hypogaea HOM05D000138 ORTHO05D000078 1.1e-07 61.2 69 55.1
arahy.Tifrunner.gnm1.ann1.J9H0YQ Arachis hypogaea HOM05D000138 ORTHO05D000078 1.1e-07 61.2 69 55.1
Nitab4.5_0009818g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 1.4e-07 60.8 139 35.3
RcHm_v2.0_Chr6g0310091 Rosa chinensis HOM05D000138 ORTHO05D000078 1.4e-07 60.8 120 42.5
CiPaw.08G052700 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.8e-07 60.5 127 40.2
FAN20G2957 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.8e-07 60.5 89 47.2
Ca_15887_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 2.4e-07 60.1 155 34.8
DCAR_010799 Daucus carota HOM05D000138 ORTHO05D000078 3.2e-07 59.7 118 40.7
Oeu053654.1 Olea europaea HOM05D000138 ORTHO05D000078 3.2e-07 59.7 144 37.5
HPP92_018801 Vanilla planifolia HOM05D000138 ORTHO05D000078 4.1e-07 59.3 132 33.3
Duzib041G0712 Durio zibethinus HOM05D000138 ORTHO05D000078 5.4e-07 58.9 93 44.1
Duzib116G0358 Durio zibethinus HOM05D000138 ORTHO05D000078 5.4e-07 58.9 93 39.8
Glyma.04G047900 Glycine max HOM05D000138 ORTHO05D000078 5.4e-07 58.9 162 34.6
Oeu034344.1 Olea europaea HOM05D000138 ORTHO05D000078 5.4e-07 58.9 114 39.5
Rhsim07G0217000 Rhododendron simsii HOM05D000138 ORTHO05D000078 5.4e-07 58.9 131 37.4
FAN24G3384 Fragaria x ananassa HOM05D000138 ORTHO05D000078 7.0e-07 58.5 89 46.1
SalBow3G4057 Salvia bowleyana HOM05D000138 ORTHO05D000078 7.0e-07 58.5 168 30.4
FAN15G2787 Fragaria x ananassa HOM05D000138 ORTHO05D000078 9.2e-07 58.2 89 46.1
Glyma.06G049200 Glycine max HOM05D000138 ORTHO05D000078 9.2e-07 58.2 119 39.5
Lj1g0019882 Lotus japonicus HOM05D000138 ORTHO05D000078 9.2e-07 58.2 144 36.1
Medtr3g103460 Medicago truncatula HOM05D000138 ORTHO05D000078 9.2e-07 58.2 122 38.5
VMungo0647G1302 Vigna mungo HOM05D000138 ORTHO05D000078 9.2e-07 58.2 94 41.5
Migut.L00428 Erythranthe guttata HOM05D000138 ORTHO05D000078 1.6e-06 57.4 99 41.4
Zm00001eb117830 Zea mays HOM05D000138 ORTHO05D000078 1.6e-06 57.4 86 41.9
Psat5g043760 Pisum sativum HOM05D000138 ORTHO05D000078 2.0e-06 57.0 174 36.2
HPP92_018792 Vanilla planifolia HOM05D000138 ORTHO05D000078 2.7e-06 56.6 132 32.6
ClCG05G026520 Citrullus lanatus HOM05D000138 ORTHO05D000078 3.5e-06 56.2 99 40.4
Medtr4g097520 Medicago truncatula HOM05D000138 ORTHO05D000078 3.5e-06 56.2 132 34.8
ECA232G1461 Erigeron canadensis HOM05D000138 ORTHO05D000078 4.6e-06 55.8 87 43.7
Os07g0124700 Oryza sativa ssp. japonica HOM05D000138 ORTHO05D000078 4.6e-06 55.8 77 46.8
Phvul.001G031200 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 4.6e-06 55.8 96 41.7
unitig_748.g8385 Utricularia gibba HOM05D000138 ORTHO05D000078 4.6e-06 55.8 134 38.8
HPP92_010616 Vanilla planifolia HOM05D000138 ORTHO05D000078 4.6e-06 55.8 88 38.6
CSS0002128 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 7.8e-06 55.1 93 44.1
MBI08_g09146_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D030033 7.8e-06 55.1 98 36.7


User provided reference genes

Program Settings