Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06910 Brassica carinata HOM05D000339 ORTHO05D000212 7.7e-85 317.0 149 100.0
C09p13670 Brassica napus HOM05D000339 ORTHO05D000212 1.4e-81 306.2 144 100.0
A09p11630 Brassica napus HOM05D000339 ORTHO05D000212 2.7e-77 292.0 144 96.5
BraA09t36809Z Brassica rapa HOM05D000339 ORTHO05D000212 2.7e-77 292.0 144 96.5
BolC9t54257H Brassica oleracea HOM05D000339 ORTHO05D000212 4.2e-75 284.6 144 95.1
BcaB07g31699 Brassica carinata HOM05D000339 ORTHO05D000212 7.5e-72 273.9 144 90.3
Sp3g31370 Schrenkiella parvula HOM05D000339 ORTHO05D000212 6.8e-65 250.8 144 85.4
BcaB03g16575 Brassica carinata HOM05D000339 ORTHO05D000212 1.3e-60 236.5 145 79.3
BraA07t28097Z Brassica rapa HOM05D000339 ORTHO05D000212 8.6e-60 233.8 146 79.5
BcaC06g36343 Brassica carinata HOM05D000339 ORTHO05D000212 2.3e-57 225.7 146 78.1
A07p03000 Brassica napus HOM05D000339 ORTHO05D000212 2.3e-57 225.7 154 74.7
BolC3t18144H Brassica oleracea HOM05D000339 ORTHO05D000212 4.4e-56 221.5 137 78.1
BraA06t26281Z Brassica rapa HOM05D000339 ORTHO05D000212 9.8e-56 220.3 137 78.1
BcaB08g34777 Brassica carinata HOM05D000339 ORTHO05D000212 1.3e-55 219.9 136 79.4
A06p33490 Brassica napus HOM05D000339 ORTHO05D000212 1.1e-54 216.9 137 77.4
C07p05130 Brassica napus HOM05D000339 ORTHO05D000212 1.4e-54 216.5 139 78.4
C03p58850 Brassica napus HOM05D000339 ORTHO05D000212 1.8e-54 216.1 137 76.6
CARHR108430 Cardamine hirsuta HOM05D000339 ORTHO05D000212 3.1e-49 198.7 147 70.1
AT2G17950 Arabidopsis thaliana HOM05D000339 ORTHO05D000212 1.1e-43 180.3 136 71.3
Thhalv10023091m.g Eutrema salsugineum HOM05D000339 ORTHO05D000212 2.5e-43 179.1 120 76.7
AL3G50980 Arabidopsis lyrata HOM05D000339 ORTHO05D000212 6.2e-42 174.5 136 68.4
Carub.0003s3208 Capsella rubella HOM05D000339 ORTHO05D000212 5.2e-41 171.4 140 67.1
Aa31LG8G15120 Aethionema arabicum HOM05D000339 ORTHO05D000212 3.8e-31 138.7 127 60.6
THA.LOC104807845 Tarenaya hassleriana HOM05D000339 ORTHO05D000212 2.7e-29 132.5 170 51.2
AL3G46010 Arabidopsis lyrata HOM05D000869 ORTHO05D000212 3.6e-26 122.1 96 61.5
AL4G17300 Arabidopsis lyrata HOM05D000869 ORTHO05D000685 3.6e-26 122.1 96 61.5
AL6G22250 Arabidopsis lyrata HOM05D000869 ORTHO05D000685 3.1e-25 119.0 96 60.4
AL2G23370 Arabidopsis lyrata HOM05D000869 ORTHO05D000685 5.8e-24 114.8 103 58.3
AL5G20950 Arabidopsis lyrata HOM05D000339 ORTHO05D000212 3.8e-23 112.1 89 61.8
AL1G55170 Arabidopsis lyrata HOM05D000869 ORTHO05D000685 2.1e-10 69.7 50 64.0
Cpa.g.sc6.244 Carica papaya HOM05D000339 ORTHO05D000212 1.3e-07 60.5 115 36.5


User provided reference genes

Program Settings