Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 5.1e-287 990.3 484 100.0
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 3.1e-260 901.4 486 92.4
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 3.1e-260 901.4 486 92.4
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 9.0e-260 899.8 484 92.4
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 1.7e-258 895.6 484 91.9
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 9.3e-257 889.8 499 88.0
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 5.5e-249 864.0 490 87.8
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 3.6e-248 861.3 486 87.4
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 4.6e-248 860.9 484 88.0
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 7.9e-248 860.1 488 88.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 1.4e-247 859.4 484 88.4
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 2.6e-246 855.1 490 87.1
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 4.4e-246 854.4 490 86.9
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 1.2e-243 846.3 490 87.3
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 3.4e-243 844.7 499 85.0
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.0e-242 843.2 488 86.7
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 3.7e-237 824.7 490 82.9
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 2.0e-214 749.2 488 76.6
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 1.8e-212 742.7 437 86.0
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.0e-207 726.9 500 70.4
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 5.4e-204 714.5 484 71.3
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 5.4e-204 714.5 500 69.4
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 2.0e-203 712.6 493 68.8
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 3.5e-203 711.8 495 70.3
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 4.6e-203 711.4 491 69.7
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 1.0e-202 710.3 491 69.2
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 5.0e-202 708.0 486 68.7
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 2.5e-201 705.7 493 70.4
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.3e-201 704.1 487 69.6
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 7.3e-201 704.1 493 69.4
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 9.5e-201 703.7 493 70.2
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 9.5e-201 703.7 487 69.6
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.2e-200 703.4 488 70.3
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 1.2e-200 703.4 496 69.8
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 2.8e-200 702.2 493 69.2
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 3.6e-200 701.8 497 68.4
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.6e-200 701.8 487 69.4
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 4.7e-200 701.4 488 70.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 6.2e-200 701.0 485 69.7
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.1e-199 700.3 496 68.5
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.1e-199 700.3 496 68.8
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 1.4e-199 699.9 491 68.6
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 2.3e-199 699.1 493 68.6
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 3.1e-199 698.7 487 68.6
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 5.2e-199 698.0 487 69.0
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 8.9e-199 697.2 504 67.3
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 2.6e-198 695.7 504 67.1
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 2.6e-198 695.7 496 68.5
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.6e-198 695.7 494 68.2
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.4e-198 694.9 487 69.0
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 5.8e-198 694.5 488 69.5
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 5.8e-198 694.5 499 69.5
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 7.5e-198 694.1 486 70.8
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 1.3e-197 693.3 527 64.5
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.7e-197 691.8 493 68.6
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 3.7e-197 691.8 496 68.3
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.7e-197 691.8 492 68.9
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 4.9e-197 691.4 493 67.7
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 8.3e-197 690.6 489 69.5
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 8.3e-197 690.6 489 68.5
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 1.1e-196 690.3 493 68.2
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 1.4e-196 689.9 490 69.6
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 2.4e-196 689.1 492 67.9
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 7.0e-196 687.6 493 69.0
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 2.7e-195 685.6 492 67.9
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 2.7e-195 685.6 495 68.9
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 3.5e-195 685.3 488 68.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.5e-195 685.3 487 68.0
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 4.6e-195 684.9 500 66.4
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 6.0e-195 684.5 485 68.0
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 6.0e-195 684.5 489 69.1
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 7.8e-195 684.1 484 68.4
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 7.8e-195 684.1 489 67.9
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 1.0e-194 683.7 518 65.6
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.3e-194 683.3 489 67.3
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.7e-194 682.9 493 67.3
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 3.0e-194 682.2 507 67.3
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 5.0e-194 681.4 494 67.2
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 5.0e-194 681.4 493 68.4
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 5.0e-194 681.4 484 68.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 6.6e-194 681.0 500 66.6
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 8.6e-194 680.6 490 67.6
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 5.6e-193 677.9 474 68.8
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 6.2e-192 674.5 492 67.5
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 1.4e-191 673.3 572 60.5
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 2.3e-191 672.5 482 67.8
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 2.6e-190 669.1 494 66.0
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.4e-190 668.3 465 70.3
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 5.8e-190 667.9 497 66.8
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.7e-189 665.2 476 68.5
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 3.2e-188 662.1 497 65.6
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 4.6e-187 658.3 583 58.5
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.3e-186 656.8 488 66.8
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 3.9e-186 655.2 491 65.2
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 6.6e-186 654.4 500 63.8
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 1.1e-185 653.7 487 65.3
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.4e-183 646.7 496 65.3
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 4.4e-182 641.7 568 58.5
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 4.1e-180 635.2 361 88.1
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 3.9e-178 628.6 412 72.6
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.9e-177 626.3 549 59.0
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 2.5e-177 625.9 412 73.8
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 2.5e-177 625.9 484 62.0
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.2e-176 623.6 333 92.5
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 3.6e-176 622.1 325 93.5
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 5.2e-175 618.2 577 56.5
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.1e-172 610.5 487 62.6
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 4.2e-172 608.6 602 54.2
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.8e-165 585.5 374 73.3
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 2.1e-163 579.7 489 58.7
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 2.5e-161 572.8 361 76.7
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.8e-160 569.3 327 87.8
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 3.7e-160 568.9 452 62.2
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 6.2e-160 568.2 431 63.3
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 4.0e-151 538.9 327 79.2
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.0e-151 538.9 327 77.4
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 1.7e-149 533.5 489 53.8
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.1e-148 530.8 502 53.2
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 9.3e-148 527.7 382 65.4
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.6e-147 526.9 327 76.1
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 5.1e-146 521.9 382 64.9
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 6.5e-141 505.0 328 74.7
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 2.3e-138 496.5 351 68.4
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.5e-134 483.8 489 51.5
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 6.7e-130 468.4 351 66.1
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.7e-115 419.9 305 67.2
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.5e-89 332.0 201 77.6
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 4.9e-88 329.3 451 40.8
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.9e-87 327.4 210 73.3
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 5.6e-84 315.8 403 43.2
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 5.6e-84 315.8 433 41.6
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 8.1e-75 285.4 186 72.6
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.4e-73 279.6 159 82.4
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.4e-73 279.6 159 82.4
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.1e-70 270.8 159 81.1
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 5.1e-69 266.2 232 55.6
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 5.2e-66 256.1 145 77.9
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.7e-46 190.7 415 30.8
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 3.9e-45 186.8 119 79.0
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.4e-42 178.3 106 79.2
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.0e-42 176.8 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.0e-42 175.6 93 88.2
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.8e-41 172.9 106 80.2
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.3e-29 135.2 91 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 2.9e-24 117.5 143 45.5
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 1.0e-16 92.4 87 51.7
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 6.5e-16 89.7 70 62.9
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.5e-16 89.4 76 60.5
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 7.2e-15 86.3 69 63.8
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.9e-08 64.3 44 61.4
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 1.1e-07 62.4 130 33.8
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.2e-07 59.7 44 59.1
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 3.6e-06 57.4 34 70.6


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