Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.7e-41 172.2 84 100.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.7e-41 172.2 84 100.0
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 2.8e-39 164.9 84 94.0
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 3.6e-39 164.5 84 95.2
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 8.0e-39 163.3 84 94.0
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.3e-38 161.8 84 92.9
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.3e-38 161.8 84 92.9
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 1.6e-34 149.1 84 83.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 7.8e-34 146.7 84 79.8
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 1.0e-33 146.4 84 79.8
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 2.3e-33 145.2 85 82.4
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 3.0e-33 144.8 84 82.1
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 1.6e-31 139.0 84 78.6
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 2.1e-31 138.7 85 78.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 2.8e-31 138.3 84 77.4
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 6.2e-31 137.1 85 77.6
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 6.2e-31 137.1 84 77.4
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 1.1e-30 136.3 84 77.4
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 1.1e-30 136.3 84 76.2
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 1.8e-30 135.6 84 76.2
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.3e-30 135.2 84 76.2
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 3.1e-30 134.8 84 76.2
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 4.0e-30 134.4 84 75.0
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.0e-30 134.4 84 75.0
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.2e-30 134.0 84 73.8
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 5.2e-30 134.0 84 73.8
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 6.8e-30 133.7 84 73.8
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 6.8e-30 133.7 84 73.8
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 8.9e-30 133.3 84 76.2
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.5e-29 132.5 84 73.8
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.6e-29 131.7 84 75.0
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 2.6e-29 131.7 84 73.8
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 3.4e-29 131.3 84 72.6
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 3.4e-29 131.3 84 72.6
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 3.4e-29 131.3 84 73.8
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 4.4e-29 131.0 83 75.9
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 4.4e-29 131.0 82 73.2
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 5.8e-29 130.6 84 73.8
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 5.8e-29 130.6 84 75.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 5.8e-29 130.6 84 72.6
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 5.8e-29 130.6 84 73.8
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 7.5e-29 130.2 84 72.6
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 7.5e-29 130.2 84 72.6
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 9.8e-29 129.8 84 72.6
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.3e-28 129.4 84 70.2
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 1.3e-28 129.4 84 71.4
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.7e-28 129.0 84 72.6
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 1.7e-28 129.0 84 73.8
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.7e-28 129.0 84 71.4
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 2.2e-28 128.6 84 73.8
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 2.2e-28 128.6 83 69.9
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.2e-28 128.6 84 73.8
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.2e-28 128.6 84 71.4
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.9e-28 128.3 84 72.6
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 3.7e-28 127.9 84 71.4
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 3.7e-28 127.9 84 69.0
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.9e-28 127.5 80 75.0
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 4.9e-28 127.5 84 69.0
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.9e-28 127.5 84 72.6
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.9e-28 127.5 83 73.5
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 8.3e-28 126.7 84 69.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.4e-27 125.9 84 67.9
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.4e-27 125.9 84 72.6
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.4e-27 125.9 84 69.0
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 2.4e-27 125.2 77 75.3
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.4e-27 125.2 84 70.2
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.4e-27 125.2 84 70.2
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 2.4e-27 125.2 77 74.0
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 3.2e-27 124.8 84 67.9
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 3.2e-27 124.8 84 69.0
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 4.1e-27 124.4 84 70.2
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 4.1e-27 124.4 83 71.1
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.4e-27 124.0 81 72.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.4e-27 124.0 77 74.0
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 7.0e-27 123.6 84 71.4
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.2e-26 122.9 80 70.0
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.2e-26 122.9 80 70.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.2e-26 122.9 85 70.6
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 1.2e-26 122.9 84 69.0
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 2.0e-26 122.1 84 71.4
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 2.0e-26 122.1 84 69.0
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 2.0e-26 122.1 84 69.0
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 2.7e-26 121.7 84 70.2
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.7e-26 121.7 85 69.4
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 2.7e-26 121.7 82 70.7
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 2.7e-26 121.7 84 65.5
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 3.5e-26 121.3 84 71.4
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 3.5e-26 121.3 84 72.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 3.5e-26 121.3 81 71.6
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.6e-26 120.9 83 69.9
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 6.0e-26 120.6 97 62.9
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.3e-25 119.4 84 70.2
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 3.0e-25 118.2 84 64.3
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 5.0e-25 117.5 84 69.0
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.6e-25 116.7 84 65.5
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 8.6e-25 116.7 84 69.0
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.5e-24 115.9 84 67.9
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 2.5e-24 115.2 69 75.4
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 9.5e-24 113.2 84 66.7
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.2e-23 112.8 72 70.8
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.2e-23 112.8 84 61.9
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.6e-23 112.5 80 68.8
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 2.1e-23 112.1 69 72.5
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 4.7e-23 110.9 75 66.7
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.4e-22 109.4 72 69.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 3.1e-22 108.2 80 63.8
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.2e-21 106.3 84 57.1
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 2.6e-21 105.1 76 65.8
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 4.9e-20 100.9 70 65.7
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 4.6e-18 94.4 59 72.9
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.3e-17 92.8 60 71.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.7e-17 92.4 77 57.1
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 2.1e-15 85.5 77 49.4
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.2e-15 84.0 70 62.9


User provided reference genes

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