Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06774 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-73 280.4 186 100.0
BcaC04g22859 Brassica carinata HOM05D000051 ORTHO05D000015 4.1e-67 258.5 175 100.0
BcaC03g14212 Brassica carinata HOM05D000051 ORTHO05D000015 4.5e-34 148.7 187 51.3
C02p15120 Brassica napus HOM05D000051 ORTHO05D000015 4.5e-34 148.7 187 51.3
BolC2t07629H Brassica oleracea HOM05D000051 ORTHO05D000015 4.5e-34 148.7 187 51.3
BraA02t05968Z Brassica rapa HOM05D000051 ORTHO05D000015 7.2e-32 141.4 187 49.7
C09p48160 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-31 138.7 183 48.6
BolC9t57667H Brassica oleracea HOM05D000051 ORTHO05D000015 4.7e-31 138.7 183 48.6
BcaC04g20074 Brassica carinata HOM05D000051 ORTHO05D016723 1.8e-30 136.7 113 67.3
Carub.0008s1704 Capsella rubella HOM05D000051 ORTHO05D000015 2.4e-27 126.3 109 60.6
Thhalv10016046m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.5e-26 122.1 108 63.0
AT5G56560 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.9e-26 121.7 107 60.7
A10p13930 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-25 119.8 98 67.3
BraA10t43485Z Brassica rapa HOM05D000051 ORTHO05D000015 2.3e-25 119.8 98 67.3
BcaC03g14213 Brassica carinata HOM05D000051 ORTHO05D016723 5.0e-25 118.6 182 42.9
AL8G32380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-24 117.1 109 57.8
C03p15580 Brassica napus HOM05D000051 ORTHO05D000015 2.5e-24 116.3 111 61.3
C02p15130 Brassica napus HOM05D000051 ORTHO05D000015 1.6e-23 113.6 109 58.7
BolC2t07630H Brassica oleracea HOM05D000051 ORTHO05D000015 1.6e-23 113.6 109 58.7
BraA03t10612Z Brassica rapa HOM05D000051 ORTHO05D016723 2.3e-22 109.8 108 57.4
Carub.0008s1705 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-21 107.1 107 56.1
BcaC01g06432 Brassica carinata HOM05D000051 ORTHO05D016723 2.6e-21 106.3 81 71.6
BolC3t13995H Brassica oleracea HOM05D000051 ORTHO05D000015 2.6e-21 106.3 81 71.6
A03p13320 Brassica napus HOM05D000051 ORTHO05D016723 9.8e-21 104.4 81 70.4
BraA03t10643Z Brassica rapa HOM05D000051 ORTHO05D000015 9.8e-21 104.4 81 70.4
CARHR270260 Cardamine hirsuta HOM05D000051 ORTHO05D000015 9.8e-21 104.4 104 53.8
AL8G32390 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-20 103.6 109 54.1
BcaB08g36023 Brassica carinata HOM05D000051 ORTHO05D000015 4.9e-20 102.1 108 54.6
BcaB08g36019 Brassica carinata HOM05D000051 ORTHO05D016723 3.5e-18 95.9 88 61.4
BcaC01g06461 Brassica carinata HOM05D000051 ORTHO05D000015 1.0e-17 94.4 82 63.4
A02p09000 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-16 90.9 148 40.5
BraA02t05969Z Brassica rapa HOM05D000051 ORTHO05D000015 2.5e-16 89.7 146 41.1
AT5G56570 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.6e-16 88.6 107 47.7
CARHR270250 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.6e-15 85.9 102 52.0
Thhalv10023981m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.7e-15 85.5 105 50.5
CARHR271030 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.8e-14 81.6 111 47.7
Thhalv10015778m.g Eutrema salsugineum HOM05D000051 ORTHO05D016723 1.5e-13 80.5 62 67.7
Thhalv10015827m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-11 74.3 97 45.4
C03p15700 Brassica napus HOM05D000051 ORTHO05D000015 3.2e-11 72.8 107 45.8
BolC3t14004H Brassica oleracea HOM05D000051 ORTHO05D000015 3.2e-11 72.8 107 45.8
A03p13430 Brassica napus HOM05D000051 ORTHO05D000015 1.2e-10 70.9 107 44.9
BraA08t32312Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-10 70.1 108 40.7
Aa31LG3G5180 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.7e-10 69.7 97 43.3
Thhalv10029438m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 3.0e-09 66.2 105 40.0
Aa31LG3G3750 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.9e-09 65.9 104 35.6
C09p06510 Brassica napus HOM05D000051 ORTHO05D000015 5.0e-09 65.5 108 38.0
CARHR269860 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.0e-09 65.5 112 38.4
A09p05930 Brassica napus HOM05D000051 ORTHO05D000015 6.6e-09 65.1 108 38.0
C06p06190 Brassica napus HOM05D000051 ORTHO05D000015 6.6e-09 65.1 108 38.0
BolC6t35730H Brassica oleracea HOM05D000051 ORTHO05D000015 6.6e-09 65.1 108 38.0
BraA09t36235Z Brassica rapa HOM05D000051 ORTHO05D000015 6.6e-09 65.1 108 38.0
TWI53G1227 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 6.6e-09 65.1 107 41.1
C03p15200 Brassica napus HOM05D000051 ORTHO05D000015 8.6e-09 64.7 139 33.8
BraA03t10649Z Brassica rapa HOM05D000051 ORTHO05D000015 8.6e-09 64.7 112 42.9
BraA06t23484Z Brassica rapa HOM05D000051 ORTHO05D000015 8.6e-09 64.7 108 38.0
A06p02770 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 64.3 108 38.0
C06p06200 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 64.3 108 38.0
BolC6t35731H Brassica oleracea HOM05D000051 ORTHO05D000015 1.1e-08 64.3 108 38.0
A03p13410 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-08 63.5 109 38.5
C03p90080 Brassica napus HOM05D000051 ORTHO05D000015 3.3e-08 62.8 108 38.9
BolC3t21329H Brassica oleracea HOM05D000051 ORTHO05D000015 3.3e-08 62.8 108 38.9
BraA03t10647Z Brassica rapa HOM05D000051 ORTHO05D000015 3.3e-08 62.8 109 38.5
A06p02760 Brassica napus HOM05D000051 ORTHO05D000015 4.3e-08 62.4 108 37.0
BraA06t23483Z Brassica rapa HOM05D000051 ORTHO05D000015 4.3e-08 62.4 108 37.0
Carub.0001s3995 Capsella rubella HOM05D000051 ORTHO05D000015 4.3e-08 62.4 108 38.0
AL1G58820 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.6e-08 62.0 106 37.7
Carub.0007s2887 Capsella rubella HOM05D000051 ORTHO05D000015 5.6e-08 62.0 106 40.6
CARHR269850 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.3e-08 61.6 111 38.7
Aa31LG3G3830 Aethionema arabicum HOM05D000051 ORTHO05D000015 9.5e-08 61.2 97 37.1
AL1G58790 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 9.5e-08 61.2 103 38.8
BcaC01g06425 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-07 60.8 93 44.1
BcaC01g06427 Brassica carinata HOM05D000051 ORTHO05D000015 1.2e-07 60.8 112 39.3
BcaB06g26116 Brassica carinata HOM05D000051 ORTHO05D000015 1.6e-07 60.5 108 38.0
BraA03t10650Z Brassica rapa HOM05D000051 ORTHO05D000015 2.1e-07 60.1 93 43.0
Aa31LG3G12320 Aethionema arabicum HOM05D000051 ORTHO05D000015 2.8e-07 59.7 112 33.9
A03p13440 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-07 59.7 93 43.0
C03p15720 Brassica napus HOM05D000051 ORTHO05D000015 2.8e-07 59.7 93 44.1
BolC3t14005H Brassica oleracea HOM05D000051 ORTHO05D000015 2.8e-07 59.7 93 44.1
Carub.0002s0721 Capsella rubella HOM05D000051 ORTHO05D000015 2.8e-07 59.7 106 38.7
Aa31LG3G5160 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.6e-07 59.3 98 38.8
BcaB07g33540 Brassica carinata HOM05D024503 ORTHO05D000015 3.6e-07 59.3 108 38.0
A02p12230 Brassica napus HOM05D000051 ORTHO05D000015 4.7e-07 58.9 91 42.9
AL8G32310 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.2e-07 58.5 110 36.4
C09p41740 Brassica napus HOM05D000051 ORTHO05D000015 6.2e-07 58.5 109 37.6
BolC9t57060H Brassica oleracea HOM05D000051 ORTHO05D000015 6.2e-07 58.5 109 37.6
Carub.0008s1689 Capsella rubella HOM05D000051 ORTHO05D000015 6.2e-07 58.5 104 34.6
AT5G62970 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 8.0e-07 58.2 107 39.3
A04p18670 Brassica napus HOM05D000088 ORTHO05D002762 8.0e-07 58.2 102 36.3
C03p15670 Brassica napus HOM05D000051 ORTHO05D000015 8.0e-07 58.2 92 40.2
BraA10t43079Z Brassica rapa HOM05D000051 ORTHO05D000015 8.0e-07 58.2 109 38.5
CARHR041040 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.4e-06 57.4 96 40.6
C02p20330 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 57.0 91 41.8
C02p20350 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 57.0 91 41.8
BolC2t08167H Brassica oleracea HOM05D000051 ORTHO05D000015 1.8e-06 57.0 91 41.8
Carub.0004s0736 Capsella rubella HOM05D000051 ORTHO05D000015 1.8e-06 57.0 103 38.8
CARHR269870 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.8e-06 57.0 113 34.5
Thhalv10027331m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.8e-06 57.0 102 41.2
Sp6g13790 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.8e-06 57.0 108 37.0
AT2G26860 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.3e-06 56.6 106 39.6
A02p12250 Brassica napus HOM05D000051 ORTHO05D000015 2.3e-06 56.6 91 41.8
BraA02t06290Z Brassica rapa HOM05D000051 ORTHO05D000015 2.3e-06 56.6 91 41.8
CARHR171110 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.3e-06 56.6 100 36.0
Aa31sc947G30 Aethionema arabicum HOM05D000051 ORTHO05D000015 3.1e-06 56.2 93 40.9
A02p12240 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 56.2 91 41.8
Carub.0008s1674 Capsella rubella HOM05D000051 ORTHO05D000015 3.1e-06 56.2 112 34.8
A02p09100 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-06 55.8 95 43.2
BraA02t05978Z Brassica rapa HOM05D000051 ORTHO05D000015 4.0e-06 55.8 95 43.2
AL7G51940 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 5.2e-06 55.5 90 40.0
CARHR204270 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.2e-06 55.5 109 34.9
CARHR269840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.2e-06 55.5 111 36.0
Sp7g13260 Schrenkiella parvula HOM05D000051 ORTHO05D000015 5.2e-06 55.5 100 39.0
CARHR041060 Cardamine hirsuta HOM05D000051 ORTHO05D000015 6.8e-06 55.1 109 36.7
Thhalv10015365m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.8e-06 55.1 105 43.8
Aa31sc352G40 Aethionema arabicum HOM05D000051 ORTHO05D000015 8.9e-06 54.7 103 38.8
Aa31sc535G10 Aethionema arabicum HOM05D000051 ORTHO05D000015 8.9e-06 54.7 93 40.9
BcaB06g27232 Brassica carinata HOM05D000051 ORTHO05D000015 8.9e-06 54.7 96 37.5
Carub.0008s1691 Capsella rubella HOM05D000051 ORTHO05D000015 8.9e-06 54.7 107 33.6
CARHR269970 Cardamine hirsuta HOM05D000051 ORTHO05D000015 8.9e-06 54.7 96 42.7


User provided reference genes

Program Settings