Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.0e-83 313.5 182 100.0
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 1.3e-78 296.6 182 85.7
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 1.7e-78 296.2 182 85.2
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 1.7e-78 296.2 182 85.7
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 1.5e-77 293.1 182 84.1
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 1.5e-77 293.1 182 84.1
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 4.2e-77 291.6 182 84.1
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 9.4e-77 290.4 182 83.5
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 8.8e-75 283.9 178 86.0
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 8.8e-75 283.9 178 86.0
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 8.8e-75 283.9 182 81.9
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 3.4e-74 282.0 182 81.3
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 9.8e-74 280.4 182 81.3
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 2.2e-73 279.3 182 80.8
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 3.7e-73 278.5 183 81.4
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 1.8e-72 276.2 180 80.0
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 3.1e-72 275.4 181 79.6
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 5.7e-66 254.6 182 80.8
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 8.3e-65 250.8 178 81.5
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 1.8e-59 233.0 189 68.8
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 4.0e-59 231.9 177 70.1
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 4.7e-52 208.4 179 65.4
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 8.0e-52 207.6 186 68.3
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 8.0e-52 207.6 185 63.8
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.0e-51 207.2 182 63.2
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.4e-51 206.8 182 63.2
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 2.3e-51 206.1 181 63.5
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 2.3e-51 206.1 183 63.4
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 2.3e-51 206.1 183 63.4
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 5.2e-51 204.9 180 61.7
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 5.2e-51 204.9 183 62.3
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 6.8e-51 204.5 183 62.3
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 8.9e-51 204.1 182 63.7
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 2.6e-50 202.6 185 62.7
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 3.4e-50 202.2 186 60.8
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 5.8e-50 201.4 181 61.9
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 5.8e-50 201.4 186 61.8
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 9.8e-50 200.7 185 67.0
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 9.8e-50 200.7 199 65.8
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 3.7e-49 198.7 182 61.0
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 6.4e-49 198.0 180 61.1
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 6.4e-49 198.0 201 67.2
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 6.4e-49 198.0 187 59.9
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 8.3e-49 197.6 180 60.6
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 8.3e-49 197.6 179 60.3
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 1.1e-48 197.2 184 60.9
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 1.4e-48 196.8 179 60.3
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 1.9e-48 196.4 190 59.5
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 1.9e-48 196.4 194 59.3
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 1.9e-48 196.4 181 66.3
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.9e-48 196.4 179 60.3
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 1.9e-48 196.4 187 58.8
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 2.4e-48 196.1 189 57.7
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 3.2e-48 195.7 180 62.8
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 3.2e-48 195.7 180 62.2
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 3.2e-48 195.7 184 59.2
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 3.2e-48 195.7 180 62.8
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 3.2e-48 195.7 179 62.6
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 3.2e-48 195.7 180 70.0
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 4.1e-48 195.3 180 60.6
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 4.1e-48 195.3 179 60.9
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 5.4e-48 194.9 183 61.2
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 5.4e-48 194.9 183 61.2
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 7.0e-48 194.5 180 59.4
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 1.2e-47 193.7 181 59.7
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 1.2e-47 193.7 183 58.5
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 1.2e-47 193.7 187 59.4
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.6e-47 193.4 181 60.8
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 1.6e-47 193.4 179 59.2
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 2.0e-47 193.0 179 62.0
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 2.0e-47 193.0 180 58.9
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 2.7e-47 192.6 184 59.2
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 2.7e-47 192.6 194 58.2
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.5e-47 192.2 190 56.8
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 3.5e-47 192.2 175 64.6
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 4.6e-47 191.8 187 59.9
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 4.6e-47 191.8 190 56.8
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 6.0e-47 191.4 184 58.7
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 7.8e-47 191.0 185 58.4
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 7.8e-47 191.0 183 65.0
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 7.8e-47 191.0 183 61.2
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.3e-46 190.3 190 56.3
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 1.3e-46 190.3 175 60.6
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 2.3e-46 189.5 191 66.0
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 2.3e-46 189.5 183 59.6
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 2.3e-46 189.5 179 60.3
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 3.0e-46 189.1 179 59.2
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 3.0e-46 189.1 179 59.2
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 3.0e-46 189.1 185 58.9
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 5.0e-46 188.3 190 55.8
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 8.6e-46 187.6 198 55.6
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 1.1e-45 187.2 189 65.1
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 1.9e-45 186.4 181 56.9
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 3.3e-45 185.7 182 57.7
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 4.3e-45 185.3 131 73.3
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.6e-45 184.9 178 59.0
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 1.2e-44 183.7 180 58.9
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 2.1e-44 183.0 135 70.4
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 2.1e-44 183.0 179 57.0
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 2.8e-44 182.6 153 65.4
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 4.7e-44 181.8 179 55.9
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 4.7e-44 181.8 178 64.0
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 5.2e-43 178.3 135 64.4
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 5.2e-43 178.3 190 57.4
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.5e-42 176.8 179 58.1
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 2.0e-42 176.4 189 57.1
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 2.0e-42 176.4 144 66.7
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 1.1e-40 170.6 110 75.5
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 2.4e-40 169.5 190 51.6
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 1.6e-39 166.8 115 77.4
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.6e-39 166.8 190 53.7
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 2.7e-39 166.0 132 66.7
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 4.6e-39 165.2 160 65.0
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 9.5e-37 157.5 130 58.5
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 1.6e-36 156.8 164 54.9
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.2e-34 150.6 138 60.9
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 3.4e-34 149.1 90 82.2
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 1.7e-33 146.7 141 68.8
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 2.9e-33 146.0 196 45.4
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 1.9e-32 143.3 139 58.3
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 3.2e-32 142.5 106 67.0
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 4.1e-32 142.1 189 44.4
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 8.1e-28 127.9 111 64.9
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 1.4e-27 127.1 107 60.7
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 2.4e-27 126.3 108 60.2
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 3.1e-27 125.9 117 59.0
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 8.9e-27 124.4 121 56.2
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 2.6e-26 122.9 101 62.4
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 5.8e-26 121.7 101 61.4
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 7.6e-26 121.3 126 55.6
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 2.2e-25 119.8 96 67.7
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 1.1e-24 117.5 105 59.0
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 2.4e-24 116.3 104 58.7
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 6.6e-22 108.2 110 50.9
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 2.5e-21 106.3 104 54.8
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 5.6e-21 105.1 107 55.1
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.6e-20 103.6 104 51.0
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 2.1e-20 103.2 177 40.1
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 6.2e-20 101.7 106 52.8
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.1e-19 100.9 88 67.0
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 1.8e-19 100.1 130 47.7
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 5.3e-19 98.6 82 57.3
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 2.0e-18 96.7 96 49.0
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 7.6e-18 94.7 80 57.5
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 1.7e-17 93.6 69 65.2
Gohir.A02G143100 Gossypium hirsutum HOM05D004626 ORTHO05D005185 7.1e-16 88.2 64 71.9
Gohir.D03G037250 Gossypium hirsutum HOM05D004626 ORTHO05D005185 3.5e-15 85.9 67 67.2
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 4.6e-15 85.5 119 47.1
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 1.0e-14 84.3 113 41.6
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 1.0e-14 84.3 81 55.6
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 9.6e-13 77.8 94 45.7
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 6.2e-12 75.1 138 34.8
AL1G34190 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 6.0e-07 58.5 123 37.4
AL8G34840 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 6.0e-07 58.5 123 37.4
AL1G23700 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 7.9e-07 58.2 74 48.6
AL855U10020 Arabidopsis lyrata HOM05D017491 ORTHO05D005185 7.9e-07 58.2 74 48.6


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